Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0004888 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 3.6e-149 531.6 269 100.0
CSS0041884 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 3.3e-126 455.3 269 88.5
CSS0001709 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 8.9e-124 447.2 290 82.1
CSS0015899 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 8.9e-124 447.2 279 85.3
CSS0002085 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 5.2e-116 421.4 275 81.8
CSS0039150 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 1.0e-95 354.0 267 73.4
CSS0029313 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 1.2e-88 330.5 270 69.6
vmacro03558 Vaccinium macrocarpon HOM05D003515 ORTHO05D004347 1.3e-66 257.3 290 54.8
RhsimUnG0176900 Rhododendron simsii HOM05D003515 ORTHO05D004347 4.8e-61 238.8 316 50.3
Dinv07004 Davidia involucrata HOM05D003515 ORTHO05D004347 1.1e-57 227.6 287 48.8
Rhsim13G0134000 Rhododendron simsii HOM05D003515 ORTHO05D004347 5.2e-55 218.8 359 44.8
CSS0031993 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 9.4e-49 198.0 279 45.2
Lj1C1149T14 Lonicera japonica HOM05D003515 ORTHO05D004347 9.4e-41 171.4 278 42.4
QL11p012061 Quercus lobata HOM05D003515 ORTHO05D004347 1.2e-40 171.0 289 40.8
Cfa001125 Carpinus fangiana HOM05D003515 ORTHO05D004347 2.4e-36 156.8 298 38.9
Haze_05267 Corylus avellana HOM05D003515 ORTHO05D004347 1.0e-34 151.4 322 36.0
Atru.chr10.315 Acer truncatum HOM05D003515 ORTHO05D004347 2.3e-34 150.2 288 36.8
CiPaw.10G105500 Carya illinoinensis HOM05D003515 ORTHO05D004347 3.8e-34 149.4 291 40.9
Cc09_g05170 Coffea canephora HOM05D003515 ORTHO05D004347 4.7e-32 142.5 284 38.0
TWI63G0015 Tripterygium wilfordii HOM05D003515 ORTHO05D004347 5.2e-31 139.0 300 36.7
TAR624G0550 Trochodendron aralioides HOM05D003515 ORTHO05D004347 5.7e-30 135.6 219 41.1
RcHm_v2.0_Chr5g0021121 Rosa chinensis HOM05D003515 ORTHO05D004347 1.3e-29 134.4 287 35.9
FvH4_3g13010 Fragaria vesca HOM05D003515 ORTHO05D004347 8.3e-29 131.7 291 34.7
FAN11G3814 Fragaria x ananassa HOM05D003515 ORTHO05D004347 1.1e-28 131.3 289 34.6
CSS0035626 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 1.8e-28 130.6 87 77.0
RcHm_v2.0_Chr5g0021201 Rosa chinensis HOM05D003515 ORTHO05D004347 1.8e-28 130.6 286 35.7
CSS0032761 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 7.0e-28 128.6 94 72.3
CSS0002123 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 9.2e-28 128.3 94 71.3
Duzib132G1190 Durio zibethinus HOM05D003515 ORTHO05D004347 6.6e-26 122.1 291 34.7
GSVIVG01012151001 Vitis vinifera HOM05D003515 ORTHO05D004347 6.6e-26 122.1 328 31.7
