Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0001558 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 1.5e-68 262.7 130 100.0
CSS0004821 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 1.5e-68 262.7 130 100.0
CSS0026763 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 2.3e-61 238.8 145 84.8
CSS0001057 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 3.0e-61 238.4 145 85.5
CANSAT78G1968 Cannabis sativa HOM05D006266 ORTHO05D008016 1.8e-29 132.9 117 61.5
Actinidia27081 Actinidia chinensis HOM05D006266 ORTHO05D008016 4.0e-29 131.7 117 62.4
Atru.chr4.1256 Acer truncatum HOM05D006266 ORTHO05D008016 5.2e-29 131.3 112 62.5
GSVIVG01010835001 Vitis vinifera HOM05D006266 ORTHO05D008016 5.2e-29 131.3 112 63.4
Gohir.A10G139200 Gossypium hirsutum HOM05D006266 ORTHO05D008016 6.8e-29 131.0 112 61.6
TAR362G0699 Trochodendron aralioides HOM05D006266 ORTHO05D008016 8.9e-29 130.6 112 62.5
Thecc.04G175700 Theobroma cacao HOM05D006266 ORTHO05D008016 1.5e-28 129.8 112 60.7
Ciclev10019615m.g Citrus clementina HOM05D006266 ORTHO05D008016 2.0e-28 129.4 112 61.6
Duzib151G0889 Durio zibethinus HOM05D006266 ORTHO05D008016 2.6e-28 129.0 112 60.7
Lj3g0007796 Lotus japonicus HOM05D006266 ORTHO05D008016 2.6e-28 129.0 112 62.5
Lalb_Chr14g0372511 Lupinus albus HOM05D006266 ORTHO05D008016 2.6e-28 129.0 112 62.5
Prupe.1G197500 Prunus persica HOM05D006266 ORTHO05D008016 2.6e-28 129.0 112 60.7
Cpa.g.sc9.312 Carica papaya HOM05D006266 ORTHO05D008016 3.4e-28 128.6 112 61.6
Ca_01251_v3 Cicer arietinum L. HOM05D006266 ORTHO05D008016 3.4e-28 128.6 112 62.5
Lj3C32G4 Lonicera japonica HOM05D006266 ORTHO05D008016 3.4e-28 128.6 124 58.1
AL4G42140 Arabidopsis lyrata HOM05D006266 ORTHO05D008016 4.4e-28 128.3 112 62.5
AT2G43400 Arabidopsis thaliana HOM05D006266 ORTHO05D008016 4.4e-28 128.3 112 62.5
Sabra17G0016500 Salix brachista HOM05D006266 ORTHO05D008016 4.4e-28 128.3 112 61.6
Dinv44175 Davidia involucrata HOM05D006266 ORTHO05D008016 5.8e-28 127.9 112 61.6
Phvul.005G153800 Phaseolus vulgaris HOM05D006266 ORTHO05D008016 5.8e-28 127.9 112 61.6
Carub.0004s2587 Capsella rubella HOM05D006266 ORTHO05D008016 7.5e-28 127.5 112 61.6
Dinv44151 Davidia involucrata HOM05D006266 ORTHO05D008016 9.9e-28 127.1 112 60.7
Hma1.2p1_0324F.1_g125550 Hydrangea macrophylla HOM05D006266 ORTHO05D008016 9.9e-28 127.1 112 60.7
Hma1.2p1_0324F.1_g125560 Hydrangea macrophylla HOM05D006266 ORTHO05D008016 9.9e-28 127.1 112 60.7
Lj3C1G0 Lonicera japonica HOM05D006266 ORTHO05D008016 9.9e-28 127.1 124 57.3
MBI07_g02893_MAGBIO Magnolia biondii HOM05D006266 ORTHO05D008016 9.9e-28 127.1 112 62.5
TPR.G18865 Trifolium pratense HOM05D006266 ORTHO05D008016 9.9e-28 127.1 112 61.6
QL10p050722 Quercus lobata HOM05D006266 ORTHO05D008016 1.3e-27 126.7 112 60.7
Medtr2g099040 Medicago truncatula HOM05D006266 ORTHO05D008016 1.7e-27 126.3 112 59.8
PSO675G5931 Papaver somniferum HOM05D006266 ORTHO05D008016 1.7e-27 126.3 112 62.5
Potri.017G027500 Populus trichocarpa HOM05D006266 ORTHO05D008016 1.7e-27 126.3 112 61.6
