Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0004646 Camellia sinensis var. sinensis HOM05D000039 ORTHO05D109586 3.4e-46 188.3 123 100.0
CSS0011664 Camellia sinensis var. sinensis HOM05D000039 ORTHO05D000370 2.6e-14 82.4 124 46.0
Actinidia24223 Actinidia chinensis HOM05D000039 ORTHO05D000370 5.9e-14 81.3 123 42.3
CSS0042746 Camellia sinensis var. sinensis HOM05D000039 ORTHO05D043300 2.5e-12 75.9 123 40.7
Oeu035568.1 Olea europaea HOM05D000039 ORTHO05D000370 3.6e-11 72.0 51 68.6
Oeu031470.1 Olea europaea HOM05D000039 ORTHO05D000370 3.0e-10 68.9 62 58.1
Cc01_g08960 Coffea canephora HOM05D000039 ORTHO05D000370 3.3e-09 65.5 122 36.1
Eucgr.B03838 Eucalyptus grandis HOM05D000039 ORTHO05D000370 3.7e-08 62.0 50 60.0
CSS0041889 Camellia sinensis var. sinensis HOM05D000039 ORTHO05D000370 6.3e-08 61.2 122 39.3
Manes.06G129000 Manihot esculenta HOM05D000039 ORTHO05D000370 1.8e-07 59.7 51 56.9
Eucgr.B03840 Eucalyptus grandis HOM05D000039 ORTHO05D000370 2.4e-07 59.3 49 61.2
HanXRQChr02g0054351 Helianthus annuus HOM05D000039 ORTHO05D000370 2.4e-07 59.3 123 33.3
Ciclev10030190m.g Citrus clementina HOM05D000039 ORTHO05D000370 4.1e-07 58.5 123 35.0
TAR636G1089 Trochodendron aralioides HOM05D000039 ORTHO05D000370 4.1e-07 58.5 50 62.0
Nn6g33692 Nelumbo nucifera HOM05D000039 ORTHO05D000370 9.1e-07 57.4 50 58.0
Potri.015G110200 Populus trichocarpa HOM05D000039 ORTHO05D000370 1.2e-06 57.0 50 58.0
RcHm_v2.0_Chr5g0046861 Rosa chinensis HOM05D000039 ORTHO05D000370 1.2e-06 57.0 121 32.2
SalBow6G1075 Salvia bowleyana HOM05D000039 ORTHO05D000370 1.2e-06 57.0 36 75.0
Potri.001G218450 Populus trichocarpa HOM05D000039 ORTHO05D000370 1.5e-06 56.6 120 35.8
Potri.001G218500 Populus trichocarpa HOM05D000039 ORTHO05D000370 1.5e-06 56.6 120 35.8
ATR0665G188 Amborella trichopoda HOM05D000039 ORTHO05D000370 2.0e-06 56.2 54 51.9
PGR102G2942 Punica granatum HOM05D000039 ORTHO05D000370 2.6e-06 55.8 51 51.0
PGR102G2954 Punica granatum HOM05D000039 ORTHO05D000370 2.6e-06 55.8 50 56.0
Sabra15G0132300 Salix brachista HOM05D000039 ORTHO05D000370 2.6e-06 55.8 50 56.0
Ah.08g215630 Amaranthus hybridus HOM05D000039 ORTHO05D000370 3.4e-06 55.5 57 47.4
CsaV3_1G014970 Cucumis sativus L. HOM05D000039 ORTHO05D000370 4.5e-06 55.1 50 52.0
CsaV3_1G015890 Cucumis sativus L. HOM05D000039 ORTHO05D000370 4.5e-06 55.1 50 52.0
TWI79G0761 Tripterygium wilfordii HOM05D000039 ORTHO05D000370 4.5e-06 55.1 123 32.5
TAR636G1010 Trochodendron aralioides HOM05D000039 ORTHO05D000370 4.5e-06 55.1 49 59.2
Lsat_1_v5_gn_6_39000 Lactuca sativa HOM05D000039 ORTHO05D000370 5.9e-06 54.7 57 52.6
Lj1A235T72 Lonicera japonica HOM05D000039 ORTHO05D000370 5.9e-06 54.7 124 31.5
TAR374G1740 Trochodendron aralioides HOM05D000039 ORTHO05D000370 5.9e-06 54.7 49 57.1


User provided reference genes

Program Settings