Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0004907 Camellia sinensis var. sinensis HOM05D006891 ORTHO05D008671 5.6e-198 694.1 362 100.0
Dinv13725 Davidia involucrata HOM05D006891 ORTHO05D008671 7.5e-150 534.3 329 84.8
Actinidia18305 Actinidia chinensis HOM05D006891 ORTHO05D008671 1.6e-147 526.6 323 85.4
Nitab4.5_0000976g0010 Nicotiana tabacum HOM05D006891 ORTHO05D008671 6.8e-143 511.1 326 78.8
Lj9C486T5 Lonicera japonica HOM05D006891 ORTHO05D008671 5.7e-142 508.1 326 81.9
vmacro19179 Vaccinium macrocarpon HOM05D006891 ORTHO05D008671 1.3e-141 506.9 327 82.9
Cfa018711 Carpinus fangiana HOM05D006891 ORTHO05D008671 7.0e-140 501.1 326 80.1
Sopen03g037150 Solanum pennellii HOM05D006891 ORTHO05D008671 9.1e-140 500.7 328 78.4
PGSC0003DMG400014243 Solanum tuberosum HOM05D006891 ORTHO05D008671 1.6e-139 500.0 328 78.4
Haze_07102 Corylus avellana HOM05D006891 ORTHO05D008671 2.0e-139 499.6 326 80.1
Solyc03g118240.4 Solanum lycopersicum HOM05D006891 ORTHO05D008671 2.7e-139 499.2 328 78.0
Gorai.001G054400 Gossypium raimondii HOM05D006891 ORTHO05D008671 5.0e-138 495.0 330 77.6
CAN.G843.14 Capsicum annuum HOM05D006891 ORTHO05D008671 1.1e-137 493.8 324 78.1
Gohir.D07G051300 Gossypium hirsutum HOM05D006891 ORTHO05D008671 3.2e-137 492.3 330 77.0
Rhsim08G0196800 Rhododendron simsii HOM05D006891 ORTHO05D008671 3.2e-137 492.3 328 81.4
COL.COLO4_37249 Corchorus olitorius HOM05D006891 ORTHO05D008671 4.2e-137 491.9 328 78.4
Gohir.A07G047000 Gossypium hirsutum HOM05D006891 ORTHO05D008671 5.5e-137 491.5 330 77.0
Peaxi162Scf00314g00625 Petunia axillaris HOM05D006891 ORTHO05D008671 3.6e-136 488.8 326 77.6
Nn3g16285 Nelumbo nucifera HOM05D006891 ORTHO05D008671 8.0e-136 487.6 327 77.4
MSTRG.4642 Avicennia marina HOM05D006891 ORTHO05D008671 1.4e-135 486.9 327 77.7
TAR475G0005 Trochodendron aralioides HOM05D006891 ORTHO05D008671 3.0e-135 485.7 332 76.2
Duzib205G0665 Durio zibethinus HOM05D006891 ORTHO05D008671 6.8e-135 484.6 328 76.8
Lalb_Chr13g0296991 Lupinus albus HOM05D006891 ORTHO05D008671 6.8e-135 484.6 324 79.0
QL10p000565 Quercus lobata HOM05D006891 ORTHO05D008671 8.8e-135 484.2 330 77.3
Prupe.5G142500 Prunus persica HOM05D006891 ORTHO05D008671 2.2e-133 479.6 326 76.1
CiPaw.12G001000 Carya illinoinensis HOM05D006891 ORTHO05D008671 3.7e-133 478.8 329 76.9
Thecc.03G139800 Theobroma cacao HOM05D006891 ORTHO05D008671 8.3e-133 477.6 331 76.4
Ciclev10032123m.g Citrus clementina HOM05D006891 ORTHO05D008671 2.0e-131 473.0 329 76.6
DCAR_025652 Daucus carota HOM05D006891 ORTHO05D008671 2.7e-131 472.6 325 76.3
