Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0004806 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 2.8e-63 245.0 114 100.0
CSS0006887 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 1.3e-52 209.5 114 86.0
CSS0003221 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 1.5e-48 196.1 114 80.7
CSS0013543 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 3.7e-47 191.4 114 78.1
CSS0002147 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 8.3e-47 190.3 114 79.8
CSS0015259 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 1.1e-46 189.9 118 76.3
CSS0010240 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 1.4e-46 189.5 114 77.2
CSS0023038 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 4.3e-43 177.9 116 75.9
CSS0023820 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 9.5e-43 176.8 114 72.8
CSS0006571 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 2.2e-31 139.0 113 57.5
CSS0033855 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 2.9e-31 138.7 113 57.5
CSS0028555 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 4.9e-31 137.9 112 58.0
Actinidia22184 Actinidia chinensis HOM05D000455 ORTHO05D000434 3.2e-30 135.2 105 60.0
CSS0016602 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 9.2e-30 133.7 111 56.8
CSS0004654 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 2.1e-29 132.5 113 58.4
CSS0009299 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 2.1e-29 132.5 112 55.4
CSS0030203 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 1.7e-28 129.4 113 56.6
CSS0037267 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 1.7e-28 129.4 112 55.4
CSS0019902 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 1.5e-27 126.3 113 55.8
CSS0013856 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 1.4e-25 119.8 110 52.7
CSS0014323 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 4.0e-25 118.2 113 52.2
Atru.chr6.1396 Acer truncatum HOM05D000593 ORTHO05D000562 3.4e-24 115.2 95 58.9
Atru.chr2.576 Acer truncatum HOM05D000593 ORTHO05D000562 5.8e-24 114.4 92 58.7
Atru.chr4.890 Acer truncatum HOM05D000593 ORTHO05D000562 5.8e-24 114.4 98 55.1
Hma1.2p1_0179F.1_g079060 Hydrangea macrophylla HOM05D000593 ORTHO05D000562 7.6e-24 114.0 113 48.7
CANSAT54G0060 Cannabis sativa HOM05D003216 ORTHO05D002268 1.7e-23 112.8 113 43.4
CANSAT64G1746 Cannabis sativa HOM05D000593 ORTHO05D002268 3.8e-23 111.7 113 45.1
CANSAT64G1841 Cannabis sativa HOM05D000593 ORTHO05D002268 3.8e-23 111.7 113 45.1
Hma1.2p1_0622F.1_g190870 Hydrangea macrophylla HOM05D000593 ORTHO05D000562 3.8e-23 111.7 113 48.7
MD10G1032900 Malus domestica HOM05D000593 ORTHO05D000562 2.4e-22 109.0 94 56.4
Hma1.2p1_1172F.1_g263670 Hydrangea macrophylla HOM05D000593 ORTHO05D002268 7.1e-22 107.5 113 47.8
MD05G1031400 Malus domestica HOM05D000593 ORTHO05D000562 1.2e-21 106.7 94 55.3
Atru.chr1.3004 Acer truncatum HOM05D000593 ORTHO05D002268 2.7e-21 105.5 106 49.1
FvH4_7g04391 Fragaria vesca HOM05D000593 ORTHO05D000562 2.3e-20 102.4 97 50.5
RcHm_v2.0_Chr1g0329481 Rosa chinensis HOM05D000593 ORTHO05D000562 3.0e-20 102.1 94 53.2
MD08G1164400 Malus domestica HOM05D000593 ORTHO05D000562 3.9e-20 101.7 105 44.8
Rhsim01G0176400 Rhododendron simsii HOM05D003216 ORTHO05D002268 1.1e-19 100.1 105 46.7
Rhsim06G0090900 Rhododendron simsii HOM05D003216 ORTHO05D002268 1.1e-19 100.1 105 46.7
Atru.chr11.1014 Acer truncatum HOM05D000593 ORTHO05D000562 1.9e-19 99.4 106 47.2
TWI14G0423 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 2.5e-19 99.0 93 50.5
CSS0005100 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 4.3e-19 98.2 113 47.8
TWI73G0339 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 1.3e-18 96.7 113 47.8
TWI15G1236 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 1.6e-18 96.3 92 48.9
Atru.chr11.19 Acer truncatum HOM05D000593 ORTHO05D000562 2.1e-18 95.9 95 49.5
Atru.chr11.22 Acer truncatum HOM05D000593 ORTHO05D000562 2.1e-18 95.9 95 49.5
Lj6A78T35 Lonicera japonica HOM05D000011 ORTHO05D002639 4.8e-18 94.7 104 44.2
TWI53G1229 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 1.1e-17 93.6 94 47.9
