Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0004677 Camellia sinensis var. sinensis HOM05D006384 ORTHO05D007917 1.4e-81 306.2 154 100.0
CSS0019463 Camellia sinensis var. sinensis HOM05D006384 ORTHO05D007917 1.2e-72 276.6 167 88.0
Hma1.2p1_0205F.1_g087265 Hydrangea macrophylla HOM05D006384 ORTHO05D007917 3.4e-59 231.9 150 78.7
Rhsim03G0093600 Rhododendron simsii HOM05D006384 ORTHO05D007917 2.9e-58 228.8 143 79.0
CiPaw.10G132500 Carya illinoinensis HOM05D006384 ORTHO05D007917 6.3e-58 227.6 148 77.7
Cc06_g04070 Coffea canephora HOM05D006384 ORTHO05D007917 1.1e-57 226.9 149 74.5
Haze_20571 Corylus avellana HOM05D006384 ORTHO05D007917 1.4e-57 226.5 152 76.3
Nn2g11540 Nelumbo nucifera HOM05D006384 ORTHO05D007917 1.4e-57 226.5 142 76.8
QL07p044018 Quercus lobata HOM05D006384 ORTHO05D007917 1.4e-57 226.5 152 75.0
Sopen10g035590 Solanum pennellii HOM05D006384 ORTHO05D007917 1.2e-56 223.4 144 75.0
Dinv37301 Davidia involucrata HOM05D006384 ORTHO05D007917 1.6e-56 223.0 142 78.9
Nitab4.5_0000754g0290 Nicotiana tabacum HOM05D006384 ORTHO05D007917 1.6e-56 223.0 140 76.4
Nitab4.5_0002130g0050 Nicotiana tabacum HOM05D006384 ORTHO05D007917 1.6e-56 223.0 140 75.7
Solyc10g086210.2 Solanum lycopersicum HOM05D006384 ORTHO05D007917 2.7e-56 222.2 144 74.3
Cpa.g.c35130 Carica papaya HOM05D006384 ORTHO05D007917 1.0e-55 220.3 142 78.2
Peaxi162Scf00488g00042 Petunia axillaris HOM05D006384 ORTHO05D007917 1.0e-55 220.3 137 78.1
PGR004G0408 Punica granatum HOM05D006384 ORTHO05D007917 1.7e-55 219.5 141 76.6
Thecc.05G063500 Theobroma cacao HOM05D006384 ORTHO05D007917 2.3e-55 219.2 145 74.5
FvH4_6g16140 Fragaria vesca HOM05D006384 ORTHO05D007917 8.6e-55 217.2 138 78.3
Potri.006G126200 Populus trichocarpa HOM05D006384 ORTHO05D007917 8.6e-55 217.2 142 75.4
ECA248G2568 Erigeron canadensis HOM05D006384 ORTHO05D007917 1.1e-54 216.9 140 75.0
TAR623G0498 Trochodendron aralioides HOM05D001475 ORTHO05D001525 1.1e-54 216.9 144 74.3
CAN.G509.15 Capsicum annuum HOM05D006384 ORTHO05D007917 1.5e-54 216.5 147 71.4
Duzib093G1098 Durio zibethinus HOM05D006384 ORTHO05D007917 1.5e-54 216.5 145 73.8
FAN14G1974 Fragaria x ananassa HOM05D006384 ORTHO05D007917 2.5e-54 215.7 150 73.3
FAN14G4113 Fragaria x ananassa HOM05D006384 ORTHO05D007917 2.5e-54 215.7 150 73.3
Lj2A115T51 Lonicera japonica HOM05D006384 ORTHO05D007917 3.3e-54 215.3 148 69.6
MD12G1115500 Malus domestica HOM05D006384 ORTHO05D007917 3.3e-54 215.3 151 72.2
