Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0004784 Camellia sinensis var. sinensis HOM05D002546 ORTHO05D002671 8.4e-104 380.6 222 100.0
CSS0038427 Camellia sinensis var. sinensis HOM05D002546 ORTHO05D002671 1.2e-44 184.1 251 47.8
Dinv35341 Davidia involucrata HOM05D000736 ORTHO05D002671 1.7e-40 170.2 221 45.7
Solyc03g083070.3 Solanum lycopersicum HOM05D002546 ORTHO05D002671 2.9e-35 152.9 241 40.2
Hma1.2p1_1587F.1_g292300 Hydrangea macrophylla HOM05D002546 ORTHO05D002671 6.4e-35 151.8 237 46.0
Hma1.2p1_0404F.1_g145300 Hydrangea macrophylla HOM05D002546 ORTHO05D002671 8.3e-35 151.4 237 45.6
Sopen03g022870 Solanum pennellii HOM05D002546 ORTHO05D002671 1.1e-34 151.0 241 39.8
Actinidia06145 Actinidia chinensis HOM05D002546 ORTHO05D002671 1.4e-34 150.6 221 46.2
PGSC0003DMG400018551 Solanum tuberosum HOM05D002546 ORTHO05D002671 7.1e-34 148.3 240 40.0
Rhsim09G0206000 Rhododendron simsii HOM05D002546 ORTHO05D002671 1.6e-33 147.1 249 46.6
Oeu060990.1 Olea europaea HOM05D002546 ORTHO05D002671 1.3e-32 144.1 255 38.8
Dinv29272 Davidia involucrata HOM05D002546 ORTHO05D002671 1.5e-31 140.6 125 57.6
Hma1.2p1_1507F.1_g287620 Hydrangea macrophylla HOM05D002546 ORTHO05D002671 1.5e-31 140.6 234 41.0
Cc02_g01470 Coffea canephora HOM05D002546 ORTHO05D002671 1.1e-29 134.4 240 37.5
Migut.F00205 Erythranthe guttata HOM05D002546 ORTHO05D002671 8.9e-29 131.3 242 36.8
CAN.G481.18 Capsicum annuum HOM05D002546 ORTHO05D002671 1.2e-28 131.0 250 36.0
vmacro10125 Vaccinium macrocarpon HOM05D002546 ORTHO05D002671 2.0e-28 130.2 227 41.9
Oeu037180.2 Olea europaea HOM05D002546 ORTHO05D002671 5.8e-28 128.6 262 34.4
Oeu010693.1 Olea europaea HOM05D002546 ORTHO05D002671 1.3e-27 127.5 252 36.1
Nitab4.5_0007005g0010 Nicotiana tabacum HOM05D002546 ORTHO05D002671 3.8e-27 125.9 249 35.7
Nitab4.5_0005393g0010 Nicotiana tabacum HOM05D002546 ORTHO05D002671 1.1e-26 124.4 253 34.8
DCAR_010596 Daucus carota HOM05D002546 ORTHO05D002671 1.2e-25 120.9 228 35.1
TAR374G0327 Trochodendron aralioides HOM05D002546 ORTHO05D002671 1.6e-25 120.6 226 36.3
SGA_v2.0_scaffold13G06539 Striga asiatica HOM05D002546 ORTHO05D002671 1.0e-24 117.9 224 35.3
Peaxi162Scf00740g00014 Petunia axillaris HOM05D002546 ORTHO05D002671 1.7e-24 117.1 256 33.6
Migut.F01026 Erythranthe guttata HOM05D002546 ORTHO05D002671 2.3e-24 116.7 126 48.4
Sed0003835 Sechium edule HOM05D002546 ORTHO05D002671 3.0e-24 116.3 225 37.3
SGA_v2.0_scaffold192G40535 Striga asiatica HOM05D002546 ORTHO05D002671 3.0e-24 116.3 228 35.1
MSTRG.8649 Avicennia marina HOM05D002546 ORTHO05D002671 1.5e-23 114.0 242 33.9
