Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0004803 Camellia sinensis var. sinensis HOM05D004206 ORTHO05D003325 3.1e-165 585.1 301 100.0
Actinidia13126 Actinidia chinensis HOM05D004206 ORTHO05D003325 2.8e-70 269.6 304 55.3
Actinidia26442 Actinidia chinensis HOM05D004206 ORTHO05D003325 7.3e-66 255.0 306 55.9
Dinv35636 Davidia involucrata HOM05D004206 ORTHO05D003325 4.9e-62 242.3 309 52.8
Rhsim05G0188200 Rhododendron simsii HOM05D004206 ORTHO05D003325 9.8e-55 218.0 298 49.0
CSS0042901 Camellia sinensis var. sinensis HOM05D004206 ORTHO05D003325 3.5e-52 209.5 295 49.2
Hma1.2p1_1065F.1_g253750 Hydrangea macrophylla HOM05D004206 ORTHO05D003325 3.6e-49 199.5 318 46.2
Hma1.2p1_0350F.1_g132380 Hydrangea macrophylla HOM05D004206 ORTHO05D003325 1.8e-48 197.2 318 45.6
vmacro08670 Vaccinium macrocarpon HOM05D004206 ORTHO05D003325 2.6e-47 193.4 292 47.9
vmacro20128 Vaccinium macrocarpon HOM05D004206 ORTHO05D003325 4.1e-45 186.0 299 46.5
Lj3C971T5 Lonicera japonica HOM05D004206 ORTHO05D003325 5.1e-43 179.1 278 46.8
Actinidia05297 Actinidia chinensis HOM05D004206 ORTHO05D003325 6.6e-43 178.7 207 53.6
Cc06_g02970 Coffea canephora HOM05D004206 ORTHO05D003325 1.4e-40 171.0 269 43.1
Hma1.2p1_1707F.1_g298550 Hydrangea macrophylla HOM05D004206 ORTHO05D003325 1.4e-40 171.0 306 44.1
GSVIVG01025530001 Vitis vinifera HOM05D004206 ORTHO05D003325 9.9e-39 164.9 302 43.7
Oeu026485.2 Olea europaea HOM05D004206 ORTHO05D003325 9.6e-34 148.3 268 40.7
Oeu036176.1 Olea europaea HOM05D004206 ORTHO05D003325 6.2e-33 145.6 268 40.7
SalBow3G3817 Salvia bowleyana HOM05D004206 ORTHO05D003325 1.5e-31 141.0 305 39.7
Actinidia11245 Actinidia chinensis HOM05D004206 ORTHO05D003325 1.3e-30 137.9 300 38.3
DCAR_009254 Daucus carota HOM05D004206 ORTHO05D003325 4.9e-30 136.0 307 39.4
Nitab4.5_0000349g0070 Nicotiana tabacum HOM05D004206 ORTHO05D003325 6.4e-30 135.6 278 41.0
Nitab4.5_0000527g0130 Nicotiana tabacum HOM05D004206 ORTHO05D003325 5.4e-29 132.5 277 39.7
Nitab4.5_0002077g0110 Nicotiana tabacum HOM05D004206 ORTHO05D003325 4.6e-28 129.4 279 35.5
TAR633G1790 Trochodendron aralioides HOM05D004206 ORTHO05D003325 2.3e-27 127.1 307 38.4
Peaxi162Scf00407g00067 Petunia axillaris HOM05D004206 ORTHO05D003325 3.0e-27 126.7 281 37.7
MSTRG.5685 Avicennia marina HOM05D004206 ORTHO05D003325 1.1e-26 124.8 145 55.2
HanXRQChr07g0196151 Helianthus annuus HOM05D004206 ORTHO05D003325 4.3e-26 122.9 276 38.0
