Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0004781 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 1.4e-187 659.4 330 100.0
CSS0040499 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 1.0e-182 643.3 343 95.0
Dinv35002 Davidia involucrata HOM05D006434 ORTHO05D008069 1.7e-148 529.6 333 82.0
Actinidia06053 Actinidia chinensis HOM05D006434 ORTHO05D008069 2.7e-138 495.7 324 80.2
Rhsim10G0029400 Rhododendron simsii HOM05D006434 ORTHO05D008069 3.5e-138 495.4 334 78.4
vmacro05779 Vaccinium macrocarpon HOM05D006434 ORTHO05D008069 7.8e-138 494.2 326 77.9
TAR629G3263 Trochodendron aralioides HOM05D006434 ORTHO05D008069 1.5e-133 479.9 332 75.3
GSVIVG01032566001 Vitis vinifera HOM05D006434 ORTHO05D008069 6.0e-130 468.0 333 74.8
CAN.G1128.11 Capsicum annuum HOM05D006434 ORTHO05D008069 3.6e-127 458.8 325 75.1
PGSC0003DMG400006900 Solanum tuberosum HOM05D006434 ORTHO05D008069 2.4e-126 456.1 325 74.2
Cfa007492 Carpinus fangiana HOM05D006434 ORTHO05D008069 6.8e-126 454.5 336 72.3
Nn1g08819 Nelumbo nucifera HOM05D006434 ORTHO05D008069 9.9e-125 450.7 326 71.2
Nitab4.5_0001727g0150 Nicotiana tabacum HOM05D006434 ORTHO05D008069 2.2e-124 449.5 325 73.8
Atru.chr8.2465 Acer truncatum HOM05D006434 ORTHO05D008069 3.8e-124 448.7 289 76.8
Solyc02g067540.3 Solanum lycopersicum HOM05D006434 ORTHO05D008069 1.4e-123 446.8 325 73.2
Sopen02g016670 Solanum pennellii HOM05D006434 ORTHO05D008069 1.4e-123 446.8 325 73.2
COL.COLO4_36989 Corchorus olitorius HOM05D006434 ORTHO05D008069 1.2e-122 443.7 326 70.9
Hma1.2p1_0136F.1_g062090 Hydrangea macrophylla HOM05D006434 ORTHO05D008069 1.2e-122 443.7 264 81.8
Ciclev10012231m.g Citrus clementina HOM05D006434 ORTHO05D008069 2.5e-120 436.0 317 71.0
Duzib264G0249 Durio zibethinus HOM05D006434 ORTHO05D008069 4.3e-120 435.3 337 68.5
TWI56G0494 Tripterygium wilfordii HOM05D006434 ORTHO05D008069 9.6e-120 434.1 324 71.3
CANSAT64G2331 Cannabis sativa HOM05D006434 ORTHO05D008069 1.3e-119 433.7 325 68.9
Eucgr.I01896 Eucalyptus grandis HOM05D006434 ORTHO05D008069 1.6e-119 433.3 280 76.1
CsaV3_5G037720 Cucumis sativus L. HOM05D006434 ORTHO05D008069 2.1e-119 433.0 323 70.0
Sed0011674 Sechium edule HOM05D006434 ORTHO05D008069 2.1e-119 433.0 326 69.3
Potri.001G349800 Populus trichocarpa HOM05D006434 ORTHO05D008069 8.1e-119 431.0 328 70.7
MELO3C021484.2 Cucumis melo HOM05D006434 ORTHO05D008069 1.4e-118 430.3 322 69.3
Thecc.04G069300 Theobroma cacao HOM05D006434 ORTHO05D008069 1.8e-118 429.9 337 67.7
PGR142G2438 Punica granatum HOM05D006434 ORTHO05D008069 2.4e-118 429.5 327 68.8
Gohir.A07G216800 Gossypium hirsutum HOM05D006434 ORTHO05D008069 1.5e-117 426.8 324 69.4