CsaV3_3G015950 Cucumis sativus L. HOM05D006266 ORTHO05D008016 2.2e-27 125.9 112 60.7
Sc19g0002870 Simmondsia chinensis HOM05D006266 ORTHO05D008016 2.2e-27 125.9 112 61.6
Aqoxy2G04160 Aquilegia oxysepala HOM05D006266 ORTHO05D008016 2.9e-27 125.6 112 61.6
Cfa015189 Carpinus fangiana HOM05D006266 ORTHO05D008016 2.9e-27 125.6 112 59.8
CiPaw.02G052400 Carya illinoinensis HOM05D006266 ORTHO05D008016 2.9e-27 125.6 112 59.8
MD04G1042900 Malus domestica HOM05D006266 ORTHO05D008016 2.9e-27 125.6 112 59.8
Manes.11G123500 Manihot esculenta HOM05D006266 ORTHO05D008016 2.9e-27 125.6 112 60.7
Nn7g37595 Nelumbo nucifera HOM05D006266 ORTHO05D008016 2.9e-27 125.6 112 58.9
BcaC02g12401 Brassica carinata HOM05D006266 ORTHO05D008016 3.7e-27 125.2 112 61.6
CARHR138470 Cardamine hirsuta HOM05D006266 ORTHO05D008016 3.7e-27 125.2 112 61.6
Sed0000993 Sechium edule HOM05D006266 ORTHO05D008016 3.7e-27 125.2 112 60.7
C04p04440 Brassica napus HOM05D006266 ORTHO05D008016 4.9e-27 124.8 112 61.6
BolC4t22077H Brassica oleracea HOM05D006266 ORTHO05D008016 4.9e-27 124.8 112 61.6
BraA05t19361Z Brassica rapa HOM05D006266 ORTHO05D008016 4.9e-27 124.8 112 61.6
Gorai.011G140700 Gossypium raimondii HOM05D006266 ORTHO05D008016 4.9e-27 124.8 112 58.9
PSO017G5469 Papaver somniferum HOM05D006266 ORTHO05D008016 4.9e-27 124.8 112 60.7
Sp4g25480 Schrenkiella parvula HOM05D006266 ORTHO05D008016 4.9e-27 124.8 112 61.6
THA.LOC104805138 Tarenaya hassleriana HOM05D006266 ORTHO05D008016 4.9e-27 124.8 117 58.1
Haze_01464 Corylus avellana HOM05D006266 ORTHO05D008016 6.4e-27 124.4 112 58.9
HPP92_022167 Vanilla planifolia HOM05D006266 ORTHO05D008016 6.4e-27 124.4 112 59.8
Eucgr.H00345 Eucalyptus grandis HOM05D006266 ORTHO05D008016 8.3e-27 124.0 112 59.8
Thhalv10001353m.g Eutrema salsugineum HOM05D006266 ORTHO05D008016 8.3e-27 124.0 112 60.7
Glyma.15G029200 Glycine max HOM05D006266 ORTHO05D008016 8.3e-27 124.0 112 59.8
Peaxi162Scf00184g00418 Petunia axillaris HOM05D006266 ORTHO05D008016 8.3e-27 124.0 112 58.9
Psat5g289640 Pisum sativum HOM05D006266 ORTHO05D008016 8.3e-27 124.0 112 59.8
vmacro00635 Vaccinium macrocarpon HOM05D006266 ORTHO05D008016 1.1e-26 123.6 138 52.2
VMungo1080G0961 Vigna mungo HOM05D006266 ORTHO05D008016 1.1e-26 123.6 125 55.2
A05p03740 Brassica napus HOM05D006266 ORTHO05D008016 1.4e-26 123.2 110 61.8
Oeu024477.1 Olea europaea HOM05D006266 ORTHO05D008016 1.4e-26 123.2 115 57.4
Aa31LG1G25150 Aethionema arabicum HOM05D006266 ORTHO05D008016 1.9e-26 122.9 112 59.8
Gohir.D10G127600 Gossypium hirsutum HOM05D006266 ORTHO05D008016 1.9e-26 122.9 112 58.0
RcHm_v2.0_Chr4g0406421 Rosa chinensis HOM05D006266 ORTHO05D008016 2.4e-26 122.5 112 58.0
Hund12414 Selenicereus undatus HOM05D006266 ORTHO05D008016 2.4e-26 122.5 112 57.1
SGA_v2.0_scaffold17G08154 Striga asiatica HOM05D006266 ORTHO05D008016 2.4e-26 122.5 112 58.9
Migut.G01347 Erythranthe guttata HOM05D006266 ORTHO05D008016 3.2e-26 122.1 112 58.0
FvH4_4g10960 Fragaria vesca HOM05D006266 ORTHO05D008016 4.1e-26 121.7 112 57.1
FAN17G0658 Fragaria x ananassa HOM05D006266 ORTHO05D008016 4.1e-26 121.7 112 57.1
