Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0004680 Camellia sinensis var. sinensis HOM05D005276 ORTHO05D006813 5.8e-114 414.5 243 100.0
Hma1.2p1_0370F.1_g137770 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 4.6e-79 298.5 238 62.2
vmacro22834 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 5.5e-72 275.0 238 60.5
Rhsim05G0197900 Rhododendron simsii HOM05D005276 ORTHO05D006813 3.5e-71 272.3 238 60.5
CSS0029999 Camellia sinensis var. sinensis HOM05D005276 ORTHO05D006813 6.1e-71 271.6 149 86.6
Rhsim05G0142600 Rhododendron simsii HOM05D005276 ORTHO05D006813 7.4e-69 264.6 244 55.7
RcHm_v2.0_Chr5g0076681 Rosa chinensis HOM05D005276 ORTHO05D006813 1.1e-67 260.8 252 54.8
Rhsim04G0165600 Rhododendron simsii HOM05D005276 ORTHO05D006813 4.1e-67 258.8 237 59.1
Actinidia07622 Actinidia chinensis HOM05D005276 ORTHO05D006813 5.0e-65 251.9 244 55.7
Hma1.2p1_0472F.1_g160020 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 1.1e-64 250.8 225 58.7
Hma1.2p1_0052F.1_g030780 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 1.2e-63 247.3 225 58.2
Hma1.2p1_0472F.1_g160005 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 1.2e-63 247.3 225 58.2
TWI23G0671 Tripterygium wilfordii HOM05D005276 ORTHO05D006813 7.4e-61 238.0 248 52.0
Rhsim04G0073100 Rhododendron simsii HOM05D005276 ORTHO05D006813 1.8e-59 233.4 225 56.0
vmacro00373 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 1.0e-57 227.6 153 73.2
Hma1.2p1_2291F.1_g319080 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 2.9e-57 226.1 188 61.7
Rhsim04G0116800 Rhododendron simsii HOM05D005276 ORTHO05D006813 1.9e-56 223.4 224 54.0
Rhsim08G0006900 Rhododendron simsii HOM05D005276 ORTHO05D006813 4.2e-56 222.2 224 53.6
Hma1.2p1_0472F.1_g159990 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 4.7e-55 218.8 206 55.3
AUR62014758 Chenopodium quinoa HOM05D005276 ORTHO05D006813 7.9e-55 218.0 227 53.3
PGR031G1219 Punica granatum HOM05D005276 ORTHO05D006813 7.7e-50 201.4 217 49.3
Medtr8g038100 Medicago truncatula HOM05D005276 ORTHO05D006813 3.8e-49 199.1 250 46.4
Medtr0695s0030 Medicago truncatula HOM05D005276 ORTHO05D006813 1.5e-48 197.2 250 46.0
Medtr8g038070 Medicago truncatula HOM05D005276 ORTHO05D006813 2.7e-47 193.0 242 45.5
PGR102G3141 Punica granatum HOM05D005276 ORTHO05D006813 1.1e-45 187.6 254 42.9
Os04g0213100 Oryza sativa ssp. japonica HOM05D005276 ORTHO05D006813 5.3e-43 178.7 266 41.0
PGR102G1949 Punica granatum HOM05D005276 ORTHO05D006813 1.2e-42 177.6 245 44.1
Ca_08210_v3 Cicer arietinum L. HOM05D005276 ORTHO05D006813 2.6e-42 176.4 225 44.4
PGR102G1815 Punica granatum HOM05D005276 ORTHO05D006813 4.5e-42 175.6 242 41.7
VMungo0720G2128 Vigna mungo HOM05D005276 ORTHO05D006813 1.3e-41 174.1 249 42.2
TPR.G33522 Trifolium pratense HOM05D005276 ORTHO05D006813 2.9e-41 172.9 225 42.7