MD09G1042700 Malus domestica HOM05D006434 ORTHO05D008069 2.0e-117 426.4 335 67.8
Manes.15G178000 Manihot esculenta HOM05D006434 ORTHO05D008069 9.9e-117 424.1 328 68.9
Gorai.001G257900 Gossypium raimondii HOM05D006434 ORTHO05D008069 3.8e-116 422.2 326 69.0
Gohir.D07G223600 Gossypium hirsutum HOM05D006434 ORTHO05D008069 4.9e-116 421.8 326 69.0
Aqoxy3G00846 Aquilegia oxysepala HOM05D006434 ORTHO05D008069 2.4e-115 419.5 317 68.1
QL02p079411 Quercus lobata HOM05D006434 ORTHO05D008069 3.2e-115 419.1 321 69.5
Cc07_g02850 Coffea canephora HOM05D006434 ORTHO05D008069 4.2e-115 418.7 324 68.8
Peaxi162Scf00059g00128 Petunia axillaris HOM05D006434 ORTHO05D008069 1.2e-114 417.2 324 68.2
Oeu022866.3 Olea europaea HOM05D006434 ORTHO05D008069 2.1e-114 416.4 362 63.3
Sabra16G0229200 Salix brachista HOM05D006434 ORTHO05D008069 2.1e-114 416.4 327 69.4
Migut.H00876 Erythranthe guttata HOM05D006434 ORTHO05D008069 1.7e-113 413.3 301 73.1
Lj2g0012157 Lotus japonicus HOM05D006434 ORTHO05D008069 1.5e-112 410.2 333 67.9
RcHm_v2.0_Chr2g0169691 Rosa chinensis HOM05D006434 ORTHO05D008069 1.9e-112 409.8 327 66.4
AUR62018326 Chenopodium quinoa HOM05D006434 ORTHO05D008069 4.3e-112 408.7 322 67.7
Phvul.004G023900 Phaseolus vulgaris HOM05D006434 ORTHO05D008069 1.6e-111 406.8 324 69.4
FvH4_6g49670 Fragaria vesca HOM05D006434 ORTHO05D008069 2.8e-111 406.0 324 66.7
FAN14G5872 Fragaria x ananassa HOM05D006434 ORTHO05D008069 4.8e-111 405.2 323 67.2
PSO161G0076 Papaver somniferum HOM05D006434 ORTHO05D008069 8.1e-111 404.4 276 72.8
ATR0665G567 Amborella trichopoda HOM05D006434 ORTHO05D008069 2.4e-110 402.9 306 68.0
FAN02G4063 Fragaria x ananassa HOM05D006434 ORTHO05D008069 2.4e-110 402.9 331 65.0
CiPaw.03G032300 Carya illinoinensis HOM05D006434 ORTHO05D008069 3.1e-110 402.5 296 70.6
FAN05G1688 Fragaria x ananassa HOM05D006434 ORTHO05D008069 1.5e-109 400.2 324 66.4
arahy.Tifrunner.gnm1.ann1.ICRE53 Arachis hypogaea HOM05D006434 ORTHO05D008069 2.0e-109 399.8 321 68.5
Sc10g0004040 Simmondsia chinensis HOM05D006434 ORTHO05D008069 2.0e-109 399.8 255 77.3
arahy.Tifrunner.gnm1.ann1.X2C98S Arachis hypogaea HOM05D006434 ORTHO05D008069 2.6e-109 399.4 327 68.5
PSO478G2838 Papaver somniferum HOM05D006434 ORTHO05D008069 9.9e-109 397.5 326 64.1
MSTRG.23964 Avicennia marina HOM05D006434 ORTHO05D008069 2.9e-108 396.0 288 71.9
CSS0001127 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 1.4e-107 393.7 229 86.0
ECA232G4812 Erigeron canadensis HOM05D006434 ORTHO05D008069 1.4e-107 393.7 307 65.5
Medtr6g009400 Medicago truncatula HOM05D006434 ORTHO05D008069 1.4e-107 393.7 327 67.6
Lsat_1_v5_gn_4_180280 Lactuca sativa HOM05D006434 ORTHO05D008069 1.9e-107 393.3 289 71.3
