Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0004826 Camellia sinensis var. sinensis HOM05D057373 ORTHO05D012494 2.0e-127 459.1 236 100.0
CSS0044320 Camellia sinensis var. sinensis HOM05D057373 ORTHO05D012494 1.1e-85 320.5 240 71.7
CSS0030058 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 3.7e-33 146.0 209 46.4
CSS0047537 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 1.2e-31 141.0 205 46.3
QL03p030360 Quercus lobata HOM05D000045 ORTHO05D000067 9.5e-29 131.3 213 46.9
CSS0046795 Camellia sinensis var. sinensis HOM05D011242 ORTHO05D012494 5.6e-13 79.0 188 33.0
CSS0004605 Camellia sinensis var. sinensis HOM05D011242 ORTHO05D012494 7.3e-13 78.6 188 34.0
QL05p086352 Quercus lobata HOM05D000045 ORTHO05D000067 2.8e-12 76.6 87 52.9
CSS0005556 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 8.1e-12 75.1 158 35.4
CSS0023584 Camellia sinensis var. sinensis HOM05D011242 ORTHO05D012494 1.1e-11 74.7 188 32.4
CSS0033649 Camellia sinensis var. sinensis HOM05D011242 ORTHO05D012494 1.1e-11 74.7 188 32.4
CSS0041790 Camellia sinensis var. sinensis HOM05D011242 ORTHO05D012494 1.8e-11 73.9 204 35.3
CSS0014156 Camellia sinensis var. sinensis HOM05D011242 ORTHO05D012494 6.8e-11 72.0 156 35.3
CSS0010984 Camellia sinensis var. sinensis HOM05D011242 ORTHO05D012494 1.5e-10 70.9 97 45.4
vmacro19402 Vaccinium macrocarpon HOM05D011242 ORTHO05D012494 1.7e-09 67.4 123 36.6
vmacro12589 Vaccinium macrocarpon HOM05D006631 ORTHO05D008359 2.9e-09 66.6 95 40.0
CSS0039680 Camellia sinensis var. sinensis HOM05D011242 ORTHO05D012494 3.7e-09 66.2 94 43.6
CSS0038307 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 7.1e-08 62.0 90 42.2
vmacro17252 Vaccinium macrocarpon HOM05D000045 ORTHO05D009940 1.6e-07 60.8 96 40.6
vmacro03885 Vaccinium macrocarpon HOM05D011242 ORTHO05D012494 2.7e-07 60.1 141 34.0
Atru.chr12.1768 Acer truncatum HOM05D000045 ORTHO05D009940 3.5e-07 59.7 94 37.2
Hma1.2p1_3064F.1_g332250 Hydrangea macrophylla HOM05D000045 ORTHO05D009940 3.5e-07 59.7 98 36.7
FvH4_6g23211 Fragaria vesca HOM05D000045 ORTHO05D009940 1.0e-06 58.2 96 35.4
vmacro09617 Vaccinium macrocarpon HOM05D011242 ORTHO05D012494 1.3e-06 57.8 94 38.3
TAR371G0903 Trochodendron aralioides HOM05D000045 ORTHO05D000067 3.0e-06 56.6 95 36.8
CSS0025555 Camellia sinensis var. sinensis HOM05D011242 ORTHO05D012494 3.9e-06 56.2 201 34.3
Hma1.2p1_0002F.1_g002660 Hydrangea macrophylla HOM05D000045 ORTHO05D012494 6.6e-06 55.5 96 34.4


User provided reference genes

Program Settings