Manes.01G184100 Manihot esculenta HOM05D002546 ORTHO05D002671 4.3e-23 112.5 256 32.4
Cfa016236 Carpinus fangiana HOM05D002546 ORTHO05D002671 7.3e-23 111.7 236 33.9
SalBow4G2158 Salvia bowleyana HOM05D002546 ORTHO05D002671 9.6e-23 111.3 118 49.2
unitig_90.g27524 Utricularia gibba HOM05D002546 ORTHO05D002671 9.6e-23 111.3 123 44.7
Duzib205G0023 Durio zibethinus HOM05D002546 ORTHO05D002671 1.2e-22 110.9 253 34.4
Haze_00205 Corylus avellana HOM05D002546 ORTHO05D002671 2.1e-22 110.2 236 33.5
SGA_v2.0_scaffold55G19774 Striga asiatica HOM05D002546 ORTHO05D002671 2.1e-22 110.2 227 33.0
CiPaw.06G045700 Carya illinoinensis HOM05D002546 ORTHO05D002671 2.8e-22 109.8 236 33.1
ClCG09G018560 Citrullus lanatus HOM05D002546 ORTHO05D002671 2.8e-22 109.8 233 33.0
TWI39G0578 Tripterygium wilfordii HOM05D002546 ORTHO05D002671 3.6e-22 109.4 240 34.6
TAR375G0270 Trochodendron aralioides HOM05D002546 ORTHO05D002671 6.2e-22 108.6 136 44.9
Prupe.2G309300 Prunus persica HOM05D002546 ORTHO05D002671 8.1e-22 108.2 234 34.2
DCAR_020324 Daucus carota HOM05D000156 ORTHO05D005692 1.4e-21 107.5 228 36.4
Duzib084G1168 Durio zibethinus HOM05D002546 ORTHO05D002671 1.8e-21 107.1 243 32.1
Thecc.03G200000 Theobroma cacao HOM05D002546 ORTHO05D002671 3.1e-21 106.3 242 32.2
CiPaw.05G197400 Carya illinoinensis HOM05D002546 ORTHO05D002671 4.0e-21 105.9 234 32.5
PSO832G4337 Papaver somniferum HOM05D002546 ORTHO05D002671 5.2e-21 105.5 225 33.8
Potri.015G012300 Populus trichocarpa HOM05D002546 ORTHO05D002671 5.2e-21 105.5 248 32.7
Sabra15G0009900 Salix brachista HOM05D002546 ORTHO05D002671 8.9e-21 104.8 240 33.8
Sed0021708 Sechium edule HOM05D002546 ORTHO05D002671 8.9e-21 104.8 231 31.6
Atru.chr12.2223 Acer truncatum HOM05D002546 ORTHO05D002671 1.2e-20 104.4 248 35.9
THA.LOC104825149 Tarenaya hassleriana HOM05D002546 ORTHO05D002671 2.0e-20 103.6 244 30.7
Lsat_1_v5_gn_8_5280 Lactuca sativa HOM05D002546 ORTHO05D002671 2.6e-20 103.2 126 46.0
THA.LOC104811915 Tarenaya hassleriana HOM05D002546 ORTHO05D002671 4.4e-20 102.4 254 31.5
QL09p008716 Quercus lobata HOM05D002546 ORTHO05D002671 9.9e-20 101.3 235 33.2
Aqoxy5G04280 Aquilegia oxysepala HOM05D002546 ORTHO05D002671 1.3e-19 100.9 240 32.9
Sc13g0009890 Simmondsia chinensis HOM05D002546 ORTHO05D002671 1.3e-19 100.9 230 33.0
MELO3C021488.2 Cucumis melo HOM05D002546 ORTHO05D002671 2.2e-19 100.1 239 30.1
MD01G1217900 Malus domestica HOM05D002546 ORTHO05D002671 2.2e-19 100.1 233 32.2
Cpa.g.sc3.94 Carica papaya HOM05D002546 ORTHO05D002671 2.9e-19 99.8 248 31.5
MBI07_g37203_MAGBIO Magnolia biondii HOM05D002546 ORTHO05D002671 2.9e-19 99.8 225 36.0
Potri.012G016400 Populus trichocarpa HOM05D002546 ORTHO05D002671 8.4e-19 98.2 245 31.8