TPR.G32608 Trifolium pratense HOM05D006434 ORTHO05D008069 2.4e-107 392.9 322 66.5
SGA_v2.0_scaffold205G41750 Striga asiatica HOM05D006434 ORTHO05D008069 1.2e-106 390.6 323 65.0
EL10Ac2g02902 Beta vulgaris HOM05D006434 ORTHO05D008069 6.0e-106 388.3 350 62.3
Glyma.13G066900 Glycine max HOM05D006434 ORTHO05D008069 6.0e-106 388.3 316 65.8
Lalb_Chr21g0319131 Lupinus albus HOM05D006434 ORTHO05D008069 3.0e-105 386.0 333 65.5
HanXRQChr15g0488521 Helianthus annuus HOM05D006434 ORTHO05D008069 5.1e-105 385.2 255 75.3
CSS0033350 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 1.5e-104 383.6 221 87.3
Carub.0005s0699 Capsella rubella HOM05D006434 ORTHO05D008069 2.5e-104 382.9 323 65.0
DCAR_006717 Daucus carota HOM05D006434 ORTHO05D008069 7.4e-104 381.3 232 81.0
ClCG09G018520 Citrullus lanatus HOM05D006434 ORTHO05D008069 1.6e-103 380.2 300 67.7
AL5G18090 Arabidopsis lyrata HOM05D006434 ORTHO05D008069 2.1e-103 379.8 317 64.4
AUR62030560 Chenopodium quinoa HOM05D006434 ORTHO05D008069 2.1e-103 379.8 334 62.3
VMungo0464G0451 Vigna mungo HOM05D006434 ORTHO05D008069 4.8e-103 378.6 326 64.7
Aa31LG2G4610 Aethionema arabicum HOM05D006434 ORTHO05D008069 5.8e-101 371.7 350 59.4
Sp2g17230 Schrenkiella parvula HOM05D006434 ORTHO05D008069 2.2e-100 369.8 276 69.6
CDE02G1577 Ceratophyllum demersum HOM05D006434 ORTHO05D008069 2.9e-100 369.4 300 62.7
Haze_14607 Corylus avellana HOM05D006434 ORTHO05D008069 3.2e-99 365.9 296 67.6
unitig_744.g24344 Utricularia gibba HOM05D006434 ORTHO05D008069 3.2e-99 365.9 260 72.3
Thhalv10004634m.g Eutrema salsugineum HOM05D006434 ORTHO05D008069 4.2e-99 365.5 319 64.6
THA.LOC104823923 Tarenaya hassleriana HOM05D006434 ORTHO05D008069 7.1e-99 364.8 325 61.2
BolC7t44265H Brassica oleracea HOM05D006434 ORTHO05D008069 1.2e-98 364.0 325 61.8
A06p40510 Brassica napus HOM05D006434 ORTHO05D008069 2.1e-98 363.2 319 63.0
BraA06t26970Z Brassica rapa HOM05D006434 ORTHO05D008069 2.1e-98 363.2 319 63.0
C07p37520 Brassica napus HOM05D006434 ORTHO05D008069 6.0e-98 361.7 325 61.5
CARHR292500 Cardamine hirsuta HOM05D006434 ORTHO05D008069 1.0e-97 360.9 313 62.3
BcaC06g33735 Brassica carinata HOM05D006434 ORTHO05D008069 2.3e-97 359.8 326 60.4
Psat1g076480 Pisum sativum HOM05D006434 ORTHO05D008069 3.9e-97 359.0 279 67.0
FAN09G0258 Fragaria x ananassa HOM05D006434 ORTHO05D008069 8.7e-97 357.8 304 62.8
Prupe.3G275100 Prunus persica HOM05D006434 ORTHO05D008069 1.4e-94 350.5 279 67.0
HPP92_023566 Vanilla planifolia HOM05D006434 ORTHO05D008069 5.8e-93 345.1 269 65.4
Os03g0736400 Oryza sativa ssp. japonica HOM05D006434 ORTHO05D008069 2.5e-91 339.7 297 61.3