Peaxi162Scf00039g01222 Petunia axillaris HOM05D004206 ORTHO05D003325 4.3e-26 122.9 279 36.9
Sopen09g005150 Solanum pennellii HOM05D004206 ORTHO05D003325 7.3e-26 122.1 291 37.5
RcHm_v2.0_Chr3g0467301 Rosa chinensis HOM05D004206 ORTHO05D003325 9.6e-26 121.7 325 34.2
Solyc09g010410.3 Solanum lycopersicum HOM05D004206 ORTHO05D003325 1.3e-25 121.3 281 38.8
MD04G1121200 Malus domestica HOM05D004206 ORTHO05D003325 2.1e-25 120.6 242 39.3
Atru.chr8.1956 Acer truncatum HOM05D004206 ORTHO05D003325 6.2e-25 119.0 263 40.3
PGSC0003DMG401019213 Solanum tuberosum HOM05D004206 ORTHO05D003325 8.1e-25 118.6 281 38.1
Duzib093G1984 Durio zibethinus HOM05D004206 ORTHO05D003325 1.1e-24 118.2 262 38.5
PGSC0003DMG400008929 Solanum tuberosum HOM05D004206 ORTHO05D003325 1.4e-24 117.9 224 41.1
SGA_v2.0_scaffold126G33821 Striga asiatica HOM05D004206 ORTHO05D003325 1.8e-24 117.5 316 36.4
Lj2A99T58 Lonicera japonica HOM05D004206 ORTHO05D003325 2.4e-24 117.1 321 38.0
FAN02G2861 Fragaria x ananassa HOM05D004206 ORTHO05D003325 5.3e-24 115.9 245 38.8
FAN05G4716 Fragaria x ananassa HOM05D004206 ORTHO05D003325 9.0e-24 115.2 243 39.5
CAN.G97.20 Capsicum annuum HOM05D004206 ORTHO05D003325 1.5e-23 114.4 317 33.1
MD12G1138400 Malus domestica HOM05D004206 ORTHO05D003325 2.0e-23 114.0 239 38.5
ECA233G2126 Erigeron canadensis HOM05D004206 ORTHO05D003325 3.4e-23 113.2 270 36.7
Gohir.A04G080300 Gossypium hirsutum HOM05D004206 ORTHO05D003325 7.6e-23 112.1 147 49.7
FvH4_6g14310 Fragaria vesca HOM05D004206 ORTHO05D003325 1.7e-22 110.9 245 38.0
Sopen10g035740 Solanum pennellii HOM05D004206 ORTHO05D003325 1.7e-22 110.9 297 36.7
FAN09G1551 Fragaria x ananassa HOM05D004206 ORTHO05D003325 2.9e-22 110.2 245 38.4
SalBow4G2008 Salvia bowleyana HOM05D004206 ORTHO05D003325 6.4e-22 109.0 196 40.3
Dinv37205 Davidia involucrata HOM05D004206 ORTHO05D003325 5.4e-21 105.9 131 51.1
MSTRG.26756 Avicennia marina HOM05D004206 ORTHO05D003325 7.1e-21 105.5 135 51.1
Lalb_Chr25g0289551 Lupinus albus HOM05D004206 ORTHO05D003325 7.1e-21 105.5 269 36.4
Glyma.19G173300 Glycine max HOM05D004206 ORTHO05D003325 9.3e-21 105.1 287 37.6
Manes.08G076700 Manihot esculenta HOM05D004206 ORTHO05D003325 9.3e-21 105.1 143 47.6
Prupe.6G250300 Prunus persica HOM05D004206 ORTHO05D003325 9.3e-21 105.1 332 32.5
AUR62037393 Chenopodium quinoa HOM05D004206 ORTHO05D003325 1.6e-20 104.4 302 33.4
Thecc.05G044400 Theobroma cacao HOM05D004206 ORTHO05D003325 1.6e-20 104.4 260 35.8