Atru.chr8.1840 Acer truncatum HOM05D006384 ORTHO05D007917 7.3e-54 214.2 139 74.8
Gohir.D04G111800 Gossypium hirsutum HOM05D006384 ORTHO05D007917 7.3e-54 214.2 145 72.4
Gorai.009G415700 Gossypium raimondii HOM05D006384 ORTHO05D007917 7.3e-54 214.2 145 72.4
Manes.09G064200 Manihot esculenta HOM05D006384 ORTHO05D007917 7.3e-54 214.2 145 72.4
SalBow5G1519 Salvia bowleyana HOM05D006384 ORTHO05D007917 1.2e-53 213.4 145 72.4
SalBow5G1643 Salvia bowleyana HOM05D006384 ORTHO05D007917 1.2e-53 213.4 145 72.4
TAR369G0955 Trochodendron aralioides HOM05D006384 ORTHO05D007917 1.2e-53 213.4 138 73.2
arahy.Tifrunner.gnm1.ann1.TG2889 Arachis hypogaea HOM05D006384 ORTHO05D007917 2.1e-53 212.6 145 74.5
TWI74G0201 Tripterygium wilfordii HOM05D006384 ORTHO05D007917 2.1e-53 212.6 153 70.6
THA.LOC104806487 Tarenaya hassleriana HOM05D006384 ORTHO05D007917 2.8e-53 212.2 150 72.7
GSVIVG01025711001 Vitis vinifera HOM05D006384 ORTHO05D007917 2.8e-53 212.2 140 72.1
arahy.Tifrunner.gnm1.ann1.FRB5VT Arachis hypogaea HOM05D006384 ORTHO05D007917 4.7e-53 211.5 145 74.5
Gohir.A04G072900 Gossypium hirsutum HOM05D006384 ORTHO05D007917 4.7e-53 211.5 145 71.7
COL.COLO4_26986 Corchorus olitorius HOM05D006384 ORTHO05D001525 8.0e-53 210.7 143 69.9
FAN09G1862 Fragaria x ananassa HOM05D006384 ORTHO05D007917 8.0e-53 210.7 152 70.4
HanXRQChr01g0027531 Helianthus annuus HOM05D006384 ORTHO05D007917 8.0e-53 210.7 151 68.2
Prupe.6G234600 Prunus persica HOM05D006384 ORTHO05D007917 8.0e-53 210.7 137 75.9
ATR0680G046 Amborella trichopoda HOM05D006384 ORTHO05D007917 1.4e-52 209.9 143 71.3
RcHm_v2.0_Chr3g0469981 Rosa chinensis HOM05D006384 ORTHO05D007917 1.8e-52 209.5 137 75.2
FAN02G0742 Fragaria x ananassa HOM05D006384 ORTHO05D007917 2.3e-52 209.1 152 70.4
Glyma.19G182800 Glycine max HOM05D006384 ORTHO05D007917 3.1e-52 208.8 141 70.9
Migut.L01690 Erythranthe guttata HOM05D006384 ORTHO05D007917 5.2e-52 208.0 145 71.7
Thhalv10016975m.g Eutrema salsugineum HOM05D006384 ORTHO05D007917 5.2e-52 208.0 152 68.4
Aa31LG5G22260 Aethionema arabicum HOM05D006384 ORTHO05D007917 1.5e-51 206.5 139 74.1
Carub.0004s1888 Capsella rubella HOM05D006384 ORTHO05D007917 1.5e-51 206.5 140 72.9
SGA_v2.0_scaffold452G51820 Striga asiatica HOM05D006384 ORTHO05D007917 1.5e-51 206.5 145 71.0
THA.LOC104823480 Tarenaya hassleriana HOM05D006384 ORTHO05D007917 1.5e-51 206.5 152 68.4
AT2G37020 Arabidopsis thaliana HOM05D006384 ORTHO05D007917 3.4e-51 205.3 140 72.9
MSTRG.10316 Avicennia marina HOM05D006384 ORTHO05D007917 3.4e-51 205.3 145 70.3
