Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0004919 Camellia sinensis var. sinensis HOM05D005449 ORTHO05D006916 2.7e-71 271.9 142 100.0
Hma1.2p1_1986F.1_g310070 Hydrangea macrophylla HOM05D005449 ORTHO05D006916 7.1e-64 247.3 142 89.4
Hma1.2p1_2044F.1_g312372 Hydrangea macrophylla HOM05D005449 ORTHO05D006916 7.1e-64 247.3 142 89.4
Dinv33060 Davidia involucrata HOM05D005449 ORTHO05D006916 4.6e-63 244.6 142 87.3
Cfa005902 Carpinus fangiana HOM05D005449 ORTHO05D006916 1.0e-62 243.4 142 86.6
QL12p028306 Quercus lobata HOM05D005449 ORTHO05D006916 3.9e-62 241.5 141 86.5
Rhsim06G0059700 Rhododendron simsii HOM05D005449 ORTHO05D006916 3.9e-62 241.5 136 89.7
vmacro09952 Vaccinium macrocarpon HOM05D005449 ORTHO05D006916 3.7e-60 235.0 166 75.3
Dinv44016 Davidia involucrata HOM05D005449 ORTHO05D006916 6.3e-60 234.2 142 86.6
TAR636G0282 Trochodendron aralioides HOM05D005449 ORTHO05D006916 4.1e-59 231.5 142 84.5
CsaV3_4G000480 Cucumis sativus L. HOM05D005449 ORTHO05D006916 1.2e-58 229.9 142 81.0
CiPaw.07G110200 Carya illinoinensis HOM05D005449 ORTHO05D006916 2.0e-58 229.2 142 84.5
MELO3C017987.2 Cucumis melo HOM05D005449 ORTHO05D006916 2.6e-58 228.8 142 81.0
Prupe.8G140700 Prunus persica HOM05D005449 ORTHO05D006916 4.5e-58 228.0 143 81.8
Actinidia21206 Actinidia chinensis HOM05D005449 ORTHO05D006916 2.2e-57 225.7 136 85.3
MD05G1096300 Malus domestica HOM05D005449 ORTHO05D006916 5.0e-57 224.6 142 81.0
Sed0024679 Sechium edule HOM05D005449 ORTHO05D006916 6.5e-57 224.2 142 80.3
CiPaw.08G094600 Carya illinoinensis HOM05D005449 ORTHO05D006916 8.5e-57 223.8 142 78.9
Eucgr.F02473 Eucalyptus grandis HOM05D005449 ORTHO05D006916 1.1e-56 223.4 142 81.0
CANSAT25G1565 Cannabis sativa HOM05D005449 ORTHO05D006916 3.2e-56 221.9 142 79.6
Rhsim09G0186400 Rhododendron simsii HOM05D005449 ORTHO05D006916 3.2e-56 221.9 163 74.2
DCAR_002842 Daucus carota HOM05D005449 ORTHO05D006916 2.1e-55 219.2 142 81.7
ClCG10G010560 Citrullus lanatus HOM05D005449 ORTHO05D006916 2.7e-55 218.8 154 75.3
Nn3g21512 Nelumbo nucifera HOM05D005449 ORTHO05D006916 2.7e-55 218.8 142 82.4
MSTRG.21637 Avicennia marina HOM05D005449 ORTHO05D006916 3.6e-55 218.4 142 81.7
Manes.05G061600 Manihot esculenta HOM05D005449 ORTHO05D006916 7.9e-55 217.2 146 80.8
TWI14G0435 Tripterygium wilfordii HOM05D005449 ORTHO05D006916 7.9e-55 217.2 133 83.5
Potri.014G127900 Populus trichocarpa HOM05D005449 ORTHO05D006916 6.7e-54 214.2 151 76.8
Oeu054120.1 Olea europaea HOM05D005449 ORTHO05D006916 8.7e-54 213.8 142 80.3
SGA_v2.0_scaffold1G00359 Striga asiatica HOM05D005449 ORTHO05D006916 8.7e-54 213.8 142 80.3
Duzib138G1099 Durio zibethinus HOM05D005449 ORTHO05D006916 1.1e-53 213.4 142 79.6
Migut.D00146 Erythranthe guttata HOM05D005449 ORTHO05D006916 5.7e-53 211.1 142 80.3
Thecc.01G301700 Theobroma cacao HOM05D005449 ORTHO05D006916 5.7e-53 211.1 141 79.4
Glyma.05G185600 Glycine max HOM05D005449 ORTHO05D006916 9.7e-53 210.3 142 75.4
Lj4g0006553 Lotus japonicus HOM05D005449 ORTHO05D006916 1.3e-52 209.9 144 74.3
