Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0004693 Camellia sinensis var. sinensis HOM05D008372 ORTHO05D010559 8.9e-202 706.8 385 100.0
CSS0035068 Camellia sinensis var. sinensis HOM05D008372 ORTHO05D010559 3.7e-200 701.4 385 99.2
Dinv34822 Davidia involucrata HOM05D008372 ORTHO05D010559 2.4e-146 522.7 359 73.8
Actinidia36321 Actinidia chinensis HOM05D008372 ORTHO05D010559 4.1e-138 495.4 319 77.1
Rhsim10G0067200 Rhododendron simsii HOM05D008372 ORTHO05D010559 6.5e-136 488.0 357 70.6
QL02p051398 Quercus lobata HOM05D008372 ORTHO05D010559 1.6e-134 483.4 343 70.8
COL.COLO4_09329 Corchorus olitorius HOM05D008372 ORTHO05D010559 3.2e-127 459.1 317 71.0
Prupe.8G147100 Prunus persica HOM05D008372 ORTHO05D010559 1.2e-126 457.2 342 68.1
GSVIVG01031022001 Vitis vinifera HOM05D008372 ORTHO05D010559 3.6e-126 455.7 299 75.6
Gohir.A07G173100 Gossypium hirsutum HOM05D008372 ORTHO05D010559 1.2e-124 450.7 310 71.6
Thecc.04G133800 Theobroma cacao HOM05D008372 ORTHO05D010559 1.5e-124 450.3 313 70.9
Gohir.D07G181100 Gossypium hirsutum HOM05D008372 ORTHO05D010559 2.2e-123 446.4 316 69.9
Gorai.001G202000 Gossypium raimondii HOM05D008372 ORTHO05D010559 2.8e-123 446.0 316 69.9
Ciclev10013657m.g Citrus clementina HOM05D008372 ORTHO05D010559 6.3e-123 444.9 331 68.3
Nitab4.5_0004398g0020 Nicotiana tabacum HOM05D008372 ORTHO05D010559 9.5e-119 431.0 320 66.6
Cpa.g.sc282.9 Carica papaya HOM05D008372 ORTHO05D010559 4.0e-117 425.6 270 77.4
Haze_14152 Corylus avellana HOM05D008372 ORTHO05D010559 8.8e-117 424.5 342 64.6
CANSAT78G1639 Cannabis sativa HOM05D008372 ORTHO05D010559 1.2e-116 424.1 329 64.4
Sopen02g014250 Solanum pennellii HOM05D008372 ORTHO05D010559 1.2e-116 424.1 334 65.3
PGSC0003DMG400024192 Solanum tuberosum HOM05D008372 ORTHO05D010559 3.4e-116 422.5 331 64.7
CAN.G225.5 Capsicum annuum HOM05D008372 ORTHO05D010559 2.2e-115 419.9 332 65.1
Aqoxy3G00272 Aquilegia oxysepala HOM05D008372 ORTHO05D010559 3.1e-114 416.0 305 68.5
TAR629G0699 Trochodendron aralioides HOM05D008372 ORTHO05D010559 1.6e-113 413.7 310 69.4
PSO384G0617 Papaver somniferum HOM05D008372 ORTHO05D010559 2.5e-111 406.4 334 60.8
PSO339G4146 Papaver somniferum HOM05D008372 ORTHO05D010559 2.3e-109 399.8 341 59.5
SGA_v2.0_scaffold329G48876 Striga asiatica HOM05D008372 ORTHO05D010559 1.5e-108 397.1 286 66.1
Cfa007923 Carpinus fangiana HOM05D006225 ORTHO05D010559 2.2e-107 393.3 253 77.5
Atru.chr1.1698 Acer truncatum HOM05D008372 ORTHO05D010559 6.4e-107 391.7 296 66.2
Nn4g23872 Nelumbo nucifera HOM05D008372 ORTHO05D010559 9.8e-100 367.9 271 68.3