THA.LOC104799973 Tarenaya hassleriana HOM05D002546 ORTHO05D002671 5.4e-18 95.5 120 37.5
CANSAT54G0351 Cannabis sativa HOM05D002546 ORTHO05D002671 7.1e-18 95.1 255 33.7
Manes.02G143800 Manihot esculenta HOM05D002546 ORTHO05D002671 7.1e-18 95.1 118 43.2
PSO210G6801 Papaver somniferum HOM05D002546 ORTHO05D002671 7.1e-18 95.1 205 32.2
Gohir.A12G249500 Gossypium hirsutum HOM05D002546 ORTHO05D002671 1.2e-17 94.4 236 32.6
Lalb_Chr11g0066921 Lupinus albus HOM05D002546 ORTHO05D002671 3.5e-17 92.8 225 34.2
RcHm_v2.0_Chr1g0380501 Rosa chinensis HOM05D002546 ORTHO05D002671 4.6e-17 92.4 235 31.1
Aa31LG3G9480 Aethionema arabicum HOM05D002546 ORTHO05D002671 7.8e-17 91.7 250 28.4
Gohir.D12G250300 Gossypium hirsutum HOM05D002546 ORTHO05D002671 7.8e-17 91.7 245 32.2
EL10Ac3g05273 Beta vulgaris HOM05D002546 ORTHO05D002671 1.0e-16 91.3 250 31.2
TPR.G19364 Trifolium pratense HOM05D002546 ORTHO05D002671 1.0e-16 91.3 220 34.5
CsaV3_5G037670 Cucumis sativus L. HOM05D002546 ORTHO05D002671 1.7e-16 90.5 140 37.1
Lalb_Chr08g0240191 Lupinus albus HOM05D002546 ORTHO05D002671 1.7e-16 90.5 232 33.2
Ah.07g205550 Amaranthus hybridus HOM05D002546 ORTHO05D002671 3.0e-16 89.7 249 30.9
Gorai.008G268400 Gossypium raimondii HOM05D002546 ORTHO05D002671 3.0e-16 89.7 245 32.2
PGR142G3961 Punica granatum HOM05D002546 ORTHO05D002671 5.1e-16 89.0 240 30.8
MD07G1287600 Malus domestica HOM05D002546 ORTHO05D002671 1.9e-15 87.0 232 30.2
Carub.0008s1319 Capsella rubella HOM05D002546 ORTHO05D002671 2.5e-15 86.7 263 28.5
AL7G24810 Arabidopsis lyrata HOM05D002546 ORTHO05D002671 1.6e-14 84.0 128 38.3
Medtr3g091610 Medicago truncatula HOM05D002546 ORTHO05D002671 1.6e-14 84.0 229 31.0
Psat5g076720 Pisum sativum HOM05D002546 ORTHO05D002671 1.6e-14 84.0 222 33.8
FvH4_7g31440 Fragaria vesca HOM05D002546 ORTHO05D002671 2.8e-14 83.2 235 29.4
C07p55760 Brassica napus HOM05D002546 ORTHO05D002671 3.6e-14 82.8 219 29.2
BolC2t08030H Brassica oleracea HOM05D002546 ORTHO05D002671 3.6e-14 82.8 254 26.8
HanXRQChr08g0225361 Helianthus annuus HOM05D002546 ORTHO05D002671 3.6e-14 82.8 117 41.9
Thhalv10025998m.g Eutrema salsugineum HOM05D002546 ORTHO05D002671 4.8e-14 82.4 131 36.6
FAN03G1114 Fragaria x ananassa HOM05D002546 ORTHO05D002671 4.8e-14 82.4 238 29.0
FAN10G2266 Fragaria x ananassa HOM05D002546 ORTHO05D002671 4.8e-14 82.4 238 27.7
COL.COLO4_16770 Corchorus olitorius HOM05D000513 ORTHO05D007779 6.2e-14 82.0 122 37.7
FAN01G0698 Fragaria x ananassa HOM05D002546 ORTHO05D002671 8.1e-14 81.6 238 28.6
A03p57540 Brassica napus HOM05D002546 ORTHO05D002671 1.4e-13 80.9 230 28.7