TPR.G33532 Trifolium pratense HOM05D005276 ORTHO05D006813 1.9e-40 170.2 225 42.2
Medtr0057s0100 Medicago truncatula HOM05D005276 ORTHO05D006813 1.6e-39 167.2 225 40.9
Psat0s1021g0280 Pisum sativum HOM05D005276 ORTHO05D006813 2.1e-39 166.8 225 41.8
EL10Ac3g05487 Beta vulgaris HOM05D005276 ORTHO05D006813 4.7e-39 165.6 151 54.3
Lj3g0023477 Lotus japonicus HOM05D005276 ORTHO05D006813 6.1e-39 165.2 124 62.1
Psat0s3494g0040 Pisum sativum HOM05D005276 ORTHO05D006813 6.1e-39 165.2 145 57.2
Psat1g110680 Pisum sativum HOM05D005276 ORTHO05D006813 6.1e-39 165.2 145 57.2
RcHm_v2.0_Chr5g0076491 Rosa chinensis HOM05D005276 ORTHO05D006813 8.0e-39 164.9 168 54.2
Medtr0057s0170 Medicago truncatula HOM05D005276 ORTHO05D006813 1.0e-38 164.5 225 40.4
Psat5g117800 Pisum sativum HOM05D005276 ORTHO05D006813 3.0e-38 162.9 225 41.8
Psat5g117840 Pisum sativum HOM05D005276 ORTHO05D006813 3.0e-38 162.9 225 41.8
Psat0s876g0040 Pisum sativum HOM05D005276 ORTHO05D006813 4.0e-38 162.5 226 41.2
Phvul.007G276000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.2e-37 161.0 248 39.5
Phvul.007G276500 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.2e-37 161.0 251 39.4
Psat0s876g0120 Pisum sativum HOM05D005276 ORTHO05D006813 2.0e-37 160.2 226 40.3
VMungo0720G2700 Vigna mungo HOM05D005276 ORTHO05D006813 5.7e-37 158.7 143 54.5
Ca_23693_v3 Cicer arietinum L. HOM05D005276 ORTHO05D006813 9.7e-37 157.9 144 55.6
Medtr7g103990 Medicago truncatula HOM05D005276 ORTHO05D006813 1.7e-36 157.1 142 57.7
EL10Ac1g01354 Beta vulgaris HOM05D005276 ORTHO05D006813 8.3e-36 154.8 147 50.3
EL10Ac1g01356 Beta vulgaris HOM05D005276 ORTHO05D006813 8.3e-36 154.8 147 50.3
EL10Ac1g01358 Beta vulgaris HOM05D005276 ORTHO05D006813 8.3e-36 154.8 147 50.3
Ah.02g117180 Amaranthus hybridus HOM05D005276 ORTHO05D006813 4.1e-35 152.5 147 52.4
VMungo0720G3131 Vigna mungo HOM05D005276 ORTHO05D006813 9.1e-35 151.4 144 54.9
EL10Ac4g09362 Beta vulgaris HOM05D005276 ORTHO05D006813 2.0e-34 150.2 253 39.1
AUR62014887 Chenopodium quinoa HOM05D005276 ORTHO05D006813 2.0e-34 150.2 151 49.7
AUR62016119 Chenopodium quinoa HOM05D005276 ORTHO05D006813 1.0e-33 147.9 147 51.7
VMungo0720G1899 Vigna mungo HOM05D005276 ORTHO05D006813 1.3e-33 147.5 143 51.0
EL10Ac1g01352 Beta vulgaris HOM05D005276 ORTHO05D006813 2.2e-33 146.7 225 37.8
Phvul.007G276200 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.2e-33 146.7 143 51.0
Phvul.007G277100 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 5.0e-33 145.6 143 52.4
Phvul.008G252000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 5.0e-33 145.6 143 53.1
Phvul.007G275900 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 8.5e-33 144.8 143 51.0
Phvul.007G276100 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 3.2e-32 142.9 143 50.3
Phvul.009G133400 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 3.2e-32 142.9 143 50.3