RcHm_v2.0_Chr6g0252971 Rosa chinensis HOM05D005449 ORTHO05D006916 1.3e-52 209.9 142 77.5
Lsat_1_v5_gn_8_164201 Lactuca sativa HOM05D005449 ORTHO05D006916 1.6e-52 209.5 137 80.3
FAN20G1025 Fragaria x ananassa HOM05D005449 ORTHO05D006916 2.2e-52 209.1 142 76.8
MBI18_g24865_MAGBIO Magnolia biondii HOM05D005449 ORTHO05D006916 2.8e-52 208.8 147 76.9
Oeu024404.1 Olea europaea HOM05D005449 ORTHO05D006916 2.8e-52 208.8 142 79.6
Cc01_g20940 Coffea canephora HOM05D005449 ORTHO05D006916 3.7e-52 208.4 143 78.3
FAN15G2928 Fragaria x ananassa HOM05D005449 ORTHO05D006916 3.7e-52 208.4 142 76.1
RcHm_v2.0_Chr6g0252941 Rosa chinensis HOM05D005449 ORTHO05D006916 3.7e-52 208.4 142 78.2
TWI59G1340 Tripterygium wilfordii HOM05D005449 ORTHO05D006916 4.8e-52 208.0 142 76.8
PGR119G1363 Punica granatum HOM05D005449 ORTHO05D006916 6.3e-52 207.6 135 80.0
Sopen08g023260 Solanum pennellii HOM05D005449 ORTHO05D006916 6.3e-52 207.6 142 78.9
Aqoxy1G00207 Aquilegia oxysepala HOM05D005449 ORTHO05D006916 1.1e-51 206.8 142 76.1
FAN27G2298 Fragaria x ananassa HOM05D005449 ORTHO05D006916 1.1e-51 206.8 142 76.1
Solyc08g074670.3 Solanum lycopersicum HOM05D005449 ORTHO05D006916 1.1e-51 206.8 142 78.2
CAN.G857.16 Capsicum annuum HOM05D005449 ORTHO05D006916 1.8e-51 206.1 142 77.5
Phvul.002G266700 Phaseolus vulgaris HOM05D005449 ORTHO05D006916 1.8e-51 206.1 142 73.9
COL.COLO4_23333 Corchorus olitorius HOM05D005449 ORTHO05D006916 5.3e-51 204.5 142 75.4
FvH4_2g03920 Fragaria vesca HOM05D005449 ORTHO05D006916 5.3e-51 204.5 142 76.1
Sabra14G0095000 Salix brachista HOM05D005449 ORTHO05D006916 5.3e-51 204.5 116 88.8
PGSC0003DMG400018921 Solanum tuberosum HOM05D005449 ORTHO05D006916 6.9e-51 204.1 142 77.5
Ca_17681_v3 Cicer arietinum L. HOM05D005449 ORTHO05D006916 9.1e-51 203.8 144 73.6
Ca_29605_v3 Cicer arietinum L. HOM05D005449 ORTHO05D006916 9.1e-51 203.8 144 73.6
EL10Ac7g17526 Beta vulgaris HOM05D005449 ORTHO05D006916 1.5e-50 203.0 142 73.2
Duzib211G0575 Durio zibethinus HOM05D005449 ORTHO05D006916 3.4e-50 201.8 142 74.6
Medtr8g092180 Medicago truncatula HOM05D005449 ORTHO05D006916 5.9e-50 201.1 146 71.9
HanXRQChr06g0163691 Helianthus annuus HOM05D005449 ORTHO05D006916 7.7e-50 200.7 129 81.4
Nitab4.5_0008438g0020 Nicotiana tabacum HOM05D005449 ORTHO05D006916 7.7e-50 200.7 142 76.1
Ciclev10022754m.g Citrus clementina HOM05D005449 ORTHO05D006916 1.3e-49 199.9 144 76.4
Gohir.D12G133700 Gossypium hirsutum HOM05D005449 ORTHO05D006916 1.3e-49 199.9 143 74.8
Gorai.008G144700 Gossypium raimondii HOM05D005449 ORTHO05D006916 1.3e-49 199.9 143 74.8
Cpa.g.sc9.253 Carica papaya HOM05D005449 ORTHO05D006916 5.0e-49 198.0 131 80.9
GSVIVG01028030001 Vitis vinifera HOM05D005449 ORTHO05D006916 5.0e-49 198.0 111 90.1
ECA236G0849 Erigeron canadensis HOM05D005449 ORTHO05D006916 6.5e-49 197.6 142 74.6
Peaxi162Scf00445g00079 Petunia axillaris HOM05D005449 ORTHO05D006916 8.5e-49 197.2 142 75.4
Gohir.A12G129900 Gossypium hirsutum HOM05D005449 ORTHO05D006916 1.9e-48 196.1 143 73.4
