Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0004760 Camellia sinensis var. sinensis HOM05D007377 ORTHO05D001318 3.6e-45 184.5 91 100.0
CSS0037913 Camellia sinensis var. sinensis HOM05D007377 ORTHO05D001318 4.2e-33 144.4 101 79.2
CSS0047330 Camellia sinensis var. sinensis HOM05D007377 ORTHO05D001318 4.2e-33 144.4 101 79.2
Lj6g0015280 Lotus japonicus HOM05D007377 ORTHO05D001318 2.3e-31 138.7 102 74.5
Dinv22236 Davidia involucrata HOM05D000967 ORTHO05D000796 3.0e-31 138.3 101 74.3
Glyma.08G321900 Glycine max HOM05D007377 ORTHO05D001318 3.9e-31 137.9 102 74.5
Glyma.18G090500 Glycine max HOM05D007377 ORTHO05D001318 3.9e-31 137.9 101 74.3
TWI38G0075 Tripterygium wilfordii HOM05D007377 ORTHO05D001318 5.1e-31 137.5 101 75.2
FvH4_3g23500 Fragaria vesca HOM05D007377 ORTHO05D001318 8.7e-31 136.7 101 74.3
Lalb_Chr15g0081741 Lupinus albus HOM05D007377 ORTHO05D001318 1.1e-30 136.3 101 75.2
Thecc.07G028800 Theobroma cacao HOM05D007377 ORTHO05D001318 1.1e-30 136.3 101 73.3
vmacro22317 Vaccinium macrocarpon HOM05D007377 ORTHO05D001318 1.1e-30 136.3 101 73.3
RcHm_v2.0_Chr5g0041331 Rosa chinensis HOM05D007377 ORTHO05D001318 2.5e-30 135.2 101 73.3
CiPaw.12G133300 Carya illinoinensis HOM05D007377 ORTHO05D001318 3.3e-30 134.8 101 74.3
FAN25G2631 Fragaria x ananassa HOM05D007377 ORTHO05D001318 3.3e-30 134.8 101 73.3
FAN25G3507 Fragaria x ananassa HOM05D007377 ORTHO05D001318 3.3e-30 134.8 101 73.3
COL.COLO4_09723 Corchorus olitorius HOM05D007377 ORTHO05D001318 4.3e-30 134.4 101 73.3
Manes.03G136902 Manihot esculenta HOM05D007377 ORTHO05D001318 7.4e-30 133.7 101 71.3
arahy.Tifrunner.gnm1.ann1.A282I6 Arachis hypogaea HOM05D007377 ORTHO05D001318 9.6e-30 133.3 101 71.3
Lalb_Chr15g0081671 Lupinus albus HOM05D007377 ORTHO05D001318 9.6e-30 133.3 101 73.3
arahy.Tifrunner.gnm1.ann1.T57YAK Arachis hypogaea HOM05D007377 ORTHO05D001318 1.3e-29 132.9 101 70.3
MD03G1193900 Malus domestica HOM05D007377 ORTHO05D001318 1.3e-29 132.9 101 73.3
Nitab4.5_0000984g0030 Nicotiana tabacum HOM05D007377 ORTHO05D001318 1.6e-29 132.5 101 71.3
Nitab4.5_0002826g0030 Nicotiana tabacum HOM05D007377 ORTHO05D001318 1.6e-29 132.5 101 71.3
Psat5g226320 Pisum sativum HOM05D007377 ORTHO05D001318 1.6e-29 132.5 101 70.3
Potri.015G137600 Populus trichocarpa HOM05D007377 ORTHO05D001318 1.6e-29 132.5 100 72.0
TPR.G32227 Trifolium pratense HOM05D007377 ORTHO05D001318 1.6e-29 132.5 101 71.3
FAN11G2811 Fragaria x ananassa HOM05D007377 ORTHO05D001318 2.1e-29 132.1 101 72.3
FAN21G0570 Fragaria x ananassa HOM05D007377 ORTHO05D001318 2.1e-29 132.1 101 72.3
PGSC0003DMG400022302 Solanum tuberosum HOM05D007377 ORTHO05D001318 2.1e-29 132.1 101 70.3
Nn6g34450 Nelumbo nucifera HOM05D007377 ORTHO05D001318 2.8e-29 131.7 101 72.3
Prupe.4G222800 Prunus persica HOM05D007377 ORTHO05D001318 2.8e-29 131.7 101 72.3
Sopen07g033120 Solanum pennellii HOM05D007377 ORTHO05D001318 2.8e-29 131.7 101 69.3
CARHR234430 Cardamine hirsuta HOM05D007377 ORTHO05D001318 3.7e-29 131.3 101 72.3