Thecc.02G003700 Theobroma cacao HOM05D003515 ORTHO05D004347 2.5e-25 120.2 262 38.2
Prupe.4G118000 Prunus persica HOM05D003515 ORTHO05D004347 1.2e-24 117.9 290 34.5
CANSAT35G1862 Cannabis sativa HOM05D003515 ORTHO05D004347 2.8e-24 116.7 280 32.1
Hma1.2p1_0088F.1_g045250 Hydrangea macrophylla HOM05D003515 ORTHO05D004347 2.8e-24 116.7 121 54.5
Manes.03G074900 Manihot esculenta HOM05D003515 ORTHO05D004347 1.2e-22 111.3 284 34.2
Oeu008987.4 Olea europaea HOM05D003515 ORTHO05D004347 3.4e-22 109.8 200 39.0
Nn7g38343 Nelumbo nucifera HOM05D003515 ORTHO05D004347 9.8e-22 108.2 213 38.5
Ca_18232_v3 Cicer arietinum L. HOM05D003515 ORTHO05D004347 4.9e-21 105.9 289 31.8
DCAR_007777 Daucus carota HOM05D003515 ORTHO05D004347 8.3e-21 105.1 202 40.1
FAN16G1075 Fragaria x ananassa HOM05D003515 ORTHO05D004347 1.4e-20 104.4 229 34.5
Gorai.009G257800 Gossypium raimondii HOM05D003515 ORTHO05D004347 7.0e-20 102.1 292 31.8
RcHm_v2.0_Chr5g0021171 Rosa chinensis HOM05D003515 ORTHO05D004347 9.2e-20 101.7 197 38.1
FAN21G1878 Fragaria x ananassa HOM05D003515 ORTHO05D004347 5.9e-19 99.0 220 33.6
Glyma.08G088900 Glycine max HOM05D003515 ORTHO05D004347 1.3e-18 97.8 288 29.5
Lalb_Chr13g0293411 Lupinus albus HOM05D003515 ORTHO05D004347 1.7e-18 97.4 290 29.3
HanXRQChr14g0439721 Helianthus annuus HOM05D003515 ORTHO05D004347 1.9e-17 94.0 269 29.7
Gohir.D05G247100 Gossypium hirsutum HOM05D003515 ORTHO05D004347 4.3e-17 92.8 287 30.7
Potri.003G152600 Populus trichocarpa HOM05D003515 ORTHO05D004347 7.3e-17 92.0 277 31.4
Lj4g0010619 Lotus japonicus HOM05D003515 ORTHO05D004347 2.1e-16 90.5 280 31.1
Phvul.002G188000 Phaseolus vulgaris HOM05D003515 ORTHO05D004347 4.7e-16 89.4 281 28.1
Medtr4g094755 Medicago truncatula HOM05D003515 ORTHO05D004347 8.0e-16 88.6 252 29.4
SGA_v2.0_scaffold298G47708 Striga asiatica HOM05D003515 ORTHO05D004347 8.0e-16 88.6 288 31.6
arahy.Tifrunner.gnm1.ann1.NQ3I2Y Arachis hypogaea HOM05D003515 ORTHO05D004347 1.8e-15 87.4 291 28.9
arahy.Tifrunner.gnm1.ann1.ZWBN17 Arachis hypogaea HOM05D003515 ORTHO05D004347 1.8e-15 87.4 291 29.2
COL.COLO4_16231 Corchorus olitorius HOM05D003515 ORTHO05D004347 2.3e-15 87.0 286 32.2
Ciclev10014398m.g Citrus clementina HOM05D003515 ORTHO05D004347 3.1e-15 86.7 311 28.0
MD10G1227100 Malus domestica HOM05D003515 ORTHO05D004347 1.5e-14 84.3 180 36.1
Sc05g0004760 Simmondsia chinensis HOM05D003515 ORTHO05D004347 2.6e-14 83.6 235 34.5
Eucgr.D00012 Eucalyptus grandis HOM05D003515 ORTHO05D004347 7.5e-14 82.0 278 29.9
VMungo0251G3194 Vigna mungo HOM05D003515 ORTHO05D004347 7.5e-14 82.0 288 28.8
MSTRG.2875 Avicennia marina HOM05D003515 ORTHO05D004347 1.3e-13 81.3 206 35.4
