Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0003771 Camellia sinensis var. sinensis HOM05D007471 ORTHO05D009481 2.4e-90 335.5 168 100.0
CSS0004770 Camellia sinensis var. sinensis HOM05D007471 ORTHO05D009481 2.4e-90 335.5 168 100.0
Actinidia12353 Actinidia chinensis HOM05D007471 ORTHO05D009481 2.1e-67 259.2 168 76.2
Rhsim06G0179200 Rhododendron simsii HOM05D000358 ORTHO05D001562 3.8e-64 248.4 168 75.0
Dinv05327 Davidia involucrata HOM05D007471 ORTHO05D009481 3.7e-59 231.9 168 69.0
QL04p066931 Quercus lobata HOM05D007471 ORTHO05D009481 2.4e-58 229.2 168 63.7
Hma1.2p1_0599F.1_g186930 Hydrangea macrophylla HOM05D007471 ORTHO05D009481 9.0e-58 227.3 168 67.9
Lj8A138T38 Lonicera japonica HOM05D007471 ORTHO05D009481 1.9e-55 219.5 168 64.3
Haze_12583 Corylus avellana HOM05D007471 ORTHO05D009481 1.8e-53 213.0 171 62.0
Cfa014199 Carpinus fangiana HOM05D005171 ORTHO05D006343 1.1e-52 210.3 169 60.9
GSVIVG01030129001 Vitis vinifera HOM05D007471 ORTHO05D009481 1.1e-52 210.3 168 62.5
TAR626G0037 Trochodendron aralioides HOM05D007471 ORTHO05D009481 2.5e-52 209.1 169 58.6
MD17G1122600 Malus domestica HOM05D007471 ORTHO05D009481 1.7e-51 206.5 169 60.9
Prupe.3G192700 Prunus persica HOM05D007471 ORTHO05D009481 2.2e-51 206.1 169 59.8
Manes.12G067200 Manihot esculenta HOM05D007471 ORTHO05D009481 2.4e-50 202.6 169 57.4
Nn1g07565 Nelumbo nucifera HOM05D007471 ORTHO05D009481 9.1e-50 200.7 169 57.4
RcHm_v2.0_Chr2g0155251 Rosa chinensis HOM05D007471 ORTHO05D009481 9.1e-50 200.7 169 59.8
Cpa.g.sc136.59 Carica papaya HOM05D007471 ORTHO05D009481 2.6e-49 199.1 168 58.9
MD17G1121200 Malus domestica HOM05D007471 ORTHO05D009481 2.6e-49 199.1 169 59.2
FAN05G3962 Fragaria x ananassa HOM05D007471 ORTHO05D009481 5.9e-49 198.0 169 59.8
Ciclev10016450m.g Citrus clementina HOM05D007471 ORTHO05D009481 1.3e-48 196.8 169 58.6
TWI36G0936 Tripterygium wilfordii HOM05D007471 ORTHO05D009481 5.0e-48 194.9 168 56.5
Sc21g0000400 Simmondsia chinensis HOM05D007471 ORTHO05D009481 8.5e-48 194.1 169 58.6
FvH4_6g40230 Fragaria vesca HOM05D007471 ORTHO05D009481 1.9e-47 193.0 169 58.0
FAN14G4986 Fragaria x ananassa HOM05D007471 ORTHO05D009481 1.9e-47 193.0 169 58.0
Eucgr.K01386 Eucalyptus grandis HOM05D007471 ORTHO05D009481 2.5e-47 192.6 170 55.3
FAN09G1454 Fragaria x ananassa HOM05D007471 ORTHO05D009481 7.2e-47 191.0 169 57.4
Lsat_1_v5_gn_9_102921 Lactuca sativa HOM05D007471 ORTHO05D009481 1.2e-46 190.3 169 58.0
Peaxi162Scf00359g00320 Petunia axillaris HOM05D007471 ORTHO05D009481 2.1e-46 189.5 168 53.0
vmacro12060 Vaccinium macrocarpon HOM05D007471 ORTHO05D009481 1.0e-45 187.2 128 73.4
HanXRQChr09g0257421 Helianthus annuus HOM05D007471 ORTHO05D009481 3.0e-45 185.7 169 53.8
ECA240G3131 Erigeron canadensis HOM05D001349 ORTHO05D001980 3.9e-45 185.3 169 54.4
PGSC0003DMG402017414 Solanum tuberosum HOM05D007471 ORTHO05D009481 5.1e-45 184.9 168 51.2