QL08p007408 Quercus lobata HOM05D007377 ORTHO05D001318 3.7e-29 131.3 100 72.0
Duzib170G0659 Durio zibethinus HOM05D007377 ORTHO05D001318 4.8e-29 131.0 101 71.3
Phvul.006G048200 Phaseolus vulgaris HOM05D007377 ORTHO05D001318 4.8e-29 131.0 102 70.6
PGR083G0521 Punica granatum HOM05D007377 ORTHO05D001318 4.8e-29 131.0 101 68.3
Ca_14764_v3 Cicer arietinum L. HOM05D001939 ORTHO05D002051 6.2e-29 130.6 101 68.3
Solyc07g064920.3 Solanum lycopersicum HOM05D007377 ORTHO05D001318 6.2e-29 130.6 101 68.3
Eucgr.F00655 Eucalyptus grandis HOM05D007377 ORTHO05D001318 8.2e-29 130.2 101 69.3
Thhalv10026656m.g Eutrema salsugineum HOM05D007377 ORTHO05D001318 8.2e-29 130.2 101 70.3
Aa31LG5G12120 Aethionema arabicum HOM05D007377 ORTHO05D001318 1.1e-28 129.8 101 71.3
TWI38G0751 Tripterygium wilfordii HOM05D007377 ORTHO05D001318 1.4e-28 129.4 101 70.3
Gohir.D13G141100 Gossypium hirsutum HOM05D007377 ORTHO05D001318 1.8e-28 129.0 101 70.3
Gorai.013G157900 Gossypium raimondii HOM05D007377 ORTHO05D001318 1.8e-28 129.0 101 70.3
GSVIVG01037716001 Vitis vinifera HOM05D007377 ORTHO05D001318 2.4e-28 128.6 101 70.3
AL7G26030 Arabidopsis lyrata HOM05D007377 ORTHO05D001318 3.1e-28 128.3 101 71.3
Carub.0007s1403 Capsella rubella HOM05D007377 ORTHO05D001318 3.1e-28 128.3 101 69.3
Rhsim06G0222900 Rhododendron simsii HOM05D007377 ORTHO05D001318 3.1e-28 128.3 101 71.3
Cpa.g.sc284.9 Carica papaya HOM05D007377 ORTHO05D001318 4.0e-28 127.9 101 68.3
Eucgr.F00653 Eucalyptus grandis HOM05D007377 ORTHO05D001318 5.3e-28 127.5 101 67.3
PSO210G4797 Papaver somniferum HOM05D007377 ORTHO05D001318 5.3e-28 127.5 101 67.3
Peaxi162Scf00235g00615 Petunia axillaris HOM05D007377 ORTHO05D001318 9.0e-28 126.7 92 73.9
CDE02G1939 Ceratophyllum demersum HOM05D007377 ORTHO05D001318 1.2e-27 126.3 100 67.0
TAR626G1964 Trochodendron aralioides HOM05D007377 ORTHO05D001318 1.5e-27 125.9 101 70.3
CAN.G337.62 Capsicum annuum HOM05D007377 ORTHO05D001318 2.6e-27 125.2 101 67.3
ClCG04G002280 Citrullus lanatus HOM05D007377 ORTHO05D001318 2.6e-27 125.2 102 67.6
AT4G26810 Arabidopsis thaliana HOM05D007377 ORTHO05D001318 3.4e-27 124.8 100 69.0
DCAR_030723 Daucus carota HOM05D007377 ORTHO05D001318 3.4e-27 124.8 101 66.3
CANSAT56G2083 Cannabis sativa HOM05D007377 ORTHO05D001318 5.8e-27 124.0 101 66.3
Cc05_g14250 Coffea canephora HOM05D007377 ORTHO05D001318 5.8e-27 124.0 101 67.3
Sc26g0002620 Simmondsia chinensis HOM05D007377 ORTHO05D001318 7.6e-27 123.6 101 66.3
Ciclev10010012m.g Citrus clementina HOM05D007377 ORTHO05D001318 1.3e-26 122.9 101 66.3
Aqoxy1G04156 Aquilegia oxysepala HOM05D007377 ORTHO05D001318 1.7e-26 122.5 101 67.3
CsaV3_4G030840 Cucumis sativus L. HOM05D007377 ORTHO05D001318 2.2e-26 122.1 102 67.6
MELO3C014274.2 Cucumis melo HOM05D007377 ORTHO05D001318 3.8e-26 121.3 102 67.6
ECA240G1072 Erigeron canadensis HOM05D007377 ORTHO05D001318 3.8e-26 121.3 101 65.3
A01p18050 Brassica napus HOM05D007377 ORTHO05D001318 8.4e-26 120.2 100 66.0
BraA01t01760Z Brassica rapa HOM05D007377 ORTHO05D001318 8.4e-26 120.2 100 66.0