Glyma.19G017500 Glycine max HOM05D006434 ORTHO05D008069 3.2e-91 339.3 197 82.7
Lj7A404T37 Lonicera japonica HOM05D006434 ORTHO05D008069 1.4e-83 313.9 239 70.7
Cpa.g.sc14.62 Carica papaya HOM05D006434 ORTHO05D008069 1.6e-82 310.5 174 86.2
CSS0043817 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 4.6e-82 308.9 185 83.2
SalBow1G5247 Salvia bowleyana HOM05D006434 ORTHO05D008069 4.6e-82 308.9 294 57.1
Nitab4.5_0003431g0070 Nicotiana tabacum HOM05D006434 ORTHO05D008069 2.3e-81 306.6 176 83.0
AT3G28460 Arabidopsis thaliana HOM05D006434 ORTHO05D008069 9.7e-80 301.2 274 61.7
Ca_04243_v3 Cicer arietinum L. HOM05D006434 ORTHO05D008069 1.2e-77 294.3 225 66.2
Zm00001eb215320 Zea mays HOM05D006434 ORTHO05D008069 2.9e-76 289.7 262 59.2
Pp3c7_630 Physcomitrium patens HOM05D006434 ORTHO05D008069 1.4e-65 254.2 234 55.6
AagrBONN_evm.TU.Sc2ySwM_344.3988 Anthoceros agrestis HOM05D006434 ORTHO05D008069 1.5e-64 250.8 196 62.8
SMO171G0075 Selaginella moellendorffii HOM05D006434 ORTHO05D008069 9.7e-64 248.1 200 60.5
MBI01_g13068_MAGBIO Magnolia biondii HOM05D006434 ORTHO05D008069 8.2e-63 245.0 217 62.2
Hund13291 Selenicereus undatus HOM05D006434 ORTHO05D008069 2.9e-60 236.5 247 57.5
Mapoly0140s0031 Marchantia polymorpha HOM05D006434 ORTHO05D008069 1.0e-57 228.0 208 54.8
CBR_g31858 Chara braunii HOM05D006434 ORTHO05D008069 1.3e-47 194.5 234 47.0
SEGI_25544 Sequoiadendron giganteum HOM05D006434 ORTHO05D008069 9.5e-43 178.3 245 46.5
PRCOL_00006620 Prasinoderma coloniale HOM05D006434 ORTHO05D008069 5.7e-40 169.1 208 42.3
Cre13.g566300 Chlamydomonas reinhardtii HOM05D006434 ORTHO05D008069 7.5e-40 168.7 201 42.8
SEGI_38692 Sequoiadendron giganteum HOM05D006434 ORTHO05D008069 2.4e-38 163.7 125 63.2
MBI01_g13070_MAGBIO Magnolia biondii HOM05D006434 ORTHO05D008069 4.0e-33 146.4 91 75.8
Solyc01g057060.1 Solanum lycopersicum HOM05D006434 ORTHO05D008069 4.9e-31 139.4 98 70.4
MCO03G139 Micromonas commoda HOM05D006434 ORTHO05D008069 5.4e-30 136.0 120 52.5
Sopen01g021310 Solanum pennellii HOM05D006434 ORTHO05D008069 2.7e-29 133.7 86 76.7
TAR371G0222 Trochodendron aralioides HOM05D006434 ORTHO05D008069 4.3e-27 126.3 196 44.9
MD17G1044100 Malus domestica HOM05D006434 ORTHO05D008069 2.6e-24 117.1 60 93.3
Lj7A404T38 Lonicera japonica HOM05D006434 ORTHO05D008069 2.3e-12 77.4 147 36.7
Cpa.g.sc14.61 Carica papaya HOM05D006434 ORTHO05D008069 2.1e-10 70.9 126 45.2
Lsat_1_v5_gn_7_34121 Lactuca sativa HOM05D006434 ORTHO05D008069 5.2e-09 66.2 37 81.1
Actinidia36050 Actinidia chinensis HOM05D006434 ORTHO05D053052 9.3e-06 55.5 26 88.5


User provided reference genes

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