Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0004752 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 4.0e-218 761.1 389 100.0
Actinidia06849 Actinidia chinensis HOM05D006726 ORTHO05D008328 3.0e-149 532.3 365 73.4
vmacro04222 Vaccinium macrocarpon HOM05D006726 ORTHO05D008328 2.8e-147 525.8 365 74.0
Rhsim13G0230700 Rhododendron simsii HOM05D006726 ORTHO05D008328 5.2e-141 505.0 365 72.1
Dinv13438 Davidia involucrata HOM05D006726 ORTHO05D008328 2.6e-140 502.7 361 73.7
CSS0003958 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 2.7e-129 466.1 241 99.6
CSS0031538 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 2.7e-129 466.1 241 99.6
CiPaw.13G175000 Carya illinoinensis HOM05D006726 ORTHO05D008328 5.8e-116 421.8 366 60.9
GSVIVG01025422001 Vitis vinifera HOM05D006726 ORTHO05D008328 4.9e-115 418.7 365 61.6
MD03G1007100 Malus domestica HOM05D006726 ORTHO05D008328 1.1e-111 407.5 369 59.1
Prupe.6G006700 Prunus persica HOM05D006726 ORTHO05D008328 1.1e-111 407.5 366 60.4
Haze_22974 Corylus avellana HOM05D006726 ORTHO05D008328 1.9e-111 406.8 366 59.0
QL01p008136 Quercus lobata HOM05D006726 ORTHO05D008328 8.1e-110 401.4 363 60.3
ECA233G4338 Erigeron canadensis HOM05D006726 ORTHO05D008328 1.1e-109 401.0 365 58.1
TAR636G2476 Trochodendron aralioides HOM05D006726 ORTHO05D008328 1.5e-108 397.1 366 58.7
RcHm_v2.0_Chr5g0082841 Rosa chinensis HOM05D006726 ORTHO05D008328 3.4e-108 396.0 362 60.8
Lj2C718T3 Lonicera japonica HOM05D006726 ORTHO05D008328 1.3e-107 394.0 338 61.8
Potri.003G218100 Populus trichocarpa HOM05D006726 ORTHO05D008328 8.4e-107 391.3 366 59.8
Cc01_g02530 Coffea canephora HOM05D006726 ORTHO05D008328 1.4e-106 390.6 365 55.9
Atru.chr3.2327 Acer truncatum HOM05D006726 ORTHO05D008328 1.9e-106 390.2 362 59.4
Actinidia16259 Actinidia chinensis HOM05D006726 ORTHO05D008328 7.1e-106 388.3 317 67.2
FAN21G0710 Fragaria x ananassa HOM05D006726 ORTHO05D008328 3.5e-105 386.0 363 59.8
Sabra03G0162700 Salix brachista HOM05D006726 ORTHO05D008328 3.5e-105 386.0 366 60.9
FvH4_3g45230 Fragaria vesca HOM05D006726 ORTHO05D008328 6.0e-105 385.2 365 60.3
FAN25G0869 Fragaria x ananassa HOM05D006726 ORTHO05D008328 1.0e-104 384.4 363 59.2
MSTRG.18868 Avicennia marina HOM05D006726 ORTHO05D008328 1.3e-104 384.0 363 55.4
COL.COLO4_35015 Corchorus olitorius HOM05D006726 ORTHO05D008328 1.3e-104 384.0 367 55.9
Gohir.A08G011400 Gossypium hirsutum HOM05D006726 ORTHO05D008328 1.7e-104 383.6 365 55.6
FAN16G2093 Fragaria x ananassa HOM05D006726 ORTHO05D008328 3.9e-104 382.5 364 59.1