Glyma.05G200500 Glycine max HOM05D006891 ORTHO05D008671 3.5e-131 472.2 331 77.0
TWI39G1149 Tripterygium wilfordii HOM05D006891 ORTHO05D008671 4.5e-131 471.9 329 76.0
Eucgr.G02043 Eucalyptus grandis HOM05D006891 ORTHO05D008671 5.9e-131 471.5 330 74.2
Cpa.g.sc13.164 Carica papaya HOM05D006891 ORTHO05D008671 1.3e-130 470.3 329 75.4
Glyma.08G007900 Glycine max HOM05D006891 ORTHO05D008671 1.1e-129 467.2 368 69.3
VMungo0251G3529 Vigna mungo HOM05D006891 ORTHO05D008671 1.1e-129 467.2 326 76.1
MD14G1147900 Malus domestica HOM05D006891 ORTHO05D008671 3.6e-128 462.2 323 74.0
PSO017G2699 Papaver somniferum HOM05D006891 ORTHO05D008671 3.6e-128 462.2 331 73.1
Phvul.002G281900 Phaseolus vulgaris HOM05D006891 ORTHO05D008671 4.7e-128 461.8 328 75.0
Migut.D01186 Erythranthe guttata HOM05D006891 ORTHO05D008671 6.1e-128 461.5 326 73.6
Sc04g0000210 Simmondsia chinensis HOM05D006891 ORTHO05D008671 1.0e-127 460.7 331 75.2
PSO478G3300 Papaver somniferum HOM05D006891 ORTHO05D008671 1.4e-127 460.3 331 73.1
Atru.chr6.1910 Acer truncatum HOM05D006891 ORTHO05D008671 1.8e-127 459.9 325 76.3
Aqoxy5G03144 Aquilegia oxysepala HOM05D006891 ORTHO05D008671 5.2e-127 458.4 326 73.3
Lj4g0024376 Lotus japonicus HOM05D006891 ORTHO05D008671 6.8e-127 458.0 327 73.4
FvH4_5g09430 Fragaria vesca HOM05D006891 ORTHO05D008671 8.9e-127 457.6 323 73.4
Lsat_1_v5_gn_4_84561 Lactuca sativa HOM05D006891 ORTHO05D008671 2.0e-126 456.4 328 76.2
arahy.Tifrunner.gnm1.ann1.5G0V08 Arachis hypogaea HOM05D006891 ORTHO05D008671 3.4e-126 455.7 334 73.1
SGA_v2.0_scaffold40G15677 Striga asiatica HOM05D006891 ORTHO05D008671 3.4e-126 455.7 322 73.0
PGR142G3013 Punica granatum HOM05D006891 ORTHO05D008671 2.2e-125 453.0 335 72.8
FAN04G1325 Fragaria x ananassa HOM05D006891 ORTHO05D008671 4.9e-125 451.8 321 72.9
MD06G1131500 Malus domestica HOM05D006891 ORTHO05D008671 4.9e-125 451.8 331 71.6
FAN18G0906 Fragaria x ananassa HOM05D006891 ORTHO05D008671 6.4e-125 451.4 321 71.7
RcHm_v2.0_Chr7g0188761 Rosa chinensis HOM05D006891 ORTHO05D008671 1.4e-124 450.3 321 72.6
FAN08G0367 Fragaria x ananassa HOM05D006891 ORTHO05D008671 2.4e-124 449.5 321 72.6
MBI04_g35563_MAGBIO Magnolia biondii HOM05D006891 ORTHO05D008671 4.1e-124 448.7 331 72.5
Sabra12G0078900 Salix brachista HOM05D006891 ORTHO05D008671 1.2e-123 447.2 344 69.8
Manes.06G126400 Manihot esculenta HOM05D006891 ORTHO05D008671 2.0e-123 446.4 325 72.6
HanXRQChr11g0350211 Helianthus annuus HOM05D006891 ORTHO05D008671 6.6e-122 441.4 325 73.2
HanXRQChr09g0273851 Helianthus annuus HOM05D006891 ORTHO05D008671 1.9e-121 439.9 325 72.9
Aa31LG7G10590 Aethionema arabicum HOM05D006891 ORTHO05D008671 2.5e-121 439.5 322 72.0
