Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0004719 Camellia sinensis var. sinensis HOM05D012909 ORTHO05D012446 2.6e-96 355.5 202 100.0
CSS0049901 Camellia sinensis var. sinensis HOM05D012909 ORTHO05D012446 1.0e-87 327.0 236 76.7
CSS0018389 Camellia sinensis var. sinensis HOM05D012909 ORTHO05D012446 2.1e-85 319.3 240 80.4
CSS0004773 Camellia sinensis var. sinensis HOM05D012909 ORTHO05D012446 1.2e-83 313.5 238 79.4
CSS0017669 Camellia sinensis var. sinensis HOM05D012909 ORTHO05D012446 1.2e-83 313.5 211 78.2
Rhsim07G0026600 Rhododendron simsii HOM05D012909 ORTHO05D012446 1.9e-22 110.2 170 38.2
Pp3c4_1870 Physcomitrium patens HOM05D001104 ORTHO05D006285 4.6e-08 62.4 154 29.9
vmacro19785 Vaccinium macrocarpon HOM05D012909 ORTHO05D012446 6.1e-08 62.0 190 27.4
Ciclev10020491m.g Citrus clementina HOM05D001104 ORTHO05D012446 1.3e-07 60.8 186 27.4
Rhsim02G0099000 Rhododendron simsii HOM05D012909 ORTHO05D012446 1.9e-06 57.0 215 26.0
Os11g0246600 Oryza sativa ssp. japonica HOM05D005214 ORTHO05D005861 4.3e-06 55.8 148 30.4
SMO145G0086 Selaginella moellendorffii HOM05D001104 ORTHO05D006285 4.3e-06 55.8 198 26.3
Zm00001eb168260 Zea mays HOM05D005214 ORTHO05D005861 4.3e-06 55.8 172 29.1
MBI02_g33229_MAGBIO Magnolia biondii HOM05D001104 ORTHO05D006285 5.7e-06 55.5 139 33.1
MSTRG.24019 Avicennia marina HOM05D001104 ORTHO05D006285 7.4e-06 55.1 197 25.4
MD17G1034100 Malus domestica HOM05D001104 ORTHO05D006285 7.4e-06 55.1 139 32.4
Ah.06g187130 Amaranthus hybridus HOM05D001104 ORTHO05D006285 9.7e-06 54.7 185 26.5
arahy.Tifrunner.gnm1.ann1.M213TK Arachis hypogaea HOM05D001104 ORTHO05D006285 9.7e-06 54.7 139 31.7
arahy.Tifrunner.gnm1.ann1.QHR6Q8 Arachis hypogaea HOM05D001104 ORTHO05D006285 9.7e-06 54.7 139 31.7
SEGI_26747 Sequoiadendron giganteum HOM05D001104 ORTHO05D006285 9.7e-06 54.7 121 33.1
Sc16g0003610 Simmondsia chinensis HOM05D001104 ORTHO05D006285 9.7e-06 54.7 139 31.7


User provided reference genes

Program Settings