Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0004656 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 4.6e-65 251.1 131 100.0
CSS0008280 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 7.5e-60 233.8 131 94.7
CSS0048436 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 7.1e-58 227.3 131 90.8
CSS0039010 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 1.1e-55 219.9 129 89.9
CSS0046654 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 4.3e-55 218.0 131 88.5
CSS0015628 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 9.5e-55 216.9 130 88.5
CSS0008104 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 5.2e-53 211.1 131 85.5
CSS0030227 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 5.8e-52 207.6 131 86.3
CSS0025185 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 7.6e-52 207.2 131 86.3
CSS0022599 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 7.8e-49 197.2 131 84.0
GSVIVG01010138001 Vitis vinifera HOM05D008138 ORTHO05D010043 6.9e-13 77.8 94 50.0
Cpa.g.sc53.120 Carica papaya HOM05D008138 ORTHO05D010043 2.0e-12 76.3 98 39.8
Sed0002378 Sechium edule HOM05D008138 ORTHO05D010043 5.9e-12 74.7 109 42.2
Lj2g0015438 Lotus japonicus HOM05D008138 ORTHO05D010043 2.2e-11 72.8 94 44.7
ClCG05G023400 Citrullus lanatus HOM05D008138 ORTHO05D010043 3.8e-11 72.0 103 41.7
Thecc.02G319500 Theobroma cacao HOM05D008138 ORTHO05D010043 6.5e-11 71.2 102 38.2
GSVIVG01010131001 Vitis vinifera HOM05D008138 ORTHO05D010043 8.4e-11 70.9 104 41.3
Glyma.01G069000 Glycine max HOM05D008138 ORTHO05D010043 1.9e-10 69.7 93 39.8
RhsimUnG0062800 Rhododendron simsii HOM05D009462 ORTHO05D013623 3.2e-10 68.9 77 46.8
TAR629G0219 Trochodendron aralioides HOM05D008138 ORTHO05D010043 5.5e-10 68.2 113 36.3
Potri.013G126000 Populus trichocarpa HOM05D008138 ORTHO05D010043 9.3e-10 67.4 99 44.4
Glyma.02G125900 Glycine max HOM05D008138 ORTHO05D010043 1.6e-09 66.6 93 37.6
RhsimUnG0060000 Rhododendron simsii HOM05D009462 ORTHO05D013623 2.1e-09 66.2 73 47.9
TPR.G2576 Trifolium pratense HOM05D008138 ORTHO05D010043 2.1e-09 66.2 94 40.4
Nn4g23585 Nelumbo nucifera HOM05D008138 ORTHO05D010043 4.6e-09 65.1 97 36.1
RhsimUnG0090300 Rhododendron simsii HOM05D009462 ORTHO05D013623 6.1e-09 64.7 128 35.9
ClCG01G007380 Citrullus lanatus HOM05D022360 ORTHO05D010043 7.9e-09 64.3 108 38.9
Nn3g17583 Nelumbo nucifera HOM05D008138 ORTHO05D010043 7.9e-09 64.3 104 32.7
Manes.04G036300 Manihot esculenta HOM05D008138 ORTHO05D010043 1.0e-08 63.9 98 36.7
RhsimUnG0090100 Rhododendron simsii HOM05D009462 ORTHO05D013623 1.0e-08 63.9 80 42.5
Eucgr.G01572 Eucalyptus grandis HOM05D008138 ORTHO05D010043 1.3e-08 63.5 102 37.3
Sed0011337 Sechium edule HOM05D022360 ORTHO05D010043 1.3e-08 63.5 103 41.7
Eucgr.G02403 Eucalyptus grandis HOM05D008138 ORTHO05D010043 1.8e-08 63.2 102 37.3
Ciclev10022615m.g Citrus clementina HOM05D017113 ORTHO05D019028 2.3e-08 62.8 128 32.8
Cpa.g.sc9.360 Carica papaya HOM05D008138 ORTHO05D010043 3.0e-08 62.4 89 37.1
QL10p055344 Quercus lobata HOM05D008138 ORTHO05D010043 3.0e-08 62.4 98 33.7
RhsimUnG0201400 Rhododendron simsii HOM05D009462 ORTHO05D013623 3.0e-08 62.4 123 35.8
CsaV3_5G018850 Cucumis sativus L. HOM05D022360 ORTHO05D034989 3.9e-08 62.0 97 43.3
RhsimUnG0175000 Rhododendron simsii HOM05D009462 ORTHO05D013623 3.9e-08 62.0 99 38.4
TAR629G0644 Trochodendron aralioides HOM05D008138 ORTHO05D010043 5.1e-08 61.6 97 36.1
Ciclev10022611m.g Citrus clementina HOM05D017113 ORTHO05D019028 6.7e-08 61.2 128 32.8
RhsimUnG0201100 Rhododendron simsii HOM05D009462 ORTHO05D013623 6.7e-08 61.2 84 40.5
RhsimUnG0204000 Rhododendron simsii HOM05D009462 ORTHO05D013623 6.7e-08 61.2 75 45.3
Manes.04G036500 Manihot esculenta HOM05D008138 ORTHO05D010043 1.1e-07 60.5 85 38.8
Eucgr.G01398 Eucalyptus grandis HOM05D008138 ORTHO05D010043 1.9e-07 59.7 98 35.7
RhsimUnG0203600 Rhododendron simsii HOM05D009462 ORTHO05D013623 5.7e-07 58.2 113 36.3
Ciclev10022667m.g Citrus clementina HOM05D017113 ORTHO05D019028 7.4e-07 57.8 112 34.8
Eucgr.B03099 Eucalyptus grandis HOM05D008138 ORTHO05D010043 9.7e-07 57.4 97 38.1
QL10p055339 Quercus lobata HOM05D008138 ORTHO05D010043 9.7e-07 57.4 99 33.3
Rhsim09G0118100 Rhododendron simsii HOM05D008138 ORTHO05D010043 9.7e-07 57.4 103 37.9
RhsimUnG0222200 Rhododendron simsii HOM05D009462 ORTHO05D013623 9.7e-07 57.4 114 36.8
CsaV3_5G033610 Cucumis sativus L. HOM05D008138 ORTHO05D010043 1.6e-06 56.6 92 41.3
Nn1g02864 Nelumbo nucifera HOM05D008138 ORTHO05D010043 1.6e-06 56.6 93 37.6
RhsimUnG0060400 Rhododendron simsii HOM05D009462 ORTHO05D013623 1.6e-06 56.6 120 34.2
RhsimUnG0216100 Rhododendron simsii HOM05D009462 ORTHO05D013623 1.6e-06 56.6 125 32.8
RhsimUnG0216000 Rhododendron simsii HOM05D009462 ORTHO05D013623 2.8e-06 55.8 119 37.0
Dinv01548 Davidia involucrata HOM05D008138 ORTHO05D010043 4.8e-06 55.1 96 36.5
CSS0022846 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 6.3e-06 54.7 98 34.7
Prupe.1G297700 Prunus persica HOM05D008138 ORTHO05D010043 6.3e-06 54.7 97 35.1
Ciclev10022666m.g Citrus clementina HOM05D017113 ORTHO05D019028 8.2e-06 54.3 110 35.5


User provided reference genes

Program Settings