CANSAT01G1396 Cannabis sativa HOM05D000593 ORTHO05D000562 5.3e-17 91.3 71 57.7
RcHm_v2.0_Chr7g0206311 Rosa chinensis HOM05D000593 ORTHO05D000562 1.5e-16 89.7 117 42.7
TWI74G1657 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 1.3e-15 86.7 107 43.0
RcHm_v2.0_Chr7g0206281 Rosa chinensis HOM05D000593 ORTHO05D002268 3.8e-15 85.1 78 55.1
TWI38G0080 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 2.4e-14 82.4 92 39.1
TWI73G0077 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 3.2e-14 82.0 106 38.7
TWI73G0826 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 3.2e-14 82.0 93 44.1
TWI75G1634 Tripterygium wilfordii HOM05D003216 ORTHO05D002268 4.2e-14 81.6 108 38.9
TWI38G0345 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 7.1e-14 80.9 94 41.5
TWI15G0761 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 1.2e-13 80.1 108 44.4
Phvul.008G000100 Phaseolus vulgaris HOM05D000593 ORTHO05D000562 2.1e-13 79.3 93 43.0
TWI63G1264 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 2.1e-13 79.3 106 38.7
Aqoxy1G00859 Aquilegia oxysepala HOM05D003216 ORTHO05D002268 2.7e-13 79.0 105 38.1
Aqoxy5G01684 Aquilegia oxysepala HOM05D000593 ORTHO05D000562 2.7e-13 79.0 105 38.1
TWI23G0100 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 2.7e-13 79.0 93 44.1
TWI09G0326 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 4.6e-13 78.2 87 43.7
TWI75G1234 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 7.9e-13 77.4 111 33.3
FvH4_5g13892 Fragaria vesca HOM05D000593 ORTHO05D002268 1.0e-12 77.0 97 42.3
TWI63G0793 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 1.0e-12 77.0 106 37.7
TWI75G0671 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 1.0e-12 77.0 106 37.7
TWI31G0828 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 3.0e-12 75.5 93 41.9
vmacro14527 Vaccinium macrocarpon HOM05D000593 ORTHO05D002268 6.7e-12 74.3 99 42.4
vmacro21289 Vaccinium macrocarpon HOM05D000593 ORTHO05D002268 6.7e-12 74.3 99 42.4
TWI59G1482 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 8.7e-12 73.9 93 41.9
TWI81G0406 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 1.1e-11 73.6 93 40.9
GSVIVG01023955001 Vitis vinifera HOM05D000593 ORTHO05D000562 1.1e-11 73.6 55 60.0
Ca_05375_v3 Cicer arietinum L. HOM05D003216 ORTHO05D002268 1.5e-11 73.2 90 43.3
TWI12G0364 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 1.5e-11 73.2 86 44.2
FvH4_4g16652 Fragaria vesca HOM05D000593 ORTHO05D000562 3.3e-11 72.0 95 41.1
TWI56G1292 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 3.3e-11 72.0 109 33.0
TWI81G0284 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 9.6e-11 70.5 80 46.2
Ca_14497_v3 Cicer arietinum L. HOM05D003216 ORTHO05D002268 2.8e-10 68.9 81 40.7
Ca_10000_v3 Cicer arietinum L. HOM05D000009 ORTHO05D000008 3.6e-10 68.6 90 41.1
FvH4_6g23211 Fragaria vesca HOM05D000045 ORTHO05D009940 4.8e-10 68.2 118 38.1
PSO190G0002 Papaver somniferum HOM05D013875 ORTHO05D002268 6.2e-10 67.8 97 38.1
PSO601G0026 Papaver somniferum HOM05D013875 ORTHO05D002268 6.2e-10 67.8 97 38.1
TWI38G1252 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 6.2e-10 67.8 93 40.9
Ca_13826_v3 Cicer arietinum L. HOM05D000593 ORTHO05D004526 8.1e-10 67.4 71 47.9
FvH4_6g38841 Fragaria vesca HOM05D003216 ORTHO05D002268 8.1e-10 67.4 91 40.7
PSO729G0107 Papaver somniferum HOM05D013875 ORTHO05D002268 8.1e-10 67.4 97 38.1
Ca_11910_v3 Cicer arietinum L. HOM05D003216 ORTHO05D002268 1.1e-09 67.0 100 36.0
FvH4_7g19111 Fragaria vesca HOM05D000593 ORTHO05D002268 1.1e-09 67.0 118 37.3
TWI36G1645 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 1.1e-09 67.0 93 40.9
TWI73G0096 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 1.1e-09 67.0 94 40.4
CSS0044639 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 1.4e-09 66.6 113 33.6
FvH4_5g20623 Fragaria vesca HOM05D000593 ORTHO05D000562 1.4e-09 66.6 125 33.6
TWI31G0531 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 1.4e-09 66.6 82 45.1
CSS0038546 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 1.8e-09 66.2 113 32.7
FvH4_6g12551 Fragaria vesca HOM05D000593 ORTHO05D002268 1.8e-09 66.2 94 40.4