AUR62040461 Chenopodium quinoa HOM05D006384 ORTHO05D007917 3.4e-51 205.3 138 70.3
Sp4g19300 Schrenkiella parvula HOM05D006384 ORTHO05D007917 5.8e-51 204.5 140 71.4
BcaB01g03801 Brassica carinata HOM05D006384 ORTHO05D007917 7.5e-51 204.1 152 67.1
Lj1g0002515 Lotus japonicus HOM05D006384 ORTHO05D007917 9.8e-51 203.8 149 69.8
Ca_08852_v3 Cicer arietinum L. HOM05D006384 ORTHO05D007917 1.3e-50 203.4 142 69.0
AL4G33330 Arabidopsis lyrata HOM05D006384 ORTHO05D007917 1.7e-50 203.0 140 71.4
ClCG10G020230 Citrullus lanatus HOM05D006384 ORTHO05D007917 1.7e-50 203.0 152 68.4
CARHR131500 Cardamine hirsuta HOM05D006384 ORTHO05D007917 2.9e-50 202.2 140 70.7
unitig_0.g684 Utricularia gibba HOM05D006384 ORTHO05D007917 4.9e-50 201.4 145 67.6
BcaC01g05625 Brassica carinata HOM05D006384 ORTHO05D007917 8.3e-50 200.7 152 66.4
MELO3C009346.2 Cucumis melo HOM05D006384 ORTHO05D007917 8.3e-50 200.7 151 68.2
Lalb_Chr20g0112661 Lupinus albus HOM05D006384 ORTHO05D007917 8.3e-50 200.7 142 70.4
Eucgr.A01141 Eucalyptus grandis HOM05D006384 ORTHO05D007917 1.1e-49 200.3 142 69.7
CsaV3_3G035870 Cucumis sativus L. HOM05D006384 ORTHO05D007917 1.4e-49 199.9 143 69.2
A03p20380 Brassica napus HOM05D006384 ORTHO05D007917 5.4e-49 198.0 153 66.7
C03p23970 Brassica napus HOM05D006384 ORTHO05D007917 5.4e-49 198.0 153 66.7
BraA03t11282Z Brassica rapa HOM05D006384 ORTHO05D007917 5.4e-49 198.0 153 66.7
CSS0039092 Camellia sinensis var. sinensis HOM05D006384 ORTHO05D007917 5.4e-49 198.0 110 86.4
Oeu016975.2 Olea europaea HOM05D006384 ORTHO05D007917 7.0e-49 197.6 155 63.9
PSO801G0099 Papaver somniferum HOM05D006384 ORTHO05D007917 7.0e-49 197.6 140 68.6
Ah.15g092420 Amaranthus hybridus HOM05D006384 ORTHO05D007917 1.2e-48 196.8 152 61.8
BolC3t14788H Brassica oleracea HOM05D006384 ORTHO05D007917 2.0e-48 196.1 153 66.0
TPR.G9375 Trifolium pratense HOM05D006384 ORTHO05D007917 2.0e-48 196.1 141 67.4
Lsat_1_v5_gn_1_52961 Lactuca sativa HOM05D006384 ORTHO05D007917 4.6e-48 194.9 140 69.3
PSO339G6114 Papaver somniferum HOM05D006384 ORTHO05D007917 6.0e-48 194.5 140 67.9
DCAR_009302 Daucus carota HOM05D006384 ORTHO05D007917 1.0e-47 193.7 137 67.9
CDE06G0314 Ceratophyllum demersum HOM05D006384 ORTHO05D007917 1.3e-47 193.4 137 66.4
Sc20g0005270 Simmondsia chinensis HOM05D006384 ORTHO05D007917 1.3e-47 193.4 137 69.3
Os10g0443200 Oryza sativa ssp. japonica HOM05D006384 ORTHO05D007917 1.7e-47 193.0 141 63.8
