Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0004716 Camellia sinensis var. sinensis HOM05D029954 ORTHO05D022123 3.5e-49 198.0 101 100.0
CSS0005903 Camellia sinensis var. sinensis HOM05D029954 ORTHO05D022123 2.4e-37 158.7 96 85.4
CSS0042954 Camellia sinensis var. sinensis HOM05D029954 ORTHO05D022123 5.9e-36 154.1 130 67.7
Rhsim11G0068500 Rhododendron simsii HOM05D007230 ORTHO05D004756 7.2e-10 67.4 41 80.5
Rhsim04G0054200 Rhododendron simsii HOM05D007230 ORTHO05D004756 9.4e-10 67.0 56 64.3
Rhsim07G0087400 Rhododendron simsii HOM05D007230 ORTHO05D004756 1.6e-09 66.2 41 80.5
Rhsim11G0119100 Rhododendron simsii HOM05D007230 ORTHO05D004756 1.6e-09 66.2 41 80.5
CSS0016168 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 3.6e-09 65.1 70 58.6
CSS0024569 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 3.6e-09 65.1 70 58.6
CSS0042753 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 3.6e-09 65.1 70 58.6
CSS0043112 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 3.6e-09 65.1 70 58.6
Rhsim04G0107400 Rhododendron simsii HOM05D007230 ORTHO05D004756 3.6e-09 65.1 53 66.0
Rhsim01G0194900 Rhododendron simsii HOM05D007230 ORTHO05D004756 4.7e-09 64.7 41 78.0
TWI73G0803 Tripterygium wilfordii HOM05D007230 ORTHO05D004756 4.0e-08 61.6 68 54.4
Rhsim05G0139800 Rhododendron simsii HOM05D007230 ORTHO05D004756 6.7e-08 60.8 62 61.3
Rhsim06G0147600 Rhododendron simsii HOM05D007230 ORTHO05D022123 6.7e-08 60.8 41 75.6
CSS0015235 Camellia sinensis var. sinensis HOM05D001396 ORTHO05D000493 2.0e-07 59.3 41 75.6
CSS0045907 Camellia sinensis var. sinensis HOM05D001396 ORTHO05D000493 2.0e-07 59.3 41 75.6
Rhsim11G0089400 Rhododendron simsii HOM05D007230 ORTHO05D004756 2.6e-07 58.9 64 53.1
Rhsim08G0173500 Rhododendron simsii HOM05D007230 ORTHO05D004756 2.2e-06 55.8 48 58.3
COL.COLO4_04631 Corchorus olitorius HOM05D007230 ORTHO05D022123 6.3e-06 54.3 59 50.8


User provided reference genes

Program Settings