CDE11G0769 Ceratophyllum demersum HOM05D006891 ORTHO05D008671 1.2e-120 437.2 321 71.7
ClCG06G018350 Citrullus lanatus HOM05D006891 ORTHO05D008671 4.7e-120 435.3 331 71.3
CsaV3_1G000080 Cucumis sativus L. HOM05D006891 ORTHO05D008671 1.8e-119 433.3 273 79.9
Sed0026594 Sechium edule HOM05D006891 ORTHO05D008671 3.1e-119 432.6 285 77.2
Thhalv10025780m.g Eutrema salsugineum HOM05D006891 ORTHO05D008671 5.2e-119 431.8 299 73.6
Medtr8g100120 Medicago truncatula HOM05D006891 ORTHO05D008671 5.2e-119 431.8 325 71.1
MELO3C026160.2 Cucumis melo HOM05D006891 ORTHO05D008671 8.9e-119 431.0 304 75.3
GSVIVG01008643001 Vitis vinifera HOM05D006891 ORTHO05D008671 2.6e-118 429.5 333 71.2
Sp7g23060 Schrenkiella parvula HOM05D006891 ORTHO05D008671 7.5e-118 427.9 299 73.6
CARHR232470 Cardamine hirsuta HOM05D006891 ORTHO05D008671 6.4e-117 424.9 299 73.2
BcaC09g50812 Brassica carinata HOM05D006891 ORTHO05D008671 5.4e-116 421.8 319 68.7
BcaNung03997 Brassica carinata HOM05D006891 ORTHO05D008671 5.4e-116 421.8 319 69.0
Carub.0007s1596 Capsella rubella HOM05D006891 ORTHO05D008671 1.2e-115 420.6 305 71.8
C01p20480 Brassica napus HOM05D006891 ORTHO05D008671 1.6e-115 420.2 319 68.3
BolC1t01979H Brassica oleracea HOM05D006891 ORTHO05D008671 1.6e-115 420.2 319 68.3
AT4G25080 Arabidopsis thaliana HOM05D006891 ORTHO05D008671 2.0e-115 419.9 305 71.5
A01p16330 Brassica napus HOM05D006891 ORTHO05D008671 2.0e-115 419.9 305 71.1
Psat7g039320 Pisum sativum HOM05D006891 ORTHO05D008671 2.0e-115 419.9 353 65.2
arahy.Tifrunner.gnm1.ann1.0QZ944 Arachis hypogaea HOM05D006891 ORTHO05D008671 2.7e-115 419.5 334 69.2
C07p53960 Brassica napus HOM05D006891 ORTHO05D008671 2.7e-115 419.5 299 72.6
A03p55730 Brassica napus HOM05D006891 ORTHO05D008671 3.5e-115 419.1 319 68.3
BraA01t01588Z Brassica rapa HOM05D006891 ORTHO05D008671 3.5e-115 419.1 319 68.3
BraA03t14640Z Brassica rapa HOM05D006891 ORTHO05D008671 3.5e-115 419.1 299 72.2
AUR62009532 Chenopodium quinoa HOM05D006891 ORTHO05D008671 7.8e-115 417.9 260 80.4
AL7G28070 Arabidopsis lyrata HOM05D006891 ORTHO05D008671 1.3e-114 417.2 305 70.5
SalBow1G6359 Salvia bowleyana HOM05D006891 ORTHO05D008671 7.3e-113 411.4 323 69.3
ECA232G2217 Erigeron canadensis HOM05D006891 ORTHO05D008671 2.3e-111 406.4 324 68.2
BolC7t45886H Brassica oleracea HOM05D006891 ORTHO05D008671 3.1e-111 406.0 299 71.2
Hund02505 Selenicereus undatus HOM05D006891 ORTHO05D008671 3.4e-110 402.5 233 85.8
CANSAT56G0245 Cannabis sativa HOM05D006891 ORTHO05D008671 9.9e-110 401.0 324 67.0
CANSAT56G1732 Cannabis sativa HOM05D006891 ORTHO05D008671 9.9e-110 401.0 324 67.0
