Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0004673 Camellia sinensis var. sinensis HOM05D016297 ORTHO05D110129 9.9e-61 236.5 112 100.0
CSS0009725 Camellia sinensis var. sinensis HOM05D016297 ORTHO05D112881 4.3e-48 194.5 111 86.5
CSS0022451 Camellia sinensis var. sinensis HOM05D016297 ORTHO05D109420 1.2e-42 176.4 108 81.5
CSS0004850 Camellia sinensis var. sinensis HOM05D016297 ORTHO05D110813 2.2e-39 165.6 108 77.8
CSS0049972 Camellia sinensis var. sinensis HOM05D016297 ORTHO05D110748 3.2e-35 151.8 108 73.1
CSS0002883 Camellia sinensis var. sinensis HOM05D016297 ORTHO05D113081 6.7e-33 144.1 108 68.5
CSS0012379 Camellia sinensis var. sinensis HOM05D016297 ORTHO05D109788 8.2e-31 137.1 108 66.7
CSS0006669 Camellia sinensis var. sinensis HOM05D016297 ORTHO05D110459 2.6e-16 89.0 108 45.4
CSS0040480 Camellia sinensis var. sinensis HOM05D003718 ORTHO05D004402 1.0e-12 77.0 146 37.0
CSS0049010 Camellia sinensis var. sinensis HOM05D003718 ORTHO05D004402 1.0e-12 77.0 146 37.0
CSS0002408 Camellia sinensis var. sinensis HOM05D020919 ORTHO05D113319 2.6e-08 62.4 51 62.7
CSS0008263 Camellia sinensis var. sinensis HOM05D020919 ORTHO05D109032 2.6e-08 62.4 51 62.7
CSS0019155 Camellia sinensis var. sinensis HOM05D020919 ORTHO05D113160 3.4e-08 62.0 48 60.4
Dinv34637 Davidia involucrata HOM05D003718 ORTHO05D004402 4.4e-08 61.6 146 32.9
vmacro14814 Vaccinium macrocarpon HOM05D003718 ORTHO05D004402 3.7e-07 58.5 146 32.2
GSVIVG01028357001 Vitis vinifera HOM05D003718 ORTHO05D004402 3.7e-07 58.5 50 58.0
Actinidia09537 Actinidia chinensis HOM05D003718 ORTHO05D004402 4.8e-07 58.2 104 39.4
Hma1.2p1_0273F.1_g109540 Hydrangea macrophylla HOM05D003718 ORTHO05D004402 4.8e-07 58.2 146 31.5
Rhsim01G0262400 Rhododendron simsii HOM05D003718 ORTHO05D004402 6.3e-07 57.8 146 32.2
Actinidia07305 Actinidia chinensis HOM05D003718 ORTHO05D004402 1.1e-06 57.0 50 54.0
CiPaw.04G187700 Carya illinoinensis HOM05D003718 ORTHO05D004402 1.8e-06 56.2 146 30.1
Actinidia37517 Actinidia chinensis HOM05D003718 ORTHO05D004402 3.1e-06 55.5 146 30.1
Prupe.8G221600 Prunus persica HOM05D003718 ORTHO05D004402 3.1e-06 55.5 54 50.0
CSS0045498 Camellia sinensis var. sinensis HOM05D020919 ORTHO05D113452 4.1e-06 55.1 69 44.9
MD10G1181500 Malus domestica HOM05D003718 ORTHO05D004402 4.1e-06 55.1 72 40.3
QL09p039591 Quercus lobata HOM05D003718 ORTHO05D004402 4.1e-06 55.1 145 31.0
Sopen05g027610 Solanum pennellii HOM05D003718 ORTHO05D004402 5.4e-06 54.7 146 28.1
Hma1.2p1_0576F.1_g181950 Hydrangea macrophylla HOM05D003718 ORTHO05D004402 7.0e-06 54.3 122 35.2
Thecc.01G255900 Theobroma cacao HOM05D003718 ORTHO05D004402 7.0e-06 54.3 50 52.0
TAR633G0796 Trochodendron aralioides HOM05D003718 ORTHO05D004402 7.0e-06 54.3 147 28.6
Cfa013046 Carpinus fangiana HOM05D003718 ORTHO05D004402 9.1e-06 53.9 145 30.3
TAR362G0778 Trochodendron aralioides HOM05D003718 ORTHO05D004402 9.1e-06 53.9 146 29.5


User provided reference genes

Program Settings