FAN22G2041 Fragaria x ananassa HOM05D005449 ORTHO05D006916 2.5e-48 195.7 120 80.0
FvH4_4g11510 Fragaria vesca HOM05D005449 ORTHO05D006916 4.2e-48 194.9 120 79.2
Nitab4.5_0002276g0010 Nicotiana tabacum HOM05D005449 ORTHO05D006916 4.2e-48 194.9 139 77.0
Peaxi162Scf00045g01343 Petunia axillaris HOM05D005449 ORTHO05D006916 5.5e-48 194.5 142 73.9
Ah.08g213380 Amaranthus hybridus HOM05D005449 ORTHO05D006916 9.4e-48 193.7 128 74.2
PSO675G2222 Papaver somniferum HOM05D005449 ORTHO05D006916 9.4e-48 193.7 142 75.4
RcHm_v2.0_Chr4g0408421 Rosa chinensis HOM05D005449 ORTHO05D006916 2.1e-47 192.6 120 79.2
Hund11156 Selenicereus undatus HOM05D005449 ORTHO05D006916 2.1e-47 192.6 158 69.0
CDE05G2918 Ceratophyllum demersum HOM05D005449 ORTHO05D006916 2.7e-47 192.2 143 72.0
FAN07G2516 Fragaria x ananassa HOM05D005449 ORTHO05D006916 3.6e-47 191.8 120 78.3
Solyc08g005920.3 Solanum lycopersicum HOM05D005449 ORTHO05D006916 1.0e-46 190.3 142 71.8
THA.LOC104817488 Tarenaya hassleriana HOM05D005449 ORTHO05D006916 1.0e-46 190.3 118 83.1
Sopen08g001890 Solanum pennellii HOM05D005449 ORTHO05D006916 1.4e-46 189.9 142 71.1
PGSC0003DMG400004469 Solanum tuberosum HOM05D005449 ORTHO05D006916 3.9e-46 188.3 142 71.1
TPR.G2165 Trifolium pratense HOM05D005449 ORTHO05D006916 5.1e-46 188.0 148 68.2
Glyma.08G143600 Glycine max HOM05D005449 ORTHO05D006916 6.7e-46 187.6 142 68.3
VMungo0251G2862 Vigna mungo HOM05D000587 ORTHO05D000929 1.1e-45 186.8 142 68.3
Lalb_Chr03g0036381 Lupinus albus HOM05D005449 ORTHO05D006916 1.5e-45 186.4 129 75.2
Nitab4.5_0000860g0030 Nicotiana tabacum HOM05D005449 ORTHO05D006916 2.0e-45 186.0 142 73.2
arahy.Tifrunner.gnm1.ann1.X8E93Z Arachis hypogaea HOM05D005449 ORTHO05D006916 4.8e-44 181.4 140 68.6
arahy.Tifrunner.gnm1.ann1.YB8ZH2 Arachis hypogaea HOM05D005449 ORTHO05D006916 4.8e-44 181.4 140 68.6
unitig_26.g10174 Utricularia gibba HOM05D005449 ORTHO05D006916 1.8e-43 179.5 146 66.4
Psat7g049640 Pisum sativum HOM05D005449 ORTHO05D006916 4.1e-43 178.3 146 67.1
Os05g0154900 Oryza sativa ssp. japonica HOM05D005449 ORTHO05D006916 6.9e-43 177.6 141 69.5
ATR0582G023 Amborella trichopoda HOM05D005449 ORTHO05D006916 2.9e-41 172.2 142 65.5
Sc04g0009560 Simmondsia chinensis HOM05D005449 ORTHO05D006916 2.9e-41 172.2 146 62.3
AL5G33630 Arabidopsis lyrata HOM05D005449 ORTHO05D006916 6.5e-41 171.0 136 69.1
AUR62008679 Chenopodium quinoa HOM05D005449 ORTHO05D006916 5.2e-38 161.4 152 61.2
Zm00001eb346090 Zea mays HOM05D005449 ORTHO05D006916 1.5e-37 159.8 118 71.2
Lsat_1_v5_gn_7_53001 Lactuca sativa HOM05D005449 ORTHO05D006916 9.7e-37 157.1 129 69.8
HPP92_010681 Vanilla planifolia HOM05D005449 ORTHO05D006916 1.2e-34 150.2 142 61.3
RcHm_v2.0_Chr6g0264541 Rosa chinensis HOM05D005449 ORTHO05D006916 3.5e-34 148.7 105 76.2
Atru.chr5.1135 Acer truncatum HOM05D005449 ORTHO05D006916 1.0e-33 147.1 135 63.7
AUR62025565 Chenopodium quinoa HOM05D005449 ORTHO05D006916 5.0e-33 144.8 138 59.4