unitig_736.g22830 Utricularia gibba HOM05D002810 ORTHO05D003983 2.2e-109 399.8 314 68.5
TPR.G12963 Trifolium pratense HOM05D006891 ORTHO05D008671 6.4e-109 398.3 293 71.0
HPP92_020658 Vanilla planifolia HOM05D006891 ORTHO05D008671 2.4e-108 396.4 288 70.1
AUR62041695 Chenopodium quinoa HOM05D006891 ORTHO05D008671 2.3e-106 389.8 329 64.7
Potri.012G106600 Populus trichocarpa HOM05D006891 ORTHO05D008671 3.0e-106 389.4 234 82.9
THA.LOC104811559 Tarenaya hassleriana HOM05D006891 ORTHO05D008671 1.3e-101 374.0 331 63.1
SEGI_33809 Sequoiadendron giganteum HOM05D006891 ORTHO05D008671 4.1e-100 369.0 280 66.8
ATR0579G076 Amborella trichopoda HOM05D006891 ORTHO05D008671 7.8e-99 364.8 242 73.6
AagrBONN_evm.TU.Sc2ySwM_368.2875 Anthoceros agrestis HOM05D006891 ORTHO05D008671 3.4e-94 349.4 270 64.4
Ah.11g046860 Amaranthus hybridus HOM05D006891 ORTHO05D008671 7.6e-94 348.2 211 82.9
SMO115G0098 Selaginella moellendorffii HOM05D006891 ORTHO05D008671 7.6e-94 348.2 268 65.7
Pp3c12_24890 Physcomitrium patens HOM05D006891 ORTHO05D008671 2.9e-93 346.3 274 66.4
Mapoly0112s0034 Marchantia polymorpha HOM05D006891 ORTHO05D008671 1.1e-87 327.8 266 61.7
EL10Ac5g11293 Beta vulgaris HOM05D006891 ORTHO05D008671 1.2e-86 324.3 343 55.4
Cre12.g498550 Chlamydomonas reinhardtii HOM05D006891 ORTHO05D008671 2.9e-85 319.7 267 59.2
Zm00001eb269720 Zea mays HOM05D006891 ORTHO05D008671 2.7e-83 313.2 285 59.6
Ca_16812_v3 Cicer arietinum L. HOM05D006891 ORTHO05D008671 1.4e-76 290.8 228 70.2
MCO11G158 Micromonas commoda HOM05D006891 ORTHO05D008671 1.3e-74 284.3 272 54.4
Hma1.2p1_0577F.1_g182340 Hydrangea macrophylla HOM05D006891 ORTHO05D008671 6.9e-71 271.9 198 76.3
unitig_899.g14822 Utricularia gibba HOM05D002810 ORTHO05D003983 4.5e-70 269.2 308 53.9
AUR62044303 Chenopodium quinoa HOM05D006891 ORTHO05D008671 7.2e-60 235.3 241 54.8
Potri.015G105702 Populus trichocarpa HOM05D006891 ORTHO05D008671 1.1e-57 228.0 231 55.8
Dinv23219 Davidia involucrata HOM05D006891 ORTHO05D008671 9.1e-55 218.4 170 70.6
Os06g0132400 Oryza sativa ssp. japonica HOM05D006891 ORTHO05D008671 4.5e-38 162.9 103 70.9
SGA_v2.0_scaffold377G50317 Striga asiatica HOM05D006891 ORTHO05D008671 5.9e-22 109.4 68 73.5
CBR_g32078 Chara braunii HOM05D006891 ORTHO05D008671 3.4e-17 93.6 70 61.4
BraA03t14643Z Brassica rapa HOM05D006891 ORTHO05D033303 2.2e-08 64.3 64 60.9
Eucgr.G02044 Eucalyptus grandis HOM05D006891 ORTHO05D008671 2.9e-08 63.9 128 40.6
Lsat_1_v5_gn_6_13761 Lactuca sativa HOM05D000295 ORTHO05D000188 4.6e-06 56.6 95 40.0


User provided reference genes

Program Settings