Migut.M02011 Erythranthe guttata HOM05D003515 ORTHO05D004347 2.2e-13 80.5 121 44.6
TPR.G28148 Trifolium pratense HOM05D003515 ORTHO05D004347 4.9e-13 79.3 123 40.7
Aqoxy2G04030 Aquilegia oxysepala HOM05D003515 ORTHO05D004347 6.4e-13 79.0 200 31.0
Psat7g087560 Pisum sativum HOM05D003515 ORTHO05D004347 9.2e-12 75.1 283 26.9
ECA238G0584 Erigeron canadensis HOM05D003515 ORTHO05D004347 1.6e-11 74.3 265 27.9
MELO3C007012.2 Cucumis melo HOM05D003515 ORTHO05D004347 2.7e-11 73.6 302 28.1
Cpa.g.sc30.106 Carica papaya HOM05D003515 ORTHO05D004347 3.5e-11 73.2 115 39.1
Peaxi162Scf00151g00110 Petunia axillaris HOM05D003515 ORTHO05D004347 7.8e-11 72.0 277 29.6
CAN.G391.1 Capsicum annuum HOM05D003515 ORTHO05D004347 1.3e-10 71.2 291 29.2
PGSC0003DMG402001013 Solanum tuberosum HOM05D003515 ORTHO05D004347 1.7e-10 70.9 241 31.1
ClCG01G025730 Citrullus lanatus HOM05D003515 ORTHO05D004347 2.3e-10 70.5 293 28.3
Solyc01g034150.4 Solanum lycopersicum HOM05D003515 ORTHO05D004347 8.6e-10 68.6 236 30.1
PSO541G6439 Papaver somniferum HOM05D003515 ORTHO05D004347 1.1e-09 68.2 280 28.6
Sabra03G0110800 Salix brachista HOM05D003515 ORTHO05D004347 1.1e-09 68.2 283 27.6
Lsat_1_v5_gn_2_60141 Lactuca sativa HOM05D003515 ORTHO05D004347 2.5e-09 67.0 167 34.1
AUR62037879 Chenopodium quinoa HOM05D003515 ORTHO05D004347 4.3e-09 66.2 78 43.6
PGR004G1774 Punica granatum HOM05D003515 ORTHO05D004347 7.3e-09 65.5 182 31.3
THA.LOC104812921 Tarenaya hassleriana HOM05D003515 ORTHO05D004347 7.3e-09 65.5 276 26.4
Carub.0008s0352 Capsella rubella HOM05D003515 ORTHO05D004347 2.1e-08 63.9 277 26.0
AUR62040333 Chenopodium quinoa HOM05D003515 ORTHO05D004347 2.8e-08 63.5 59 47.5
Ah.15g091880 Amaranthus hybridus HOM05D003515 ORTHO05D004347 4.7e-08 62.8 115 32.2
SHI28056 Sapria himalayana HOM05D003515 ORTHO05D004347 6.2e-08 62.4 55 50.9
Phvul.007G101032 Phaseolus vulgaris HOM05D003515 ORTHO05D004347 8.1e-08 62.0 171 29.8
Sed0024374 Sechium edule HOM05D003515 ORTHO05D004347 1.4e-07 61.2 219 31.1
ATR0763G272 Amborella trichopoda HOM05D003515 ORTHO05D004347 5.2e-07 59.3 52 59.6
Zm00001eb152650 Zea mays HOM05D003515 ORTHO05D004347 6.8e-07 58.9 55 45.5
Os01g0757800 Oryza sativa ssp. japonica HOM05D003515 ORTHO05D004347 1.2e-06 58.2 123 27.6
EL10Ac7g17242 Beta vulgaris HOM05D003515 ORTHO05D004347 1.5e-06 57.8 135 34.1
CDE06G0149 Ceratophyllum demersum HOM05D003515 ORTHO05D004347 3.4e-06 56.6 56 50.0
BraA06t27567Z Brassica rapa HOM05D003515 ORTHO05D004347 9.9e-06 55.1 124 33.9
HPP92_014201 Vanilla planifolia HOM05D003515 ORTHO05D004347 9.9e-06 55.1 139 30.2


User provided reference genes

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