CANSAT11G1445 Cannabis sativa HOM05D006726 ORTHO05D008328 6.6e-104 381.7 365 57.5
Ciclev10015417m.g Citrus clementina HOM05D006726 ORTHO05D008328 1.9e-103 380.2 369 56.4
TWI34G0208 Tripterygium wilfordii HOM05D006726 ORTHO05D008328 2.8e-102 376.3 366 55.5
TWI34G0698 Tripterygium wilfordii HOM05D006726 ORTHO05D008328 2.8e-102 376.3 366 55.5
FAN11G1313 Fragaria x ananassa HOM05D006726 ORTHO05D008328 3.6e-102 375.9 365 59.5
Duzib170G1137 Durio zibethinus HOM05D006726 ORTHO05D008328 6.2e-102 375.2 366 55.5
Gohir.D08G021900 Gossypium hirsutum HOM05D006726 ORTHO05D008328 6.2e-102 375.2 365 55.3
Manes.03G084600 Manihot esculenta HOM05D006726 ORTHO05D008328 1.1e-101 374.4 369 56.9
VMungo0251G2876 Vigna mungo HOM05D006726 ORTHO05D008328 2.4e-101 373.2 360 54.4
Gorai.004G017200 Gossypium raimondii HOM05D006726 ORTHO05D008328 1.2e-100 370.9 365 55.1
Phvul.002G235500 Phaseolus vulgaris HOM05D006726 ORTHO05D008328 1.5e-100 370.5 359 54.3
Lj4g0004177 Lotus japonicus HOM05D006726 ORTHO05D008328 1.7e-99 367.1 361 53.5
Glyma.08G113300 Glycine max HOM05D006726 ORTHO05D008328 3.8e-99 365.9 360 54.7
DCAR_026158 Daucus carota HOM05D006726 ORTHO05D008328 6.4e-99 365.2 355 55.5
Glyma.05G155400 Glycine max HOM05D006726 ORTHO05D008328 1.4e-98 364.0 360 55.0
TPR.G24412 Trifolium pratense HOM05D006726 ORTHO05D008328 5.4e-98 362.1 363 55.4
EL10Ac4g10360 Beta vulgaris HOM05D006726 ORTHO05D008328 7.1e-98 361.7 365 52.6
HanXRQChr13g0405181 Helianthus annuus HOM05D006726 ORTHO05D008328 1.6e-97 360.5 363 53.2
arahy.Tifrunner.gnm1.ann1.GT4ACT Arachis hypogaea HOM05D006726 ORTHO05D008328 4.6e-97 359.0 361 52.6
Migut.D02543 Erythranthe guttata HOM05D006726 ORTHO05D008328 4.6e-97 359.0 364 53.3
MELO3C015045.2 Cucumis melo HOM05D006726 ORTHO05D008328 7.9e-97 358.2 366 53.3
arahy.Tifrunner.gnm1.ann1.FL4TQK Arachis hypogaea HOM05D006726 ORTHO05D008328 1.0e-96 357.8 361 52.9
ClCG03G012030 Citrullus lanatus HOM05D006726 ORTHO05D008328 5.1e-96 355.5 366 54.6
Ca_17954_v3 Cicer arietinum L. HOM05D006726 ORTHO05D008328 1.1e-95 354.4 360 53.6
Medtr8g085620 Medicago truncatula HOM05D006726 ORTHO05D008328 4.3e-95 352.4 359 51.3
PGR119G2317 Punica granatum HOM05D006726 ORTHO05D008328 1.8e-93 347.1 357 53.5
Psat7g073840 Pisum sativum HOM05D006726 ORTHO05D008328 6.9e-93 345.1 362 51.1
Lalb_Chr07g0186641 Lupinus albus HOM05D006726 ORTHO05D008328 1.2e-92 344.4 360 51.9
Sed0027506 Sechium edule HOM05D006726 ORTHO05D008328 1.5e-92 344.0 366 52.2
Hund07578 Selenicereus undatus HOM05D006726 ORTHO05D008328 1.0e-91 341.3 366 51.4