Glyma.03G172400 Glycine max HOM05D004206 ORTHO05D003325 2.7e-20 103.6 275 34.9
Nitab4.5_0009149g0020 Nicotiana tabacum HOM05D004206 ORTHO05D003325 2.7e-20 103.6 317 33.1
Haze_20742 Corylus avellana HOM05D004206 ORTHO05D003325 3.5e-20 103.2 244 37.7
Migut.J00362 Erythranthe guttata HOM05D004206 ORTHO05D003325 6.0e-20 102.4 298 33.6
Gohir.D09G153700 Gossypium hirsutum HOM05D004206 ORTHO05D003325 6.0e-20 102.4 263 34.6
HanXRQChr14g0453751 Helianthus annuus HOM05D004206 ORTHO05D003325 7.9e-20 102.1 277 35.7
Solyc10g086360.2 Solanum lycopersicum HOM05D004206 ORTHO05D003325 7.9e-20 102.1 249 37.8
Lalb_Chr02g0153081 Lupinus albus HOM05D004206 ORTHO05D003325 1.0e-19 101.7 212 40.6
Hund00876 Selenicereus undatus HOM05D004206 ORTHO05D003325 1.8e-19 100.9 302 34.8
arahy.Tifrunner.gnm1.ann1.72TEPU Arachis hypogaea HOM05D004206 ORTHO05D003325 5.1e-19 99.4 269 36.8
Gohir.A09G158300 Gossypium hirsutum HOM05D004206 ORTHO05D003325 8.7e-19 98.6 262 34.7
Ca_08787_v3 Cicer arietinum L. HOM05D004206 ORTHO05D003325 1.1e-18 98.2 268 34.7
Gohir.D04G119400 Gossypium hirsutum HOM05D004206 ORTHO05D003325 1.1e-18 98.2 147 46.9
Gorai.012G101500 Gossypium raimondii HOM05D004206 ORTHO05D003325 1.1e-18 98.2 147 46.9
CANSAT35G0311 Cannabis sativa HOM05D004206 ORTHO05D003325 1.9e-18 97.4 216 36.1
AUR62041741 Chenopodium quinoa HOM05D004206 ORTHO05D003325 1.9e-18 97.4 276 34.8
Gorai.006G175200 Gossypium raimondii HOM05D004206 ORTHO05D003325 1.9e-18 97.4 262 33.6
Phvul.001G170100 Phaseolus vulgaris HOM05D004206 ORTHO05D003325 2.5e-18 97.1 275 35.6
Duzib106G1929 Durio zibethinus HOM05D004206 ORTHO05D003325 4.3e-18 96.3 148 45.3
EL10Ac9g20956 Beta vulgaris HOM05D004206 ORTHO05D003325 7.4e-18 95.5 277 34.3
Lalb_Chr21g0314341 Lupinus albus HOM05D004206 ORTHO05D003325 9.6e-18 95.1 256 34.4
QL05p010542 Quercus lobata HOM05D004206 ORTHO05D003325 9.6e-18 95.1 273 38.1
TWI74G0821 Tripterygium wilfordii HOM05D004206 ORTHO05D003325 9.6e-18 95.1 296 34.5
Oeu049209.1 Olea europaea HOM05D004206 ORTHO05D003325 1.3e-17 94.7 234 37.2
CiPaw.09G188800 Carya illinoinensis HOM05D004206 ORTHO05D003325 1.6e-17 94.4 275 31.6
Ciclev10012502m.g Citrus clementina HOM05D004206 ORTHO05D003325 1.6e-17 94.4 276 35.1
QL07p047329 Quercus lobata HOM05D004206 ORTHO05D003325 2.8e-17 93.6 275 36.7
Aqoxy2G02033 Aquilegia oxysepala HOM05D004206 ORTHO05D003325 3.7e-17 93.2 295 33.2
Cfa017429 Carpinus fangiana HOM05D004206 ORTHO05D003325 3.7e-17 93.2 244 36.1