Sp7g24790 Schrenkiella parvula HOM05D007377 ORTHO05D001318 8.4e-26 120.2 100 66.0
Hund23200 Selenicereus undatus HOM05D007377 ORTHO05D001318 8.4e-26 120.2 101 64.4
Lsat_1_v5_gn_9_93280 Lactuca sativa HOM05D007377 ORTHO05D001318 1.1e-25 119.8 97 69.1
THA.LOC104817679 Tarenaya hassleriana HOM05D007377 ORTHO05D001318 1.4e-25 119.4 101 65.3
C01p23010 Brassica napus HOM05D007377 ORTHO05D001318 1.9e-25 119.0 100 65.0
BolC1t02235H Brassica oleracea HOM05D007377 ORTHO05D001318 1.9e-25 119.0 100 65.0
Oeu013118.1 Olea europaea HOM05D007377 ORTHO05D001318 1.9e-25 119.0 101 66.3
BcaB03g12510 Brassica carinata HOM05D007377 ORTHO05D001318 2.5e-25 118.6 97 66.0
EL10Ac4g07701 Beta vulgaris HOM05D007377 ORTHO05D001318 3.2e-25 118.2 101 63.4
A08p20700 Brassica napus HOM05D007377 ORTHO05D001318 5.5e-25 117.5 99 64.6
BraA08t34024Z Brassica rapa HOM05D007377 ORTHO05D001318 5.5e-25 117.5 99 64.6
HanXRQChr03g0076811 Helianthus annuus HOM05D007377 ORTHO05D001318 5.5e-25 117.5 96 69.8
BcaC07g38252 Brassica carinata HOM05D007377 ORTHO05D001318 7.1e-25 117.1 99 64.6
C08p09980 Brassica napus HOM05D007377 ORTHO05D001318 7.1e-25 117.1 99 64.6
BolC8t48675H Brassica oleracea HOM05D007377 ORTHO05D001318 7.1e-25 117.1 99 64.6
SGA_v2.0_scaffold19G08742 Striga asiatica HOM05D007377 ORTHO05D001318 9.3e-25 116.7 101 60.4
SGA_v2.0_scaffold79G25647 Striga asiatica HOM05D007377 ORTHO05D001318 9.3e-25 116.7 101 60.4
Migut.M01714 Erythranthe guttata HOM05D007377 ORTHO05D001318 7.9e-24 113.6 101 59.4
SalBow2G0902 Salvia bowleyana HOM05D007377 ORTHO05D001318 3.0e-23 111.7 101 59.4
MBI19_g29450_MAGBIO Magnolia biondii HOM05D007377 ORTHO05D001318 3.9e-23 111.3 92 64.1
Sed0005824 Sechium edule HOM05D007377 ORTHO05D001318 5.1e-23 110.9 101 62.4
MSTRG.6957 Avicennia marina HOM05D007377 ORTHO05D001318 6.7e-23 110.5 101 59.4
SHI26574 Sapria himalayana HOM05D007377 ORTHO05D001318 1.9e-22 109.0 101 61.4
Sabra15G0149000 Salix brachista HOM05D007377 ORTHO05D001318 3.3e-22 108.2 87 67.8
Actinidia32281 Actinidia chinensis HOM05D003038 ORTHO05D001318 2.9e-18 95.1 77 68.8
CSS0024685 Camellia sinensis var. sinensis HOM05D007377 ORTHO05D001318 1.9e-17 92.4 91 59.3
Os09g0133000 Oryza sativa ssp. japonica HOM05D007377 ORTHO05D001318 4.2e-17 91.3 101 48.5
CSS0047353 Camellia sinensis var. sinensis HOM05D007377 ORTHO05D001318 2.1e-16 89.0 82 63.4
CDE11G1083 Ceratophyllum demersum HOM05D007377 ORTHO05D001318 4.8e-13 77.8 70 60.0
Medtr3g054150 Medicago truncatula HOM05D007377 ORTHO05D001318 5.3e-12 74.3 40 87.5
Medtr3g054160 Medicago truncatula HOM05D007377 ORTHO05D001318 6.9e-12 73.9 42 83.3
Cfa020282 Carpinus fangiana HOM05D053328 ORTHO05D001318 5.9e-11 70.9 42 81.0
Gohir.A13G136700 Gossypium hirsutum HOM05D007377 ORTHO05D001318 1.0e-10 70.1 40 82.5
HPP92_004747 Vanilla planifolia HOM05D007377 ORTHO05D001318 2.0e-06 55.8 51 60.8
HPP92_004752 Vanilla planifolia HOM05D007377 ORTHO05D001318 2.0e-06 55.8 51 60.8


User provided reference genes

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