Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0004734 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 2.1e-42 175.3 88 100.0
CSS0021921 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 3.5e-21 104.8 62 87.1
CSS0001174 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.6e-18 95.9 71 70.4
CSS0001345 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.6e-18 95.9 71 70.4
CSS0013307 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.6e-18 95.9 71 70.4
CSS0017826 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.6e-18 95.9 71 70.4
CSS0026447 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.6e-18 95.9 71 70.4
CSS0026772 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.6e-18 95.9 71 70.4
CSS0049921 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.6e-18 95.9 71 70.4
CSS0003769 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 4.8e-18 94.4 71 69.0
CSS0004443 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.4e-17 92.8 71 69.0
CSS0032723 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 4.1e-17 91.3 83 65.1
CSS0047120 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 4.1e-17 91.3 71 67.6
CSS0004685 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 3.3e-11 71.6 45 73.3
CSS0008205 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 3.3e-11 71.6 45 73.3
CSS0021747 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 3.3e-11 71.6 45 73.3
CSS0022173 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 3.3e-11 71.6 45 73.3
CSS0029753 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 3.3e-11 71.6 45 73.3
CSS0031004 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 3.3e-11 71.6 45 73.3
CSS0034332 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 3.3e-11 71.6 45 73.3
CSS0045394 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 3.3e-11 71.6 45 73.3
CSS0047376 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 3.3e-11 71.6 45 73.3
CSS0003759 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 7.4e-11 70.5 45 71.1
CSS0038208 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.7e-10 69.3 45 68.9
Rhsim05G0212100 Rhododendron simsii HOM05D007798 ORTHO05D009882 2.8e-10 68.6 68 48.5
Rhsim11G0007300 Rhododendron simsii HOM05D007798 ORTHO05D009882 2.8e-10 68.6 68 48.5
Rhsim02G0017800 Rhododendron simsii HOM05D007798 ORTHO05D009882 3.7e-10 68.2 68 47.1
CSS0033268 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 4.8e-10 67.8 45 71.1
Rhsim11G0017600 Rhododendron simsii HOM05D007798 ORTHO05D009882 1.8e-09 65.9 68 45.6
Rhsim01G0156700 Rhododendron simsii HOM05D007798 ORTHO05D009882 5.3e-09 64.3 47 61.7
Rhsim11G0003100 Rhododendron simsii HOM05D007798 ORTHO05D009882 5.3e-09 64.3 44 61.4
Rhsim06G0104000 Rhododendron simsii HOM05D007798 ORTHO05D009882 9.1e-09 63.5 44 63.6
Rhsim11G0057000 Rhododendron simsii HOM05D007798 ORTHO05D009882 9.1e-09 63.5 47 61.7
Rhsim03G0114400 Rhododendron simsii HOM05D007798 ORTHO05D009882 1.5e-08 62.8 47 61.7
Rhsim05G0032900 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.4e-08 61.6 44 61.4
RhsimUnG0063700 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.4e-08 61.6 44 61.4
Rhsim02G0157700 Rhododendron simsii HOM05D000107 ORTHO05D000062 4.5e-08 61.2 44 59.1
Rhsim09G0076000 Rhododendron simsii HOM05D000107 ORTHO05D000062 4.5e-08 61.2 44 61.4
CSS0035454 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D015543 5.9e-08 60.8 43 62.8
Rhsim03G0060900 Rhododendron simsii HOM05D007798 ORTHO05D009882 7.7e-08 60.5 47 59.6
Rhsim06G0076200 Rhododendron simsii HOM05D000107 ORTHO05D009882 7.7e-08 60.5 47 59.6
RhsimUnG0041700 Rhododendron simsii HOM05D007798 ORTHO05D009882 1.0e-07 60.1 44 59.1
Rhsim02G0156600 Rhododendron simsii HOM05D007798 ORTHO05D009882 1.7e-07 59.3 71 42.3
Rhsim06G0120600 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.9e-07 58.5 44 59.1
Rhsim09G0073700 Rhododendron simsii HOM05D007798 ORTHO05D009882 2.9e-07 58.5 43 62.8
Rhsim01G0150700 Rhododendron simsii HOM05D007798 ORTHO05D009882 3.8e-07 58.2 41 65.9
Rhsim01G0063300 Rhododendron simsii HOM05D007798 ORTHO05D009882 2.5e-06 55.5 42 61.9


User provided reference genes

Program Settings