Hund07780 Selenicereus undatus HOM05D004206 ORTHO05D003325 3.7e-17 93.2 154 44.2
TAR371G1160 Trochodendron aralioides HOM05D004206 ORTHO05D003325 4.8e-17 92.8 209 44.0
PGR004G1990 Punica granatum HOM05D004206 ORTHO05D003325 1.1e-16 91.7 276 34.8
CiPaw.10G143300 Carya illinoinensis HOM05D004206 ORTHO05D003325 1.4e-16 91.3 268 34.7
ECA238G1623 Erigeron canadensis HOM05D000150 ORTHO05D000108 3.1e-16 90.1 296 31.4
Hma1.2p1_1535F.1_g289470 Hydrangea macrophylla HOM05D004206 ORTHO05D003325 3.1e-16 90.1 138 43.5
Lalb_Chr06g0171041 Lupinus albus HOM05D004206 ORTHO05D003325 3.1e-16 90.1 270 33.0
Lalb_Chr20g0113171 Lupinus albus HOM05D004206 ORTHO05D003325 9.0e-16 88.6 256 35.5
VMungo0720G2610 Vigna mungo HOM05D004206 ORTHO05D003325 9.0e-16 88.6 260 33.8
Aqoxy4G02996 Aquilegia oxysepala HOM05D004206 ORTHO05D003325 1.2e-15 88.2 311 32.2
Lsat_1_v5_gn_2_110540 Lactuca sativa HOM05D004206 ORTHO05D003325 1.2e-15 88.2 272 33.8
Phvul.007G158100 Phaseolus vulgaris HOM05D004206 ORTHO05D003325 1.5e-15 87.8 279 34.4
Duzib128G2059 Durio zibethinus HOM05D004206 ORTHO05D003325 2.0e-15 87.4 268 33.2
Medtr7g099950 Medicago truncatula HOM05D004206 ORTHO05D003325 2.0e-15 87.4 271 33.2
PGR004G0289 Punica granatum HOM05D004206 ORTHO05D003325 4.5e-15 86.3 151 43.7
Lsat_1_v5_gn_1_55680 Lactuca sativa HOM05D004206 ORTHO05D003325 7.6e-15 85.5 297 34.7
Manes.09G086700 Manihot esculenta HOM05D004206 ORTHO05D003325 2.9e-14 83.6 184 39.7
Potri.006G082100 Populus trichocarpa HOM05D004206 ORTHO05D003325 3.8e-14 83.2 158 41.1
Sc01g0003990 Simmondsia chinensis HOM05D004206 ORTHO05D003325 4.9e-14 82.8 298 28.9
Glyma.10G044400 Glycine max HOM05D004206 ORTHO05D003325 4.2e-13 79.7 275 32.7
Gohir.A11G326100 Gossypium hirsutum HOM05D004206 ORTHO05D003325 1.6e-12 77.8 155 36.8
MBI05_g10357_MAGBIO Magnolia biondii HOM05D004206 ORTHO05D003325 1.6e-12 77.8 311 31.2
SGA_v2.0_scaffold75G24932 Striga asiatica HOM05D004206 ORTHO05D003325 1.6e-12 77.8 309 30.7
VMungo1383G1995 Vigna mungo HOM05D004206 ORTHO05D003325 1.6e-12 77.8 276 32.6
Sabra06G0062000 Salix brachista HOM05D004206 ORTHO05D003325 2.1e-12 77.4 143 42.7
Eucgr.K03159 Eucalyptus grandis HOM05D004206 ORTHO05D003325 3.5e-12 76.6 295 29.5
TWI77G0356 Tripterygium wilfordii HOM05D004206 ORTHO05D003325 4.6e-12 76.3 265 34.7
Lj1g0028211 Lotus japonicus HOM05D004206 ORTHO05D003325 6.0e-12 75.9 217 32.7
MELO3C009278.2 Cucumis melo HOM05D004206 ORTHO05D003325 7.9e-12 75.5 262 30.5
