Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0004703 Camellia sinensis var. sinensis HOM05D007898 ORTHO05D010010 2.4e-90 335.5 172 100.0
CSS0023760 Camellia sinensis var. sinensis HOM05D007898 ORTHO05D010010 6.6e-88 327.4 172 98.8
GSVIVG01019045001 Vitis vinifera HOM05D007898 ORTHO05D010010 6.7e-48 194.5 172 58.7
Hma1.2p1_0261F.1_g104820 Hydrangea macrophylla HOM05D007898 ORTHO05D010010 3.7e-46 188.7 156 62.8
Dinv26786 Davidia involucrata HOM05D007898 ORTHO05D010010 5.3e-45 184.9 128 71.9
TWI73G0930 Tripterygium wilfordii HOM05D007898 ORTHO05D010010 3.8e-43 178.7 171 56.7
Sabra07G0028800 Salix brachista HOM05D007898 ORTHO05D010010 6.4e-43 177.9 163 55.8
TAR381G0528 Trochodendron aralioides HOM05D007898 ORTHO05D010010 6.4e-43 177.9 173 53.8
CiPaw.02G014000 Carya illinoinensis HOM05D007898 ORTHO05D010010 5.5e-42 174.9 173 54.3
PGR142G0285 Punica granatum HOM05D007898 ORTHO05D010010 7.9e-41 171.0 173 55.5
Oeu043831.1 Olea europaea HOM05D007898 ORTHO05D010010 1.0e-40 170.6 172 54.1
Thecc.01G044100 Theobroma cacao HOM05D007898 ORTHO05D010010 1.3e-40 170.2 173 54.9
Potri.007G032900 Populus trichocarpa HOM05D007898 ORTHO05D010010 1.8e-40 169.9 165 53.9
RcHm_v2.0_Chr2g0103011 Rosa chinensis HOM05D007898 ORTHO05D010010 2.3e-40 169.5 172 54.1
Manes.12G096600 Manihot esculenta HOM05D007898 ORTHO05D010010 3.0e-40 169.1 165 50.9
CANSAT01G0863 Cannabis sativa HOM05D007898 ORTHO05D010010 8.7e-40 167.5 172 53.5
Peaxi162Scf00535g00419 Petunia axillaris HOM05D007898 ORTHO05D010010 7.4e-39 164.5 178 53.9
Sopen02g034650 Solanum pennellii HOM05D007898 ORTHO05D010010 7.4e-39 164.5 174 54.0
Cfa004248 Carpinus fangiana HOM05D007898 ORTHO05D010010 1.3e-38 163.7 175 55.4
Eucgr.K01101 Eucalyptus grandis HOM05D007898 ORTHO05D010010 1.6e-38 163.3 173 54.3
FAN23G0801 Fragaria x ananassa HOM05D007898 ORTHO05D010010 2.1e-38 162.9 165 52.1
FAN28G1054 Fragaria x ananassa HOM05D007898 ORTHO05D010010 4.8e-38 161.8 165 52.1
QL06p044475 Quercus lobata HOM05D007898 ORTHO05D010010 1.1e-37 160.6 165 52.7
Lj7P13T39 Lonicera japonica HOM05D007898 ORTHO05D010010 1.4e-37 160.2 149 55.7
Nitab4.5_0004932g0020 Nicotiana tabacum HOM05D007898 ORTHO05D010010 1.4e-37 160.2 174 54.6
PGSC0003DMG400010085 Solanum tuberosum HOM05D007898 ORTHO05D010010 1.4e-37 160.2 163 54.6
ClCG01G016310 Citrullus lanatus HOM05D007898 ORTHO05D010010 2.4e-37 159.5 172 51.7
Migut.K00847 Erythranthe guttata HOM05D007898 ORTHO05D010010 3.1e-37 159.1 174 52.3
MELO3C007502.2 Cucumis melo HOM05D007898 ORTHO05D010010 5.3e-37 158.3 172 51.7
FvH4_1g14340 Fragaria vesca HOM05D007898 ORTHO05D010010 5.3e-37 158.3 165 51.5
CsaV3_6G042630 Cucumis sativus L. HOM05D007898 ORTHO05D010010 9.0e-37 157.5 172 50.0
Prupe.7G146700 Prunus persica HOM05D007898 ORTHO05D010010 1.5e-36 156.8 180 50.0
Nitab4.5_0000483g0020 Nicotiana tabacum HOM05D007898 ORTHO05D010010 2.0e-36 156.4 162 54.9
Gohir.D03G018100 Gossypium hirsutum HOM05D007898 ORTHO05D010010 2.6e-36 156.0 173 51.4
MD15G1271500 Malus domestica HOM05D007898 ORTHO05D010010 3.4e-36 155.6 166 52.4
Nn1g05126 Nelumbo nucifera HOM05D007898 ORTHO05D010010 3.4e-36 155.6 173 50.3
Gohir.A02G162400 Gossypium hirsutum HOM05D007898 ORTHO05D010010 4.5e-36 155.2 173 52.0
PSO170G4740 Papaver somniferum HOM05D007898 ORTHO05D010010 1.7e-35 153.3 174 51.7
CAN.G836.11 Capsicum annuum HOM05D007898 ORTHO05D010010 2.9e-35 152.5 174 54.0
Sed0027812 Sechium edule HOM05D007898 ORTHO05D010010 2.9e-35 152.5 174 51.1