C02p18890 Brassica napus HOM05D002546 ORTHO05D002671 1.4e-13 80.9 258 27.1
BraA03t14822Z Brassica rapa HOM05D002546 ORTHO05D002671 1.4e-13 80.9 230 28.7
FAN06G2719 Fragaria x ananassa HOM05D002546 ORTHO05D002671 1.4e-13 80.9 238 27.7
MBI06_g10865_MAGBIO Magnolia biondii HOM05D000078 ORTHO05D002671 1.8e-13 80.5 219 32.0
Sp6g15150 Schrenkiella parvula HOM05D002546 ORTHO05D002671 2.4e-13 80.1 246 27.2
Carub.0007s1300 Capsella rubella HOM05D000073 ORTHO05D000033 3.1e-13 79.7 122 37.7
AT5G52990 Arabidopsis thaliana HOM05D002546 ORTHO05D002671 4.0e-13 79.3 252 26.6
Thhalv10016082m.g Eutrema salsugineum HOM05D002546 ORTHO05D002671 5.3e-13 79.0 259 27.4
CARHR265980 Cardamine hirsuta HOM05D002546 ORTHO05D002671 6.9e-13 78.6 253 26.9
BolC7t46054H Brassica oleracea HOM05D002546 ORTHO05D002671 9.0e-13 78.2 230 27.0
Eucgr.K00388 Eucalyptus grandis HOM05D002546 ORTHO05D002671 9.0e-13 78.2 245 27.8
AL4G21080 Arabidopsis lyrata HOM05D002546 ORTHO05D002671 1.5e-12 77.4 124 33.1
FAN06G0879 Fragaria x ananassa HOM05D002546 ORTHO05D002671 2.0e-12 77.0 119 36.1
AT4G27840 Arabidopsis thaliana HOM05D002546 ORTHO05D002671 2.6e-12 76.6 122 36.1
AL8G27590 Arabidopsis lyrata HOM05D002546 ORTHO05D002671 3.4e-12 76.3 251 25.9
BcaC03g14467 Brassica carinata HOM05D002546 ORTHO05D002671 3.4e-12 76.3 235 25.5
C09p42700 Brassica napus HOM05D002546 ORTHO05D002671 4.5e-12 75.9 122 32.8
BolC9t57146H Brassica oleracea HOM05D002546 ORTHO05D002671 4.5e-12 75.9 122 32.8
SEGI_19070 Sequoiadendron giganteum HOM05D002546 ORTHO05D002671 4.5e-12 75.9 114 38.6
Ca_16712_v3 Cicer arietinum L. HOM05D002546 ORTHO05D002671 7.6e-12 75.1 220 30.0
AUR62006084 Chenopodium quinoa HOM05D002546 ORTHO05D002671 1.7e-11 73.9 123 38.2
AUR62019410 Chenopodium quinoa HOM05D002546 ORTHO05D002671 1.7e-11 73.9 123 38.2
Phvul.009G052000 Phaseolus vulgaris HOM05D002546 ORTHO05D002671 1.7e-11 73.9 225 30.7
BcaB05g21997 Brassica carinata HOM05D002546 ORTHO05D002671 6.4e-11 72.0 241 25.7
A02p11380 Brassica napus HOM05D002546 ORTHO05D002671 6.4e-11 72.0 235 26.4
Glyma.06G129500 Glycine max HOM05D002546 ORTHO05D002671 6.4e-11 72.0 221 38.9
arahy.Tifrunner.gnm1.ann1.D1PG31 Arachis hypogaea HOM05D002546 ORTHO05D002671 8.4e-11 71.6 247 27.5
A10p10470 Brassica napus HOM05D002546 ORTHO05D002671 1.1e-10 71.2 123 31.7
BraA10t43130Z Brassica rapa HOM05D002546 ORTHO05D002671 1.1e-10 71.2 123 31.7
arahy.Tifrunner.gnm1.ann1.DAH91N Arachis hypogaea HOM05D002546 ORTHO05D002671 1.4e-10 70.9 247 28.3
BraA02t06202Z Brassica rapa HOM05D002546 ORTHO05D002671 1.9e-10 70.5 235 26.0
Glyma.04G235100 Glycine max HOM05D002546 ORTHO05D002671 1.9e-10 70.5 230 27.8