TPR.G40224 Trifolium pratense HOM05D003216 ORTHO05D002268 2.4e-09 65.9 90 38.9
CSS0017978 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 3.1e-09 65.5 113 32.7
TWI59G1088 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 3.1e-09 65.5 87 36.8
CSS0009535 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 4.0e-09 65.1 107 33.6
TWI75G0109 Tripterygium wilfordii HOM05D003216 ORTHO05D002268 6.9e-09 64.3 93 37.6
Oeu064531.1 Olea europaea HOM05D000593 ORTHO05D002268 9.0e-09 63.9 54 59.3
TWI38G0853 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 1.5e-08 63.2 59 49.2
TWI81G0336 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 2.0e-08 62.8 80 42.5
TWI31G0510 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 2.6e-08 62.4 71 47.9
EL10Ac9g21154 Beta vulgaris HOM05D000593 ORTHO05D000562 3.4e-08 62.0 95 34.7
TWI63G0981 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 3.4e-08 62.0 106 33.0
CSS0040938 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 4.5e-08 61.6 113 32.7
Atru.chr3.1390 Acer truncatum HOM05D000593 ORTHO05D000562 5.8e-08 61.2 53 58.5
Atru.chr7.1886 Acer truncatum HOM05D000593 ORTHO05D000562 5.8e-08 61.2 55 56.4
TWI59G0546 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 5.8e-08 61.2 67 49.3
Medtr1g111720 Medicago truncatula HOM05D003216 ORTHO05D002268 7.6e-08 60.8 97 34.0
Aqoxy3G00378 Aquilegia oxysepala HOM05D003216 ORTHO05D002268 9.9e-08 60.5 102 37.3
HanXRQChr17g0552941 Helianthus annuus HOM05D000593 ORTHO05D000562 1.3e-07 60.1 99 32.3
TWI32G0254 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 1.3e-07 60.1 91 31.9
HanXRQChr05g0151291 Helianthus annuus HOM05D000593 ORTHO05D000562 1.7e-07 59.7 99 32.3
HanXRQChr08g0232231 Helianthus annuus HOM05D000593 ORTHO05D000562 1.7e-07 59.7 109 30.3
HanXRQChr13g0412791 Helianthus annuus HOM05D000593 ORTHO05D000562 1.7e-07 59.7 109 30.3
HanXRQChr15g0467831 Helianthus annuus HOM05D000593 ORTHO05D000562 1.7e-07 59.7 109 30.3
Oeu028054.1 Olea europaea HOM05D000593 ORTHO05D002268 2.9e-07 58.9 52 53.8
Atru.chr9.1259 Acer truncatum HOM05D000593 ORTHO05D002268 3.8e-07 58.5 53 58.5
FvH4_5g25511 Fragaria vesca HOM05D000593 ORTHO05D000562 4.9e-07 58.2 127 32.3
Ca_07608_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002268 6.4e-07 57.8 90 36.7
Ca_11017_v3 Cicer arietinum L. HOM05D003216 ORTHO05D002268 6.4e-07 57.8 93 33.3
Ca_14741_v3 Cicer arietinum L. HOM05D003326 ORTHO05D001185 6.4e-07 57.8 90 36.7
Oeu035640.1 Olea europaea HOM05D000593 ORTHO05D000562 6.4e-07 57.8 54 55.6
SGA_v2.0_scaffold106G30618 Striga asiatica HOM05D000593 ORTHO05D002268 8.4e-07 57.4 91 35.2
SGA_v2.0_scaffold126G33866 Striga asiatica HOM05D000593 ORTHO05D002268 8.4e-07 57.4 91 35.2
SGA_v2.0_scaffold17G08149 Striga asiatica HOM05D000593 ORTHO05D002268 8.4e-07 57.4 91 35.2
SGA_v2.0_scaffold1G00721 Striga asiatica HOM05D000593 ORTHO05D002268 8.4e-07 57.4 91 35.2
SGA_v2.0_scaffold22G09752 Striga asiatica HOM05D000593 ORTHO05D002268 8.4e-07 57.4 91 35.2
SGA_v2.0_scaffold286G47098 Striga asiatica HOM05D000164 ORTHO05D000096 8.4e-07 57.4 91 35.2
SGA_v2.0_scaffold31G12776 Striga asiatica HOM05D000593 ORTHO05D002268 8.4e-07 57.4 91 35.2
SGA_v2.0_scaffold57G20229 Striga asiatica HOM05D006226 ORTHO05D007738 8.4e-07 57.4 91 35.2
Medtr8g020437 Medicago truncatula HOM05D003216 ORTHO05D002268 1.9e-06 56.2 95 32.6
Medtr8g465330 Medicago truncatula HOM05D003216 ORTHO05D002268 2.4e-06 55.8 97 32.0
Medtr2g096070 Medicago truncatula HOM05D003216 ORTHO05D002268 3.2e-06 55.5 100 34.0
Medtr2g461120 Medicago truncatula HOM05D003216 ORTHO05D002268 3.2e-06 55.5 88 36.4
PSO339G0458 Papaver somniferum HOM05D000593 ORTHO05D002268 3.2e-06 55.5 90 33.3
CSS0038609 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 4.2e-06 55.1 113 30.1
Aqoxy7G02090 Aquilegia oxysepala HOM05D000593 ORTHO05D000562 5.5e-06 54.7 73 37.0
CSS0003309 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 7.1e-06 54.3 113 30.1
Medtr1g035110 Medicago truncatula HOM05D003216 ORTHO05D002268 9.3e-06 53.9 100 33.0


User provided reference genes

Program Settings