Haze_04950 Corylus avellana HOM05D005449 ORTHO05D006916 8.5e-33 144.1 83 86.7
CARHR162730 Cardamine hirsuta HOM05D005449 ORTHO05D006916 1.5e-32 143.3 119 67.2
BcaB01g00336 Brassica carinata HOM05D005449 ORTHO05D006916 1.9e-32 142.9 136 61.0
Carub.0005s1933 Capsella rubella HOM05D005449 ORTHO05D006916 2.5e-32 142.5 154 56.5
AT3G52860 Arabidopsis thaliana HOM05D005449 ORTHO05D006916 3.2e-32 142.1 103 73.8
Pp3c14_5880 Physcomitrium patens HOM05D005449 ORTHO05D006916 5.5e-32 141.4 117 62.4
Sp5g09480 Schrenkiella parvula HOM05D005449 ORTHO05D006916 5.5e-32 141.4 84 85.7
A09p45940 Brassica napus HOM05D005449 ORTHO05D006916 7.2e-32 141.0 136 60.3
BolC8t50425H Brassica oleracea HOM05D005449 ORTHO05D006916 7.2e-32 141.0 136 60.3
C08p28130 Brassica napus HOM05D005449 ORTHO05D006916 1.2e-31 140.2 136 59.6
BraA09t40054Z Brassica rapa HOM05D005449 ORTHO05D006916 1.2e-31 140.2 136 59.6
HanXRQChr10g0316901 Helianthus annuus HOM05D005449 ORTHO05D006916 2.1e-31 139.4 91 80.2
Ciclev10033890m.g Citrus clementina HOM05D005449 ORTHO05D006916 4.7e-31 138.3 147 55.8
Thhalv10010784m.g Eutrema salsugineum HOM05D005449 ORTHO05D006916 1.0e-30 137.1 136 59.6
SMO367G0046 Selaginella moellendorffii HOM05D005449 ORTHO05D006916 1.0e-30 137.1 112 65.2
MD10G1102600 Malus domestica HOM05D005449 ORTHO05D006916 1.8e-30 136.3 85 80.0
HanXRQChr06g0163731 Helianthus annuus HOM05D005449 ORTHO05D006916 2.0e-29 132.9 86 81.4
SEGI_14448 Sequoiadendron giganteum HOM05D005449 ORTHO05D006916 3.3e-29 132.1 138 55.8
Atru.chr11.2437 Acer truncatum HOM05D005449 ORTHO05D006916 1.1e-27 127.1 174 48.3
FvH4_7g29690 Fragaria vesca HOM05D005449 ORTHO05D006916 1.4e-27 126.7 75 81.3
AagrBONN_evm.TU.Sc2ySwM_117.989 Anthoceros agrestis HOM05D005449 ORTHO05D006916 4.5e-26 121.7 125 55.2
Actinidia07783 Actinidia chinensis HOM05D005449 ORTHO05D006916 1.0e-25 120.6 73 83.6
PSO675G2923 Papaver somniferum HOM05D005449 ORTHO05D006916 2.2e-25 119.4 95 70.5
Mapoly0162s0020 Marchantia polymorpha HOM05D005449 ORTHO05D006916 4.4e-21 105.1 137 45.3
Zm00001eb085090 Zea mays HOM05D005449 ORTHO05D006916 5.5e-16 88.2 127 45.7
Hma1.2p1_0276F.1_g111190 Hydrangea macrophylla HOM05D005449 ORTHO05D006916 1.2e-15 87.0 63 68.3
Zm00001eb340530 Zea mays HOM05D005449 ORTHO05D006916 6.1e-15 84.7 91 53.8
Manes.01G220201 Manihot esculenta HOM05D005449 ORTHO05D006916 3.0e-14 82.4 84 56.0
BcaC07g39651 Brassica carinata HOM05D001272 ORTHO05D001843 9.8e-13 77.4 85 52.9
FAN17G0623 Fragaria x ananassa HOM05D005449 ORTHO05D006916 9.2e-11 70.9 42 78.6
Hma1.2p1_0494F.1_g165230 Hydrangea macrophylla HOM05D005449 ORTHO05D006916 7.3e-08 61.2 33 84.8
Aa31LG10G7880 Aethionema arabicum HOM05D005449 ORTHO05D006916 8.0e-07 57.8 74 50.0
C06p20730 Brassica napus HOM05D005449 ORTHO05D027985 4.0e-06 55.5 66 47.0
BolC6t37256H Brassica oleracea HOM05D005449 ORTHO05D027985 4.0e-06 55.5 66 47.0
CBR_g10859 Chara braunii HOM05D005449 ORTHO05D006916 4.0e-06 55.5 103 34.0


User provided reference genes

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