Solyc02g089960.3 Solanum lycopersicum HOM05D007898 ORTHO05D010010 2.9e-35 152.5 172 52.3
TPR.G31555 Trifolium pratense HOM05D007898 ORTHO05D010010 2.9e-35 152.5 172 48.3
Gohir.D04G029100 Gossypium hirsutum HOM05D007898 ORTHO05D010010 3.8e-35 152.1 173 52.0
Gohir.D04G023900 Gossypium hirsutum HOM05D007898 ORTHO05D010010 1.2e-33 147.1 181 49.2
Gorai.012G033200 Gossypium raimondii HOM05D007898 ORTHO05D010010 1.6e-33 146.7 181 49.7
arahy.Tifrunner.gnm1.ann1.P18VIJ Arachis hypogaea HOM05D007898 ORTHO05D010010 2.1e-33 146.4 162 51.2
Gohir.D04G023600 Gossypium hirsutum HOM05D007898 ORTHO05D010010 7.9e-33 144.4 178 48.9
Ah.03g142230 Amaranthus hybridus HOM05D007898 ORTHO05D010010 3.9e-32 142.1 159 48.4
THA.LOC104819816 Tarenaya hassleriana HOM05D007898 ORTHO05D010010 8.7e-32 141.0 174 49.4
Gohir.A05G386500 Gossypium hirsutum HOM05D007898 ORTHO05D010010 3.3e-31 139.0 172 50.0
Cc07_g05300 Coffea canephora HOM05D007898 ORTHO05D010010 1.6e-30 136.7 171 50.3
AT2G23755 Arabidopsis thaliana HOM05D007898 ORTHO05D010010 2.8e-30 136.0 172 48.8
SalBow1G4022 Salvia bowleyana HOM05D007898 ORTHO05D010010 2.4e-29 132.9 161 50.3
arahy.Tifrunner.gnm1.ann1.376QVY Arachis hypogaea HOM05D007898 ORTHO05D010010 2.6e-28 129.4 118 55.1
Gorai.003G018300 Gossypium raimondii HOM05D007898 ORTHO05D010010 2.6e-28 129.4 179 48.0
AL4G13750 Arabidopsis lyrata HOM05D007898 ORTHO05D010010 3.4e-28 129.0 175 43.4
FAN26G2880 Fragaria x ananassa HOM05D007898 ORTHO05D010010 3.4e-28 129.0 140 49.3
Carub.0004s0293 Capsella rubella HOM05D007898 ORTHO05D010010 1.0e-27 127.5 170 45.9
CDE02G3439 Ceratophyllum demersum HOM05D007898 ORTHO05D010010 1.7e-27 126.7 151 47.7
AUR62008035 Chenopodium quinoa HOM05D007898 ORTHO05D010010 1.4e-26 123.6 141 47.5
ATR0053G039 Amborella trichopoda HOM05D007898 ORTHO05D010010 2.5e-26 122.9 165 45.5
CARHR114600 Cardamine hirsuta HOM05D007898 ORTHO05D010010 6.1e-25 118.2 175 42.9
Thhalv10000478m.g Eutrema salsugineum HOM05D007898 ORTHO05D010010 6.1e-25 118.2 193 41.5
Actinidia30992 Actinidia chinensis HOM05D007898 ORTHO05D010010 1.0e-24 117.5 173 46.8
SGA_v2.0_scaffold62G21534 Striga asiatica HOM05D007898 ORTHO05D010010 1.0e-24 117.5 148 48.0
AUR62003213 Chenopodium quinoa HOM05D007898 ORTHO05D010010 2.5e-23 112.8 104 51.9
Hund14127 Selenicereus undatus HOM05D007898 ORTHO05D010010 2.5e-23 112.8 167 41.3
Ciclev10027359m.g Citrus clementina HOM05D007898 ORTHO05D010010 4.3e-23 112.1 138 47.1
SHI08702 Sapria himalayana HOM05D007898 ORTHO05D010010 4.3e-23 112.1 112 50.9
EL10Ac6g14865 Beta vulgaris HOM05D007898 ORTHO05D010010 1.1e-21 107.5 148 44.6
BolC8t51548H Brassica oleracea HOM05D007898 ORTHO05D010010 5.9e-20 101.7 144 45.1
A09p56800 Brassica napus HOM05D007898 ORTHO05D010010 7.7e-20 101.3 144 44.4
TAR374G1689 Trochodendron aralioides HOM05D007898 ORTHO05D010010 1.7e-19 100.1 79 59.5
C08p39760 Brassica napus HOM05D007898 ORTHO05D010010 2.2e-19 99.8 144 43.8
Lj4g0012479 Lotus japonicus HOM05D007898 ORTHO05D010010 8.5e-19 97.8 117 46.2
BraA09t41069Z Brassica rapa HOM05D007898 ORTHO05D010010 7.2e-18 94.7 102 51.0
FAN19G2518 Fragaria x ananassa HOM05D007898 ORTHO05D010010 6.7e-16 88.2 102 50.0
SEGI_13764 Sequoiadendron giganteum HOM05D007898 ORTHO05D010010 6.7e-16 88.2 119 46.2
CDE02G3192 Ceratophyllum demersum HOM05D007898 ORTHO05D010010 1.5e-15 87.0 128 43.0
Haze_15152 Corylus avellana HOM05D007898 ORTHO05D010010 6.9e-13 78.2 178 36.5


User provided reference genes

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