Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0004739 Camellia sinensis var. sinensis HOM05D007890 ORTHO05D009945 3.1e-81 305.1 154 100.0
Rhsim13G0220700 Rhododendron simsii HOM05D007890 ORTHO05D009945 1.9e-14 83.2 68 66.2
Actinidia06910 Actinidia chinensis HOM05D007890 ORTHO05D009945 1.6e-13 80.1 67 56.7
vmacro04152 Vaccinium macrocarpon HOM05D007890 ORTHO05D009945 1.6e-13 80.1 65 69.2
Dinv36254 Davidia involucrata HOM05D007890 ORTHO05D009945 3.6e-13 79.0 67 65.7
Oeu025872.1 Olea europaea HOM05D007890 ORTHO05D009945 3.8e-10 68.9 57 63.2
TAR633G1231 Trochodendron aralioides HOM05D007890 ORTHO05D009945 3.8e-10 68.9 55 67.3
Lj1P329T66 Lonicera japonica HOM05D007890 ORTHO05D009945 6.4e-10 68.2 62 61.3
QL01p004625 Quercus lobata HOM05D007890 ORTHO05D009945 6.4e-10 68.2 68 57.4
TAR633G1577 Trochodendron aralioides HOM05D007890 ORTHO05D009945 1.9e-09 66.6 56 60.7
PSO724G0038 Papaver somniferum HOM05D007890 ORTHO05D009945 4.2e-09 65.5 56 57.1
EL10Ac4g10243 Beta vulgaris HOM05D007890 ORTHO05D009945 7.1e-09 64.7 64 51.6
Nitab4.5_0002741g0090 Nicotiana tabacum HOM05D007890 ORTHO05D009945 7.1e-09 64.7 57 61.4
Peaxi162Scf00004g02526 Petunia axillaris HOM05D007890 ORTHO05D009945 1.2e-08 63.9 57 59.6
Nitab4.5_0001587g0050 Nicotiana tabacum HOM05D007890 ORTHO05D009945 3.5e-08 62.4 57 56.1
PSO423G0105 Papaver somniferum HOM05D007890 ORTHO05D009945 3.5e-08 62.4 56 53.6
Potri.001G257400 Populus trichocarpa HOM05D007890 ORTHO05D009945 4.6e-08 62.0 58 53.4
Hma1.2p1_0606F.1_g188050 Hydrangea macrophylla HOM05D007890 ORTHO05D009945 1.0e-07 60.8 55 52.7
Atru.chr3.2706 Acer truncatum HOM05D007890 ORTHO05D009945 1.8e-07 60.1 64 54.7
Ah.06g194130 Amaranthus hybridus HOM05D007890 ORTHO05D009945 2.3e-07 59.7 64 51.6
Duzib170G0138 Durio zibethinus HOM05D007890 ORTHO05D009945 3.0e-07 59.3 61 52.5
Sp2g13290 Schrenkiella parvula HOM05D007890 ORTHO05D009945 3.9e-07 58.9 45 66.7
Sabra16G0157400 Salix brachista HOM05D007890 ORTHO05D009945 5.1e-07 58.5 58 50.0
PGSC0003DMG400033336 Solanum tuberosum HOM05D007890 ORTHO05D009945 5.1e-07 58.5 57 52.6
Aqoxy2G00189 Aquilegia oxysepala HOM05D007890 ORTHO05D009945 6.7e-07 58.2 47 57.4
BcaC06g31267 Brassica carinata HOM05D007890 ORTHO05D009945 8.7e-07 57.8 47 61.7
Gohir.A05G069600 Gossypium hirsutum HOM05D007890 ORTHO05D009945 8.7e-07 57.8 62 54.8
Gohir.D05G072500 Gossypium hirsutum HOM05D007890 ORTHO05D009945 8.7e-07 57.8 62 54.8
Gorai.009G073500 Gossypium raimondii HOM05D007890 ORTHO05D009945 8.7e-07 57.8 62 54.8
SalBow5G2971 Salvia bowleyana HOM05D007890 ORTHO05D009945 8.7e-07 57.8 45 57.8
GSVIVG01025250001 Vitis vinifera HOM05D007890 ORTHO05D009945 8.7e-07 57.8 51 62.7
CARHR144430 Cardamine hirsuta HOM05D007890 ORTHO05D009945 1.1e-06 57.4 47 61.7
AL5G10980 Arabidopsis lyrata HOM05D007890 ORTHO05D009945 1.5e-06 57.0 47 61.7
AT2G01870 Arabidopsis thaliana HOM05D007890 ORTHO05D009945 1.5e-06 57.0 47 61.7
Carub.0005s0083 Capsella rubella HOM05D007890 ORTHO05D009945 1.9e-06 56.6 47 61.7
Cfa009778 Carpinus fangiana HOM05D007890 ORTHO05D009945 1.9e-06 56.6 68 52.9
Solyc11g065680.1 Solanum lycopersicum HOM05D007890 ORTHO05D009945 2.5e-06 56.2 57 50.9
Sopen11g025420 Solanum pennellii HOM05D007890 ORTHO05D009945 2.5e-06 56.2 57 50.9
BcaC06g34102 Brassica carinata HOM05D007890 ORTHO05D009945 3.3e-06 55.8 45 62.2
A06p43960 Brassica napus HOM05D001297 ORTHO05D001135 3.3e-06 55.8 45 62.2
C07p32670 Brassica napus HOM05D001297 ORTHO05D001135 3.3e-06 55.8 45 62.2
BolC7t43788H Brassica oleracea HOM05D001297 ORTHO05D001135 3.3e-06 55.8 45 62.2
BraA06t27271Z Brassica rapa HOM05D001297 ORTHO05D001135 3.3e-06 55.8 45 62.2
FvH4_3g28750 Fragaria vesca HOM05D007890 ORTHO05D009945 3.3e-06 55.8 66 50.0
FAN11G2622 Fragaria x ananassa HOM05D007890 ORTHO05D009945 3.3e-06 55.8 66 50.0
THA.LOC104801952 Tarenaya hassleriana HOM05D007890 ORTHO05D009945 5.6e-06 55.1 45 66.7
Thecc.09G234600 Theobroma cacao HOM05D007890 ORTHO05D009945 5.6e-06 55.1 58 55.2
Thhalv10005015m.g Eutrema salsugineum HOM05D007890 ORTHO05D009945 9.6e-06 54.3 45 60.0
FAN16G0819 Fragaria x ananassa HOM05D007890 ORTHO05D009945 9.6e-06 54.3 66 48.5
TPR.G14719 Trifolium pratense HOM05D005961 ORTHO05D007391 9.6e-06 54.3 41 70.7


User provided reference genes

Program Settings