Solyc07g045150.3 Solanum lycopersicum HOM05D007471 ORTHO05D009481 1.1e-44 183.7 168 52.4
Sopen07g023700 Solanum pennellii HOM05D007471 ORTHO05D009481 2.0e-44 183.0 168 52.4
Nitab4.5_0003086g0070 Nicotiana tabacum HOM05D007471 ORTHO05D009481 3.3e-44 182.2 168 51.8
Cc05_g01930 Coffea canephora HOM05D007471 ORTHO05D009481 1.3e-43 180.3 168 51.8
Lalb_Chr10g0094201 Lupinus albus HOM05D007471 ORTHO05D009481 5.3e-42 174.9 170 54.1
PSO210G0038 Papaver somniferum HOM05D007471 ORTHO05D009481 9.1e-42 174.1 169 51.5
CAN.G826.3 Capsicum annuum HOM05D007471 ORTHO05D009481 1.2e-41 173.7 168 50.6
MBI14_g27042_MAGBIO Magnolia biondii HOM05D007471 ORTHO05D009481 2.0e-41 172.9 169 53.3
CsaV3_7G002330 Cucumis sativus L. HOM05D007471 ORTHO05D009481 3.5e-41 172.2 173 49.7
MELO3C024177.2 Cucumis melo HOM05D007471 ORTHO05D009481 4.5e-41 171.8 173 49.7
MSTRG.6626 Avicennia marina HOM05D007471 ORTHO05D009481 5.9e-41 171.4 168 51.8
SalBow7G1274 Salvia bowleyana HOM05D007471 ORTHO05D009481 5.9e-41 171.4 168 49.4
Sed0023252 Sechium edule HOM05D007471 ORTHO05D009481 1.3e-40 170.2 170 49.4
PGR044G0015 Punica granatum HOM05D007471 ORTHO05D009481 3.8e-40 168.7 168 47.0
Sp3g06580 Schrenkiella parvula HOM05D007471 ORTHO05D009481 5.0e-40 168.3 169 50.3
Lj6g0025127 Lotus japonicus HOM05D007471 ORTHO05D009481 6.5e-40 167.9 170 51.2
BolC3t16568H Brassica oleracea HOM05D007471 ORTHO05D009481 1.5e-39 166.8 169 51.5
Psat1g019920 Pisum sativum HOM05D007471 ORTHO05D009481 1.9e-39 166.4 171 50.9
A03p35390 Brassica napus HOM05D007471 ORTHO05D009481 2.5e-39 166.0 169 50.9
BraA03t12717Z Brassica rapa HOM05D007471 ORTHO05D009481 2.5e-39 166.0 169 50.9
Glyma.09G086000 Glycine max HOM05D007471 ORTHO05D009481 2.5e-39 166.0 170 48.8
Duzib133G1025 Durio zibethinus HOM05D007471 ORTHO05D009481 3.2e-39 165.6 174 51.7
TPR.G20279 Trifolium pratense HOM05D007471 ORTHO05D009481 3.2e-39 165.6 169 49.7
AL3G19000 Arabidopsis lyrata HOM05D007471 ORTHO05D009481 4.2e-39 165.2 169 49.1
BcaC01g04271 Brassica carinata HOM05D007471 ORTHO05D009481 4.2e-39 165.2 169 50.9
C03p43000 Brassica napus HOM05D007471 ORTHO05D009481 4.2e-39 165.2 169 50.9
BcaB03g14686 Brassica carinata HOM05D007471 ORTHO05D009481 7.2e-39 164.5 169 49.7
BcaB03g14688 Brassica carinata HOM05D007471 ORTHO05D009481 7.2e-39 164.5 169 49.7
CARHR082340 Cardamine hirsuta HOM05D007471 ORTHO05D009481 1.2e-38 163.7 169 49.1
ClCG02G003070 Citrullus lanatus HOM05D007471 ORTHO05D009481 1.2e-38 163.7 174 46.0
PSO210G4841 Papaver somniferum HOM05D007471 ORTHO05D009481 1.2e-38 163.7 171 48.5
THA.LOC104819026 Tarenaya hassleriana HOM05D007471 ORTHO05D009481 1.2e-38 163.7 171 50.9
Thhalv10021420m.g Eutrema salsugineum HOM05D007471 ORTHO05D009481 4.7e-38 161.8 169 49.7
Glyma.15G195100 Glycine max HOM05D007471 ORTHO05D009481 4.7e-38 161.8 170 48.2
