Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0004858 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 1.9e-113 412.5 211 100.0
CSS0025371 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 3.3e-113 411.8 211 99.5
CSS0037763 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 3.3e-113 411.8 211 99.5
CSS0040065 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 3.3e-113 411.8 211 99.5
CSS0020797 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 2.8e-112 408.7 211 99.1
CSS0001168 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 3.0e-111 405.2 211 98.1
CSS0032680 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 1.1e-105 386.7 202 98.0
CSS0042852 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 3.3e-105 385.2 211 94.8
CSS0010108 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 7.3e-105 384.0 211 94.3
CSS0035203 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 1.6e-88 329.7 195 89.7
Actinidia22242 Actinidia chinensis HOM05D008080 ORTHO05D010244 1.9e-52 209.9 188 65.4
Lj2A146T28 Lonicera japonica HOM05D008080 ORTHO05D010244 4.1e-39 165.6 150 62.0
Rhsim02G0256000 Rhododendron simsii HOM05D008080 ORTHO05D010244 2.6e-38 162.9 224 49.6
QL02p026515 Quercus lobata HOM05D008080 ORTHO05D010244 1.1e-36 157.5 131 64.1
Thecc.03G213000 Theobroma cacao HOM05D008080 ORTHO05D010244 1.4e-36 157.1 105 78.1
DCAR_028394 Daucus carota HOM05D008080 ORTHO05D010244 1.0e-34 151.0 111 70.3
Gohir.A03G078700 Gossypium hirsutum HOM05D008080 ORTHO05D010244 1.4e-34 150.6 129 62.0
Gohir.D03G089300 Gossypium hirsutum HOM05D008080 ORTHO05D010244 5.1e-34 148.7 129 62.0
Lsat_1_v5_gn_3_13260 Lactuca sativa HOM05D008080 ORTHO05D010244 5.1e-34 148.7 116 63.8
Potri.011G147000 Populus trichocarpa HOM05D008080 ORTHO05D010244 5.1e-34 148.7 148 58.8
GSVIVG01019727001 Vitis vinifera HOM05D008080 ORTHO05D006305 6.7e-34 148.3 158 56.3
Potri.001G454900 Populus trichocarpa HOM05D008080 ORTHO05D010244 8.8e-34 147.9 135 60.0
MBI04_g15074_MAGBIO Magnolia biondii HOM05D008080 ORTHO05D010244 1.1e-33 147.5 107 68.2
Duzib205G0863 Durio zibethinus HOM05D008080 ORTHO05D010244 1.5e-33 147.1 105 73.3
CANSAT21G2269 Cannabis sativa HOM05D008080 ORTHO05D010244 3.3e-33 146.0 140 56.4
CiPaw.11G105600 Carya illinoinensis HOM05D008080 ORTHO05D010244 5.7e-33 145.2 117 64.1
Aqoxy5G03619 Aquilegia oxysepala HOM05D008080 ORTHO05D010244 2.8e-32 142.9 117 63.2
MD06G1128100 Malus domestica HOM05D008080 ORTHO05D010244 2.8e-32 142.9 113 64.6
Prupe.5G137900 Prunus persica HOM05D008080 ORTHO05D010244 6.3e-32 141.7 113 65.5
HanXRQChr17g0534021 Helianthus annuus HOM05D008080 ORTHO05D010244 6.9e-31 138.3 116 62.9
PGR031G3362 Punica granatum HOM05D008080 ORTHO05D010244 9.1e-31 137.9 162 53.1
FvH4_5g10080 Fragaria vesca HOM05D008080 ORTHO05D010244 1.5e-30 137.1 125 60.8
FAN18G1060 Fragaria x ananassa HOM05D008080 ORTHO05D010244 1.5e-30 137.1 125 60.8
RcHm_v2.0_Chr7g0188191 Rosa chinensis HOM05D008080 ORTHO05D010244 2.0e-30 136.7 165 51.5
FAN08G1106 Fragaria x ananassa HOM05D008080 ORTHO05D010244 5.9e-30 135.2 125 60.0