CAN.G51.9 Capsicum annuum HOM05D006266 ORTHO05D008016 5.4e-26 121.3 124 55.6
Nitab4.5_0001990g0030 Nicotiana tabacum HOM05D006266 ORTHO05D008016 9.2e-26 120.6 112 58.0
Ah.07g202330 Amaranthus hybridus HOM05D006266 ORTHO05D008016 2.1e-25 119.4 108 59.3
HanXRQChr01g0023481 Helianthus annuus HOM05D006266 ORTHO05D008016 2.1e-25 119.4 112 57.1
ClCG05G007190 Citrullus lanatus HOM05D006266 ORTHO05D008016 2.7e-25 119.0 143 51.0
PGR142G3304 Punica granatum HOM05D006266 ORTHO05D008016 2.7e-25 119.0 112 58.9
DCAR_028531 Daucus carota HOM05D006266 ORTHO05D008016 3.5e-25 118.6 112 57.1
Nitab4.5_0000505g0020 Nicotiana tabacum HOM05D006266 ORTHO05D008016 3.5e-25 118.6 112 57.1
Cc03_g11970 Coffea canephora HOM05D006266 ORTHO05D008016 6.0e-25 117.9 112 58.0
MELO3C006793.2 Cucumis melo HOM05D006266 ORTHO05D008016 6.0e-25 117.9 113 55.8
ATR0743G015 Amborella trichopoda HOM05D006266 ORTHO05D008016 7.8e-25 117.5 112 56.2
Lsat_1_v5_gn_1_77821 Lactuca sativa HOM05D006266 ORTHO05D008016 1.0e-24 117.1 112 55.4
CDE09G1029 Ceratophyllum demersum HOM05D006266 ORTHO05D008016 1.3e-24 116.7 110 57.3
Zm00001eb043590 Zea mays HOM05D006266 ORTHO05D008016 1.3e-24 116.7 112 56.2
MSTRG.4284 Avicennia marina HOM05D006266 ORTHO05D008016 1.7e-24 116.3 112 55.4
Solyc12g021170.2 Solanum lycopersicum HOM05D006266 ORTHO05D008016 1.7e-24 116.3 124 53.2
Sopen12g011050 Solanum pennellii HOM05D006266 ORTHO05D008016 1.7e-24 116.3 124 53.2
ECA248G0977 Erigeron canadensis HOM05D006266 ORTHO05D008016 3.0e-24 115.5 112 56.2
arahy.Tifrunner.gnm1.ann1.D6UD48 Arachis hypogaea HOM05D006266 ORTHO05D008016 8.6e-24 114.0 112 55.4
arahy.Tifrunner.gnm1.ann1.JU07H9 Arachis hypogaea HOM05D006266 ORTHO05D008016 7.3e-23 110.9 112 54.5
AagrBONN_evm.TU.Sc2ySwM_117.3933 Anthoceros agrestis HOM05D006266 ORTHO05D008016 1.1e-21 107.1 110 50.9
SMO141G0282 Selaginella moellendorffii HOM05D006266 ORTHO05D008016 1.2e-20 103.6 110 49.1
Rhsim09G0023000 Rhododendron simsii HOM05D006266 ORTHO05D008016 7.6e-20 100.9 199 36.7
Mapoly0012s0124 Marchantia polymorpha HOM05D006266 ORTHO05D008016 1.3e-19 100.1 110 47.3
Pp3c26_13090 Physcomitrium patens HOM05D006266 ORTHO05D008016 1.1e-18 97.1 110 47.3
PRCOL_00003135 Prasinoderma coloniale HOM05D006266 ORTHO05D008016 5.4e-18 94.7 117 43.6
Cre02.g094300 Chlamydomonas reinhardtii HOM05D006266 ORTHO05D008016 3.5e-17 92.0 112 44.6
Cfa026422 Carpinus fangiana HOM05D006266 ORTHO05D008016 1.7e-16 89.7 112 47.3
Haze_26951 Corylus avellana HOM05D006266 ORTHO05D008016 2.5e-15 85.9 112 43.8
unitig_52.g17681 Utricularia gibba HOM05D006266 ORTHO05D008016 2.8e-14 82.4 110 43.6
Haze_26227 Corylus avellana HOM05D006266 ORTHO05D008016 2.0e-12 76.3 109 37.6
CSS0006121 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 7.6e-12 74.3 54 72.2
AUR62002342 Chenopodium quinoa HOM05D006266 ORTHO05D008016 4.2e-10 68.6 56 62.5
AUR62023848 Chenopodium quinoa HOM05D006266 ORTHO05D008016 4.2e-10 68.6 56 62.5


User provided reference genes

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