Phvul.007G275800 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 9.4e-32 141.4 144 52.1
PGR102G2116 Punica granatum HOM05D005276 ORTHO05D006813 2.7e-31 139.8 221 38.9
EL10Ac2g04799 Beta vulgaris HOM05D005276 ORTHO05D006813 4.7e-31 139.0 253 37.2
EL10Ac1g01355 Beta vulgaris HOM05D005276 ORTHO05D006813 1.4e-30 137.5 132 49.2
EL10Ac1g01357 Beta vulgaris HOM05D005276 ORTHO05D006813 1.4e-30 137.5 132 49.2
EL10Ac2g04798 Beta vulgaris HOM05D005276 ORTHO05D006813 1.4e-30 137.5 250 36.0
Phvul.007G277000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 4.0e-30 136.0 127 55.1
Phvul.007G276300 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 5.2e-30 135.6 143 49.0
Rhsim05G0197600 Rhododendron simsii HOM05D005276 ORTHO05D006813 8.8e-30 134.8 195 45.1
Medtr7g012000 Medicago truncatula HOM05D005276 ORTHO05D006813 1.5e-29 134.0 167 45.5
Medtr6g040290 Medicago truncatula HOM05D005276 ORTHO05D006813 2.0e-29 133.7 146 49.3
Ah.10g029400 Amaranthus hybridus HOM05D005276 ORTHO05D006813 3.4e-29 132.9 151 45.0
Phvul.007G275700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 5.7e-29 132.1 127 54.3
VMungo0720G2085 Vigna mungo HOM05D005276 ORTHO05D006813 9.8e-29 131.3 136 50.0
Ah.02g121010 Amaranthus hybridus HOM05D005276 ORTHO05D006813 2.2e-28 130.2 141 47.5
AUR62041391 Chenopodium quinoa HOM05D005276 ORTHO05D006813 2.2e-28 130.2 147 48.3
RcHm_v2.0_Chr5g0076341 Rosa chinensis HOM05D005276 ORTHO05D006813 6.3e-28 128.6 99 63.6
Hma1.2p1_0052F.1_g030770 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 1.4e-27 127.5 225 37.8
Hma1.2p1_0472F.1_g160029 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 1.4e-27 127.5 225 37.8
VMungo0720G1439 Vigna mungo HOM05D005276 ORTHO05D006813 6.6e-25 118.6 166 41.6
Rhsim10G0134200 Rhododendron simsii HOM05D005276 ORTHO05D006813 8.6e-25 118.2 145 45.5
vmacro13228 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 8.6e-25 118.2 142 47.2
Medtr6g073540 Medicago truncatula HOM05D005276 ORTHO05D006813 4.7e-23 112.5 149 43.6
RcHm_v2.0_Chr5g0076401 Rosa chinensis HOM05D005276 ORTHO05D006813 4.7e-23 112.5 148 45.9
Ca_03455_v3 Cicer arietinum L. HOM05D005276 ORTHO05D006813 8.0e-23 111.7 223 34.5
Dinv42431 Davidia involucrata HOM05D005276 ORTHO05D006813 1.0e-22 111.3 145 45.5
TPR.G33545 Trifolium pratense HOM05D005276 ORTHO05D006813 1.0e-22 111.3 146 41.1
RcHm_v2.0_Chr5g0076801 Rosa chinensis HOM05D005276 ORTHO05D006813 1.8e-22 110.5 155 43.9
Medtr6g045077 Medicago truncatula HOM05D005276 ORTHO05D006813 2.3e-22 110.2 146 37.7
EL10Ac1g02090 Beta vulgaris HOM05D005276 ORTHO05D006813 3.0e-22 109.8 145 41.4
Medtr6g072470 Medicago truncatula HOM05D005276 ORTHO05D006813 5.2e-22 109.0 149 43.0
RcHm_v2.0_Chr5g0076541 Rosa chinensis HOM05D005276 ORTHO05D006813 8.9e-22 108.2 75 65.3
EL10Ac1g02109 Beta vulgaris HOM05D005276 ORTHO05D006813 1.2e-21 107.8 145 41.4