CDE09G0306 Ceratophyllum demersum HOM05D008080 ORTHO05D010244 1.7e-29 133.7 117 59.0
ECA246G2048 Erigeron canadensis HOM05D008080 ORTHO05D010244 6.5e-29 131.7 114 59.6
CDE11G0346 Ceratophyllum demersum HOM05D008080 ORTHO05D010244 8.5e-29 131.3 117 57.3
TWI81G0982 Tripterygium wilfordii HOM05D008080 ORTHO05D010244 2.1e-27 126.7 108 65.7
Os04g0577800 Oryza sativa ssp. japonica HOM05D008080 ORTHO05D010244 1.0e-26 124.4 115 57.4
Carub.0001s3146 Capsella rubella HOM05D008080 ORTHO05D010244 1.4e-26 124.0 117 55.6
A09p32970 Brassica napus HOM05D008080 ORTHO05D010244 3.9e-26 122.5 104 61.5
Aa31LG6G7790 Aethionema arabicum HOM05D008080 ORTHO05D010244 6.7e-26 121.7 121 56.2
Thhalv10008894m.g Eutrema salsugineum HOM05D008080 ORTHO05D010244 6.7e-26 121.7 104 60.6
Zm00001eb073300 Zea mays HOM05D008080 ORTHO05D010244 6.7e-26 121.7 115 56.5
AL1G47660 Arabidopsis lyrata HOM05D008080 ORTHO05D010244 1.1e-25 120.9 117 56.4
BcaC08g43879 Brassica carinata HOM05D008080 ORTHO05D010244 1.1e-25 120.9 104 60.6
BolC6t36418H Brassica oleracea HOM05D008080 ORTHO05D010244 1.1e-25 120.9 104 60.6
BraA09t38837Z Brassica rapa HOM05D008080 ORTHO05D010244 1.1e-25 120.9 104 60.6
Nn5g27399 Nelumbo nucifera HOM05D008080 ORTHO05D010244 1.1e-25 120.9 99 63.6
Sp1g28720 Schrenkiella parvula HOM05D008080 ORTHO05D010244 1.5e-25 120.6 117 57.3
AT1G33265 Arabidopsis thaliana HOM05D008080 ORTHO05D010244 2.6e-25 119.8 117 56.4
C06p12680 Brassica napus HOM05D008080 ORTHO05D010244 3.3e-25 119.4 104 59.6
CARHR032630 Cardamine hirsuta HOM05D008080 ORTHO05D010244 3.3e-25 119.4 103 61.2
FAN04G0887 Fragaria x ananassa HOM05D008080 ORTHO05D010244 3.3e-25 119.4 131 54.2
THA.LOC104806472 Tarenaya hassleriana HOM05D008080 ORTHO05D010244 7.4e-25 118.2 113 56.6
Gorai.003G072100 Gossypium raimondii HOM05D008080 ORTHO05D010244 1.3e-24 117.5 95 61.1
BcaB07g32963 Brassica carinata HOM05D008080 ORTHO05D010244 2.8e-24 116.3 104 58.7
Thhalv10008954m.g Eutrema salsugineum HOM05D008080 ORTHO05D010244 3.7e-24 115.9 117 55.6
SMO114G0056 Selaginella moellendorffii HOM05D008080 ORTHO05D010244 4.8e-24 115.5 106 59.4
HPP92_014501 Vanilla planifolia HOM05D008080 ORTHO05D010244 4.1e-23 112.5 105 55.2
Pp3c4_29930 Physcomitrium patens HOM05D008080 ORTHO05D010244 7.0e-23 111.7 142 43.7
Pp3c4_29940 Physcomitrium patens HOM05D008080 ORTHO05D010244 7.0e-23 111.7 142 43.7
COL.COLO4_20927 Corchorus olitorius HOM05D008080 ORTHO05D010244 7.7e-22 108.2 80 68.8
Sabra16G0307700 Salix brachista HOM05D008080 ORTHO05D010244 6.5e-21 105.1 236 34.3
ATR0620G064 Amborella trichopoda HOM05D008080 ORTHO05D010244 3.6e-19 99.4 82 63.4
MBI04_g47856_MAGBIO Magnolia biondii HOM05D008080 ORTHO05D010244 1.7e-16 90.5 55 76.4
Dinv03669 Davidia involucrata HOM05D008080 ORTHO05D010244 2.2e-16 90.1 63 71.4
CBR_g15957 Chara braunii HOM05D000019 ORTHO05D000002 2.8e-16 89.7 99 48.5
Cpa.g.sc37.123 Carica papaya HOM05D008080 ORTHO05D010244 8.0e-11 71.6 67 62.7
Eucgr.D02545 Eucalyptus grandis HOM05D008080 ORTHO05D010244 2.6e-09 66.6 78 53.8
Sabra11G0132200 Salix brachista HOM05D008080 ORTHO05D010244 5.4e-07 58.9 100 42.0


User provided reference genes

Program Settings