AT3G07640 Arabidopsis thaliana HOM05D007471 ORTHO05D009481 8.0e-38 161.0 169 48.5
Carub.0003s0722 Capsella rubella HOM05D007471 ORTHO05D009481 8.0e-38 161.0 170 50.0
COL.COLO4_19658 Corchorus olitorius HOM05D007471 ORTHO05D009481 8.0e-38 161.0 172 47.7
Migut.M00062 Erythranthe guttata HOM05D007471 ORTHO05D009481 8.0e-38 161.0 168 48.2
Thecc.01G199800 Theobroma cacao HOM05D007471 ORTHO05D009481 8.0e-38 161.0 174 50.0
Medtr2g049140 Medicago truncatula HOM05D007471 ORTHO05D009481 1.8e-37 159.8 170 50.0
Aa31LG5G18220 Aethionema arabicum HOM05D007471 ORTHO05D009481 3.0e-37 159.1 169 50.3
Gohir.A07G193500 Gossypium hirsutum HOM05D007471 ORTHO05D009481 2.0e-36 156.4 176 47.2
Ca_02565_v3 Cicer arietinum L. HOM05D007471 ORTHO05D009481 4.4e-36 155.2 170 49.4
VMungo1309G3041 Vigna mungo HOM05D007471 ORTHO05D009481 7.5e-36 154.5 169 47.3
Gorai.001G223900 Gossypium raimondii HOM05D007471 ORTHO05D009481 9.7e-36 154.1 176 46.6
Gohir.D07G199700 Gossypium hirsutum HOM05D007471 ORTHO05D009481 2.8e-35 152.5 176 46.0
TPR.G28406 Trifolium pratense HOM05D007471 ORTHO05D009481 2.4e-34 149.4 197 44.2
SHI10184 Sapria himalayana HOM05D007471 ORTHO05D009481 7.0e-34 147.9 151 45.7
Phvul.009G214800 Phaseolus vulgaris HOM05D007471 ORTHO05D009481 7.7e-33 144.4 169 44.4
SGA_v2.0_scaffold73G24486 Striga asiatica HOM05D007471 ORTHO05D009481 1.3e-32 143.7 154 46.1
Atru.BG.43.p Acer truncatum HOM05D007471 ORTHO05D009481 2.2e-32 142.9 110 65.5
AUR62018237 Chenopodium quinoa HOM05D007471 ORTHO05D009481 3.8e-32 142.1 169 46.2
AUR62037766 Chenopodium quinoa HOM05D007471 ORTHO05D009481 3.2e-31 139.0 169 43.8
Oeu000672.1 Olea europaea HOM05D007471 ORTHO05D009481 3.2e-31 139.0 126 50.8
DCAR_019662 Daucus carota HOM05D007471 ORTHO05D009481 1.7e-27 126.7 131 45.0
ATR0751G158 Amborella trichopoda HOM05D007471 ORTHO05D009481 3.7e-27 125.6 170 43.5
THA.LOC104822442 Tarenaya hassleriana HOM05D007471 ORTHO05D009481 6.3e-27 124.8 172 43.6
Os02g0582400 Oryza sativa ssp. japonica HOM05D007471 ORTHO05D009481 5.9e-25 118.2 166 34.9
Zm00001eb245410 Zea mays HOM05D007471 ORTHO05D009481 1.3e-24 117.1 168 35.7
CDE11G0370 Ceratophyllum demersum HOM05D007471 ORTHO05D009481 1.9e-23 113.2 172 39.5
Phvul.009G215100 Phaseolus vulgaris HOM05D007471 ORTHO05D009481 9.4e-23 110.9 169 37.3
MBI14_g39587_MAGBIO Magnolia biondii HOM05D007471 ORTHO05D009481 1.8e-21 106.7 143 40.6
FAN02G2672 Fragaria x ananassa HOM05D007471 ORTHO05D009481 8.3e-19 97.8 169 35.5
SEGI_00651 Sequoiadendron giganteum HOM05D007471 ORTHO05D009481 1.4e-13 80.5 177 29.9
Lsat_1_v5_gn_3_93600 Lactuca sativa HOM05D007471 ORTHO05D233800 1.2e-06 57.4 63 47.6
Peaxi162Scf00289g00039 Petunia axillaris HOM05D007471 ORTHO05D009481 1.6e-06 57.0 57 42.1
MBI14_g37361_MAGBIO Magnolia biondii HOM05D007471 ORTHO05D009481 6.2e-06 55.1 44 52.3


User provided reference genes

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