Eucgr.J01803 Eucalyptus grandis HOM05D006726 ORTHO05D008328 1.7e-91 340.5 324 55.6
AUR62019186 Chenopodium quinoa HOM05D006726 ORTHO05D008328 3.8e-91 339.3 377 48.3
Lsat_1_v5_gn_6_52180 Lactuca sativa HOM05D006726 ORTHO05D008328 4.9e-91 339.0 366 53.3
Sc09g0000200 Simmondsia chinensis HOM05D006726 ORTHO05D008328 5.5e-90 335.5 328 56.1
Aqoxy1G00428 Aquilegia oxysepala HOM05D006726 ORTHO05D008328 7.1e-90 335.1 359 52.6
CAN.G158.14 Capsicum annuum HOM05D006726 ORTHO05D008328 2.1e-89 333.6 365 52.3
CsaV3_1G043900 Cucumis sativus L. HOM05D006726 ORTHO05D008328 2.1e-89 333.6 366 51.4
Cpa.g.sc119.74 Carica papaya HOM05D006726 ORTHO05D008328 4.6e-89 332.4 328 56.1
CSS0027573 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 7.9e-89 331.6 241 74.7
PGSC0003DMG400032136 Solanum tuberosum HOM05D006726 ORTHO05D008328 2.3e-88 330.1 364 51.1
Solyc01g005930.3 Solanum lycopersicum HOM05D006726 ORTHO05D008328 2.5e-87 326.6 364 51.4
Nitab4.5_0000775g0040 Nicotiana tabacum HOM05D006726 ORTHO05D008328 7.4e-87 325.1 364 51.6
THA.LOC104810333 Tarenaya hassleriana HOM05D006726 ORTHO05D008328 1.1e-85 321.2 367 50.4
Peaxi162Scf00100g00318 Petunia axillaris HOM05D006726 ORTHO05D008328 4.5e-84 315.8 361 49.9
Thecc.09G210400 Theobroma cacao HOM05D006726 ORTHO05D008328 2.9e-83 313.2 366 49.2
Nitab4.5_0001059g0100 Nicotiana tabacum HOM05D006726 ORTHO05D008328 1.1e-82 311.2 366 50.0
Sp1g40950 Schrenkiella parvula HOM05D006726 ORTHO05D008328 1.2e-81 307.8 358 50.3
Thhalv10011547m.g Eutrema salsugineum HOM05D006726 ORTHO05D008328 3.5e-81 306.2 362 48.6
PSO339G4123 Papaver somniferum HOM05D006726 ORTHO05D008328 6.1e-81 305.4 358 49.7
CSS0014249 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 8.7e-80 301.6 150 100.0
CSS0044208 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 8.7e-80 301.6 150 100.0
Sopen01g001940 Solanum pennellii HOM05D006726 ORTHO05D008328 1.1e-79 301.2 364 48.1
Nn2g15797 Nelumbo nucifera HOM05D006726 ORTHO05D008328 1.3e-78 297.7 296 56.1
SGA_v2.0_scaffold6G03420 Striga asiatica HOM05D006726 ORTHO05D008328 4.8e-78 295.8 353 49.3
SalBow6G1149 Salvia bowleyana HOM05D006726 ORTHO05D008328 3.1e-77 293.1 364 51.1
AT1G55280 Arabidopsis thaliana HOM05D006726 ORTHO05D008328 9.0e-77 291.6 361 47.9
CARHR044940 Cardamine hirsuta HOM05D006726 ORTHO05D008328 2.6e-76 290.0 358 49.7
AL1G63330 Arabidopsis lyrata HOM05D006726 ORTHO05D008328 2.2e-75 287.0 364 47.8
PSO384G1418 Papaver somniferum HOM05D006726 ORTHO05D008328 2.2e-75 287.0 359 48.5
BcaC01g01509 Brassica carinata HOM05D006726 ORTHO05D008328 3.8e-75 286.2 361 48.2