PGSC0003DMG400033147 Solanum tuberosum HOM05D002546 ORTHO05D002671 3.2e-10 69.7 122 32.8
CAN.G14.44 Capsicum annuum HOM05D002546 ORTHO05D002671 7.1e-10 68.6 119 31.1
VMungo1080G1313 Vigna mungo HOM05D002546 ORTHO05D002671 7.1e-10 68.6 125 32.8
CARHR235550 Cardamine hirsuta HOM05D002546 ORTHO05D002671 1.6e-09 67.4 239 26.8
Solyc06g064430.1 Solanum lycopersicum HOM05D002546 ORTHO05D002671 1.6e-09 67.4 122 32.0
Lj1g0024019 Lotus japonicus HOM05D002546 ORTHO05D002671 2.7e-09 66.6 230 29.1
Sopen06g022900 Solanum pennellii HOM05D002546 ORTHO05D002671 2.7e-09 66.6 122 32.0
Lj3g0008234 Lotus japonicus HOM05D002546 ORTHO05D002671 4.6e-09 65.9 119 32.8
AL8G27530 Arabidopsis lyrata HOM05D002546 ORTHO05D002671 1.0e-08 64.7 222 27.9
Nn1g08407 Nelumbo nucifera HOM05D002546 ORTHO05D002671 1.0e-08 64.7 119 33.6
Cfa008037 Carpinus fangiana HOM05D002546 ORTHO05D002671 3.9e-08 62.8 114 31.6
QL09p001240 Quercus lobata HOM05D002546 ORTHO05D002671 6.7e-08 62.0 120 31.7
BcaC06g32660 Brassica carinata HOM05D002546 ORTHO05D002671 8.7e-08 61.6 226 23.9
TAR381G0560 Trochodendron aralioides HOM05D002546 ORTHO05D002671 8.7e-08 61.6 125 31.2
Actinidia29364 Actinidia chinensis HOM05D002546 ORTHO05D002671 1.1e-07 61.2 119 30.3
COL.COLO4_32380 Corchorus olitorius HOM05D002546 ORTHO05D002671 1.1e-07 61.2 119 31.9
FAN19G1374 Fragaria x ananassa HOM05D002546 ORTHO05D002671 1.1e-07 61.2 118 32.2
Dinv37399 Davidia involucrata HOM05D002546 ORTHO05D002671 1.9e-07 60.5 119 31.1
MD05G1005900 Malus domestica HOM05D002546 ORTHO05D002671 1.9e-07 60.5 120 33.3
FvH4_2g00290 Fragaria vesca HOM05D002546 ORTHO05D002671 3.3e-07 59.7 112 32.1
RcHm_v2.0_Chr1g0359031 Rosa chinensis HOM05D002546 ORTHO05D002671 3.3e-07 59.7 94 36.2
Medtr3g010290 Medicago truncatula HOM05D002546 ORTHO05D002671 1.6e-06 57.4 119 31.1
arahy.Tifrunner.gnm1.ann1.14AZRF Arachis hypogaea HOM05D002546 ORTHO05D002671 2.1e-06 57.0 107 29.9
Dinv22053 Davidia involucrata HOM05D002546 ORTHO05D002671 2.1e-06 57.0 113 28.3
CiPaw.04G008800 Carya illinoinensis HOM05D002546 ORTHO05D002671 2.8e-06 56.6 114 29.8
RcHm_v2.0_Chr6g0249571 Rosa chinensis HOM05D002546 ORTHO05D002671 2.8e-06 56.6 119 31.1
Psat5g233600 Pisum sativum HOM05D002546 ORTHO05D002671 3.6e-06 56.2 119 30.3
Eucgr.F04087 Eucalyptus grandis HOM05D002546 ORTHO05D002671 4.8e-06 55.8 115 29.6
TPR.G5120 Trifolium pratense HOM05D002546 ORTHO05D002671 6.2e-06 55.5 119 30.3
Ca_14148_v3 Cicer arietinum L. HOM05D002546 ORTHO05D002671 8.1e-06 55.1 114 29.8
Ca_29996_v3 Cicer arietinum L. HOM05D002546 ORTHO05D002671 8.1e-06 55.1 114 29.8


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