Phvul.001G178300 Phaseolus vulgaris HOM05D006384 ORTHO05D007917 6.6e-47 191.0 141 67.4
Psat3g043320 Pisum sativum HOM05D006384 ORTHO05D007917 8.6e-47 190.7 139 66.9
VMungo1383G1856 Vigna mungo HOM05D006384 ORTHO05D007917 8.6e-47 190.7 141 68.1
HPP92_025998 Vanilla planifolia HOM05D006384 ORTHO05D007917 2.5e-46 189.1 148 62.8
Aqoxy2G01819 Aquilegia oxysepala HOM05D006384 ORTHO05D007917 2.1e-45 186.0 146 64.4
Ciclev10013845m.g Citrus clementina HOM05D006384 ORTHO05D007917 6.2e-45 184.5 123 72.4
Hund20279 Selenicereus undatus HOM05D006384 ORTHO05D007917 1.4e-44 183.3 168 57.1
Medtr7g101760 Medicago truncatula HOM05D006384 ORTHO05D007917 3.1e-44 182.2 142 64.1
Actinidia40017 Actinidia chinensis HOM05D006384 ORTHO05D007917 5.2e-44 181.4 153 66.7
Sed0012269 Sechium edule HOM05D006384 ORTHO05D007917 2.6e-43 179.1 140 65.0
VMungo1383G2663 Vigna mungo HOM05D006384 ORTHO05D007917 7.5e-43 177.6 141 63.8
CANSAT80G0575 Cannabis sativa HOM05D006384 ORTHO05D007917 9.8e-43 177.2 126 71.4
AUR62041978 Chenopodium quinoa HOM05D006384 ORTHO05D007917 9.8e-43 177.2 134 67.2
EL10Ac7g16562 Beta vulgaris HOM05D006384 ORTHO05D007917 6.6e-39 164.5 148 56.8
SEGI_26624 Sequoiadendron giganteum HOM05D006384 ORTHO05D007917 9.5e-38 160.6 143 53.1
Mapoly0009s0045 Marchantia polymorpha HOM05D006384 ORTHO05D007917 1.1e-30 137.1 138 48.6
Sc20g0001670 Simmondsia chinensis HOM05D006384 ORTHO05D007917 1.2e-27 127.1 122 51.6
AagrBONN_evm.TU.Sc2ySwM_117.2066 Anthoceros agrestis HOM05D006384 ORTHO05D007917 4.4e-27 125.2 139 43.2
SMO197G0035 Selaginella moellendorffii HOM05D006384 ORTHO05D007917 1.7e-26 123.2 135 41.5
CBR_g30715 Chara braunii HOM05D001230 ORTHO05D007917 1.1e-25 120.6 137 41.6
CBR_g45408 Chara braunii HOM05D006384 ORTHO05D007917 2.1e-24 116.3 154 39.0
Glyma.03G182200 Glycine max HOM05D006384 ORTHO05D007917 6.2e-21 104.8 96 59.4
Zm00001eb222550 Zea mays HOM05D006384 ORTHO05D007917 5.4e-17 91.7 90 53.3
vmacro07280 Vaccinium macrocarpon HOM05D006384 ORTHO05D007917 1.7e-10 70.1 37 81.1
Cpa.g.sc2150.3 Carica papaya HOM05D006384 ORTHO05D007917 3.8e-10 68.9 55 70.9
DCAR_017395 Daucus carota HOM05D006384 ORTHO05D007917 4.2e-09 65.5 42 64.3
TAR374G1213 Trochodendron aralioides HOM05D000928 ORTHO05D000023 1.0e-07 60.8 48 54.2
RcHm_v2.0_Chr4g0411411 Rosa chinensis HOM05D006384 ORTHO05D007917 8.7e-07 57.8 48 64.6
MELO3C032679.2 Cucumis melo HOM05D006384 ORTHO05D007917 5.6e-06 55.1 59 55.9


User provided reference genes

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