C03p92580 Brassica napus HOM05D006726 ORTHO05D008328 5.0e-75 285.8 359 47.9
ATR0001G014 Amborella trichopoda HOM05D006726 ORTHO05D008328 8.5e-75 285.0 378 46.3
A08p00750 Brassica napus HOM05D006726 ORTHO05D008328 8.5e-75 285.0 361 48.8
BraA08t32132Z Brassica rapa HOM05D006726 ORTHO05D008328 8.5e-75 285.0 361 48.8
BolC3t21572H Brassica oleracea HOM05D006726 ORTHO05D008328 4.2e-74 282.7 359 47.6
AUR62000016 Chenopodium quinoa HOM05D001875 ORTHO05D008328 3.6e-73 279.6 284 50.7
Hma1.2p1_0843F.1_g227250 Hydrangea macrophylla HOM05D006726 ORTHO05D008328 1.0e-72 278.1 248 62.5
MBI01_g14456_MAGBIO Magnolia biondii HOM05D006726 ORTHO05D008328 1.5e-71 274.2 371 47.2
CSS0045731 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 9.4e-66 255.0 140 90.7
BcaB04g16967 Brassica carinata HOM05D006726 ORTHO05D008328 6.7e-64 248.8 307 48.9
Carub.0001s4379 Capsella rubella HOM05D006726 ORTHO05D008328 4.4e-63 246.1 309 47.9
HPP92_006110 Vanilla planifolia HOM05D006726 ORTHO05D008328 2.2e-59 233.8 366 41.0
Os11g0491400 Oryza sativa ssp. japonica HOM05D006726 ORTHO05D008328 5.0e-59 232.6 383 40.2
Zm00001eb169450 Zea mays HOM05D006726 ORTHO05D008328 3.7e-54 216.5 357 40.1
CDE06G2716 Ceratophyllum demersum HOM05D006726 ORTHO05D008328 4.8e-46 189.5 358 38.5
MBI01_g46956_MAGBIO Magnolia biondii HOM05D006726 ORTHO05D008328 2.0e-44 184.1 215 48.4
Pp3c13_13690 Physcomitrium patens HOM05D006726 ORTHO05D008328 7.5e-39 165.6 347 36.3
Aa31LG10G1050 Aethionema arabicum HOM05D006726 ORTHO05D008328 1.0e-35 155.2 240 42.5
Mapoly0036s0044 Marchantia polymorpha HOM05D006726 ORTHO05D008328 4.0e-32 143.3 395 29.9
unitig_749.g13586 Utricularia gibba HOM05D006726 ORTHO05D008328 5.7e-31 139.4 182 47.3
BcaC01g01511 Brassica carinata HOM05D006726 ORTHO05D008328 1.6e-28 131.3 160 49.4
C03p92600 Brassica napus HOM05D006726 ORTHO05D008328 2.0e-28 131.0 134 52.2
MBI01_g46957_MAGBIO Magnolia biondii HOM05D006726 ORTHO05D008328 2.3e-24 117.5 135 51.1
CDE08G1235 Ceratophyllum demersum HOM05D004967 ORTHO05D006146 5.2e-24 116.3 209 38.8
SMO268G0018 Selaginella moellendorffii HOM05D006726 ORTHO05D008328 2.0e-23 114.4 341 30.8
AagrBONN_evm.TU.Sc2ySwM_368.685 Anthoceros agrestis HOM05D006726 ORTHO05D008328 5.8e-23 112.8 343 31.2
unitig_749.g13585 Utricularia gibba HOM05D006726 ORTHO05D008328 1.9e-21 107.8 142 43.0
MCO10G213 Micromonas commoda HOM05D006726 ORTHO05D008328 1.1e-08 65.5 267 25.8
CBR_g4449 Chara braunii HOM05D006726 ORTHO05D008328 6.4e-06 56.2 131 32.8


User provided reference genes

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