Medtr6g048620 Medicago truncatula HOM05D005276 ORTHO05D006813 1.5e-21 107.5 153 38.6
EL10Ac1g02097 Beta vulgaris HOM05D005276 ORTHO05D006813 7.5e-21 105.1 148 40.5
Medtr1g066530 Medicago truncatula HOM05D005276 ORTHO05D006813 7.5e-21 105.1 143 39.9
Medtr6g048910 Medicago truncatula HOM05D005276 ORTHO05D006813 1.7e-20 104.0 146 37.7
Psat0s971g0080 Pisum sativum HOM05D005276 ORTHO05D006813 1.7e-20 104.0 143 41.3
TPR.G28516 Trifolium pratense HOM05D005276 ORTHO05D006813 4.9e-20 102.4 137 42.3
Lj6C375G5 Lonicera japonica HOM05D005276 ORTHO05D001431 5.4e-19 99.0 133 41.4
Medtr4g102470 Medicago truncatula HOM05D005276 ORTHO05D006813 7.0e-19 98.6 174 37.4
Phvul.007G263500 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.2e-18 97.8 146 38.4
Phvul.007G275600 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.2e-18 97.8 143 41.3
Phvul.007G263700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.0e-18 97.1 146 38.4
EL10Ac1g01353 Beta vulgaris HOM05D005276 ORTHO05D006813 4.5e-18 95.9 240 31.2
Medtr0216s0030 Medicago truncatula HOM05D005276 ORTHO05D006813 1.0e-17 94.7 132 38.6
AUR62016935 Chenopodium quinoa HOM05D005276 ORTHO05D006813 1.3e-17 94.4 176 35.8
Medtr6g049040 Medicago truncatula HOM05D005276 ORTHO05D006813 2.9e-17 93.2 127 41.7
AUR62024089 Chenopodium quinoa HOM05D005276 ORTHO05D006813 5.6e-16 89.0 138 37.0
Ah.16g101350 Amaranthus hybridus HOM05D005276 ORTHO05D038198 9.5e-16 88.2 162 37.0
Phvul.007G276401 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.6e-15 87.4 160 36.9
TPR.G10459 Trifolium pratense HOM05D005276 ORTHO05D006813 6.1e-15 85.5 145 33.1
AUR62037739 Chenopodium quinoa HOM05D005276 ORTHO05D038198 2.3e-14 83.6 162 35.8
EL10Ac1g02098 Beta vulgaris HOM05D005276 ORTHO05D006813 5.2e-14 82.4 83 44.6
Medtr0807s0020 Medicago truncatula HOM05D005276 ORTHO05D006813 6.8e-14 82.0 143 35.7
Phvul.007G264000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.3e-12 77.8 123 37.4
Lj6C426G9 Lonicera japonica HOM05D005276 ORTHO05D006813 1.7e-12 77.4 94 46.8
Dinv42430 Davidia involucrata HOM05D005276 ORTHO05D006813 2.2e-12 77.0 85 48.2
Phvul.002G268600 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.4e-11 73.6 146 36.3
Medtr6g048810 Medicago truncatula HOM05D005276 ORTHO05D006813 4.6e-10 69.3 89 43.8
vmacro23329 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 7.8e-10 68.6 186 29.6
Phvul.002G269700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.7e-09 67.4 100 42.0
TPR.G33511 Trifolium pratense HOM05D005276 ORTHO05D006813 6.6e-09 65.5 79 46.8
Medtr6g048880 Medicago truncatula HOM05D005276 ORTHO05D006813 4.3e-08 62.8 139 32.4
Phvul.007G276700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 3.6e-07 59.7 97 40.2


User provided reference genes

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