PGR004G0240 Punica granatum HOM05D008372 ORTHO05D010559 9.8e-100 367.9 372 54.8
CANSAT78G1437 Cannabis sativa HOM05D008372 ORTHO05D010559 1.6e-94 350.5 241 71.4
Nitab4.5_0001217g0010 Nicotiana tabacum HOM05D008372 ORTHO05D010559 1.6e-94 350.5 326 56.7
Pp3c9_18240 Physcomitrium patens HOM05D008372 ORTHO05D010559 2.5e-87 326.6 292 56.8
AagrBONN_evm.TU.Sc2ySwM_117.1277 Anthoceros agrestis HOM05D008372 ORTHO05D010559 3.6e-86 322.8 280 56.4
HPP92_024422 Vanilla planifolia HOM05D008372 ORTHO05D010559 2.6e-84 316.6 294 55.4
Mapoly0081s0037 Marchantia polymorpha HOM05D008372 ORTHO05D010559 4.4e-84 315.8 283 56.9
CBR_g23242 Chara braunii HOM05D008372 ORTHO05D010559 1.0e-80 304.7 299 50.8
Nn8g38834 Nelumbo nucifera HOM05D008372 ORTHO05D010559 8.6e-80 301.6 226 67.7
SMO356G0307 Selaginella moellendorffii HOM05D008372 ORTHO05D010559 8.6e-80 301.6 288 54.2
Nn1g03461 Nelumbo nucifera HOM05D008372 ORTHO05D010559 3.4e-76 289.7 214 67.3
Migut.L00318 Erythranthe guttata HOM05D008372 ORTHO05D010559 7.1e-58 228.8 157 66.2
PRCOL_00000444 Prasinoderma coloniale HOM05D008372 ORTHO05D010559 4.8e-54 216.1 254 46.5
Solyc02g063190.2 Solanum lycopersicum HOM05D008372 ORTHO05D010559 8.4e-51 205.3 173 60.1
SEGI_35369 Sequoiadendron giganteum HOM05D008372 ORTHO05D010559 7.1e-50 202.2 166 59.0
Solyc02g063180.4 Solanum lycopersicum HOM05D008372 ORTHO05D010559 1.6e-49 201.1 140 72.1
Cc07_g08820 Coffea canephora HOM05D008372 ORTHO05D010559 3.9e-48 196.4 161 59.0
Peaxi162Scf00501g00324 Petunia axillaris HOM05D008372 ORTHO05D010559 6.3e-46 189.1 175 58.3
Peaxi162Scf00501g00319 Petunia axillaris HOM05D008372 ORTHO05D010559 1.5e-44 184.5 140 65.7
Nn1g03560 Nelumbo nucifera HOM05D008372 ORTHO05D010559 9.3e-42 175.3 207 51.7
Actinidia15884 Actinidia chinensis HOM05D008372 ORTHO05D010559 2.1e-41 174.1 117 80.3
Oeu008425.1 Olea europaea HOM05D008372 ORTHO05D010559 4.6e-41 172.9 148 60.8
Nn4g22381 Nelumbo nucifera HOM05D008372 ORTHO05D010559 1.0e-40 171.8 137 67.9
Nn7g36676 Nelumbo nucifera HOM05D008372 ORTHO05D010559 3.4e-36 156.8 131 62.6
RcHm_v2.0_Chr6g0252551 Rosa chinensis HOM05D008372 ORTHO05D010559 7.4e-31 139.0 81 77.8
Potri.004G099466 Populus trichocarpa HOM05D008372 ORTHO05D010559 2.4e-29 134.0 106 64.2
vmacro05555 Vaccinium macrocarpon HOM05D006225 ORTHO05D007676 7.2e-18 95.9 134 44.0
FAN15G2669 Fragaria x ananassa HOM05D008372 ORTHO05D010559 1.8e-08 64.7 62 54.8
Potri.017G115002 Populus trichocarpa HOM05D008372 ORTHO05D010559 3.0e-08 63.9 62 62.9


User provided reference genes

Program Settings