Ca_09615_v3 Cicer arietinum L. HOM05D004206 ORTHO05D003325 1.0e-11 75.1 256 35.5
TWI53G0070 Tripterygium wilfordii HOM05D004206 ORTHO05D003325 3.9e-11 73.2 282 30.9
PSO339G0439 Papaver somniferum HOM05D004206 ORTHO05D003325 8.7e-11 72.0 318 31.4
Cpa.g.sc11.170 Carica papaya HOM05D004206 ORTHO05D003325 1.5e-10 71.2 168 35.7
ClCG10G020930 Citrullus lanatus HOM05D004206 ORTHO05D003325 3.3e-10 70.1 267 28.8
PSO206G0053 Papaver somniferum HOM05D004206 ORTHO05D003325 5.6e-10 69.3 258 32.9
MSTRG.19101 Avicennia marina HOM05D004206 ORTHO05D003325 7.4e-10 68.9 182 35.2
TAR636G0761 Trochodendron aralioides HOM05D004206 ORTHO05D003325 1.6e-09 67.8 139 39.6
Medtr1g068825 Medicago truncatula HOM05D004206 ORTHO05D003325 2.8e-09 67.0 241 33.2
Gohir.D11G345000 Gossypium hirsutum HOM05D004206 ORTHO05D003325 1.4e-08 64.7 150 35.3
Gorai.007G375400 Gossypium raimondii HOM05D004206 ORTHO05D003325 2.4e-08 63.9 150 35.3
Sc20g0004600 Simmondsia chinensis HOM05D004206 ORTHO05D003325 2.4e-08 63.9 149 36.2
TPR.G21456 Trifolium pratense HOM05D004206 ORTHO05D003325 4.0e-08 63.2 228 33.3
CsaV3_3G035080 Cucumis sativus L. HOM05D004206 ORTHO05D003325 2.0e-07 60.8 291 27.8
Os05g0113500 Oryza sativa ssp. japonica HOM05D004206 ORTHO05D003325 2.0e-07 60.8 225 28.4
PSO648G0001 Papaver somniferum HOM05D004206 ORTHO05D003325 2.0e-07 60.8 199 31.7
unitig_578.g15702 Utricularia gibba HOM05D004206 ORTHO05D003325 2.0e-07 60.8 86 47.7
Eucgr.A01242 Eucalyptus grandis HOM05D004206 ORTHO05D003325 4.5e-07 59.7 177 32.2
Zm00001eb266560 Zea mays HOM05D019293 ORTHO05D003325 7.6e-07 58.9 161 32.9
CDE09G0187 Ceratophyllum demersum HOM05D004206 ORTHO05D003325 1.3e-06 58.2 185 29.2
HanXRQChr14g0459281 Helianthus annuus HOM05D004206 ORTHO05D003325 1.7e-06 57.8 50 62.0
THA.LOC104805432 Tarenaya hassleriana HOM05D008508 ORTHO05D003325 1.7e-06 57.8 137 38.0
Lsat_1_v5_gn_1_55700 Lactuca sativa HOM05D004206 ORTHO05D003325 2.9e-06 57.0 88 48.9
ATR0559G289 Amborella trichopoda HOM05D004206 ORTHO05D003325 4.9e-06 56.2 301 26.2
Psat6g067720 Pisum sativum HOM05D004206 ORTHO05D003325 4.9e-06 56.2 253 29.6
Lsat_1_v5_gn_2_110560 Lactuca sativa HOM05D000437 ORTHO05D003325 6.5e-06 55.8 68 50.0
Actinidia07050 Actinidia chinensis HOM05D004206 ORTHO05D003325 8.4e-06 55.5 173 37.6
PGR004G2702 Punica granatum HOM05D004206 ORTHO05D003325 8.4e-06 55.5 238 29.4


User provided reference genes

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