Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0004641 Camellia sinensis var. sinensis HOM05D004942 ORTHO05D005687 3.0e-162 575.1 284 100.0
Rhsim09G0125700 Rhododendron simsii HOM05D004942 ORTHO05D005687 4.0e-50 202.6 156 64.7
vmacro10440 Vaccinium macrocarpon HOM05D004942 ORTHO05D005687 1.7e-48 197.2 187 56.1
Hma1.2p1_2519F.1_g323790 Hydrangea macrophylla HOM05D004942 ORTHO05D005687 1.3e-40 171.0 161 55.9
Manes.01G026200 Manihot esculenta HOM05D004942 ORTHO05D005687 2.3e-37 160.2 186 50.5
GSVIVG01012245001 Vitis vinifera HOM05D004942 ORTHO05D005687 4.3e-36 156.0 188 46.8
CiPaw.06G093500 Carya illinoinensis HOM05D004942 ORTHO05D005687 1.4e-34 151.0 176 45.5
Cfa008858 Carpinus fangiana HOM05D004942 ORTHO05D005687 1.8e-34 150.6 177 46.3
Lj3A1029T37 Lonicera japonica HOM05D004942 ORTHO05D005687 2.4e-34 150.2 214 45.3
Sabra08G0073900 Salix brachista HOM05D004942 ORTHO05D005687 4.1e-34 149.4 173 49.1
Haze_11879 Corylus avellana HOM05D004942 ORTHO05D005687 6.9e-34 148.7 177 45.8
QL03p073561 Quercus lobata HOM05D004942 ORTHO05D005687 6.9e-34 148.7 176 46.6
Potri.008G097700 Populus trichocarpa HOM05D004942 ORTHO05D005687 2.0e-33 147.1 173 48.0
CANSAT64G2200 Cannabis sativa HOM05D004942 ORTHO05D005687 4.5e-33 146.0 176 42.6
TWI79G0892 Tripterygium wilfordii HOM05D004942 ORTHO05D005687 3.2e-31 139.8 174 46.0
Actinidia28654 Actinidia chinensis HOM05D004942 ORTHO05D005687 4.2e-31 139.4 154 49.4
Ciclev10033741m.g Citrus clementina HOM05D004942 ORTHO05D005687 5.5e-31 139.0 157 51.0
GSVIVG01026037001 Vitis vinifera HOM05D004942 ORTHO05D005687 9.3e-31 138.3 148 50.0
Duzib251G0048 Durio zibethinus HOM05D004942 ORTHO05D005687 1.0e-29 134.8 158 49.4
FAN07G2875 Fragaria x ananassa HOM05D004942 ORTHO05D005687 5.1e-29 132.5 176 45.5
MBI16_g47660_MAGBIO Magnolia biondii HOM05D004942 ORTHO05D005687 3.3e-28 129.8 165 43.0
FAN12G1725 Fragaria x ananassa HOM05D004942 ORTHO05D005687 9.7e-28 128.3 199 43.2
COL.COLO4_27850 Corchorus olitorius HOM05D004942 ORTHO05D005687 1.6e-27 127.5 162 48.1
Thecc.02G326800 Theobroma cacao HOM05D004942 ORTHO05D005687 1.6e-27 127.5 158 48.1
FvH4_4g29660 Fragaria vesca HOM05D004942 ORTHO05D005687 2.2e-27 127.1 199 43.2
Prupe.1G290000 Prunus persica HOM05D004942 ORTHO05D005687 8.2e-27 125.2 201 38.8
Nn3g17507 Nelumbo nucifera HOM05D004942 ORTHO05D005687 2.4e-26 123.6 174 40.8
Nitab4.5_0000027g0020 Nicotiana tabacum HOM05D004942 ORTHO05D005687 4.1e-26 122.9 176 41.5
RcHm_v2.0_Chr4g0437911 Rosa chinensis HOM05D004942 ORTHO05D005687 4.1e-26 122.9 177 45.2
Cpa.g.sc1669.1 Carica papaya HOM05D004942 ORTHO05D005687 5.3e-26 122.5 177 42.9
FAN22G2425 Fragaria x ananassa HOM05D004942 ORTHO05D005687 9.0e-26 121.7 176 43.8
Sopen05g006850 Solanum pennellii HOM05D004942 ORTHO05D005687 1.5e-25 120.9 173 42.8
AT1G26330 Arabidopsis thaliana HOM05D004942 ORTHO05D005687 2.6e-25 120.2 170 42.9
Solyc05g012060.4 Solanum lycopersicum HOM05D004942 ORTHO05D005687 4.5e-25 119.4 173 41.6
Cc11_g11760 Coffea canephora HOM05D004942 ORTHO05D005687 5.9e-25 119.0 174 40.2
Migut.L01173 Erythranthe guttata HOM05D004942 ORTHO05D005687 5.9e-25 119.0 170 40.0
Nitab4.5_0003545g0010 Nicotiana tabacum HOM05D004942 ORTHO05D005687 5.9e-25 119.0 177 41.2
Oeu020362.1 Olea europaea HOM05D004942 ORTHO05D005687 5.9e-25 119.0 155 40.0
AL1G39420 Arabidopsis lyrata HOM05D004942 ORTHO05D005687 1.0e-24 118.2 170 42.4
AUR62003077 Chenopodium quinoa HOM05D004942 ORTHO05D005687 1.3e-24 117.9 161 41.6
SGA_v2.0_scaffold16G07813 Striga asiatica HOM05D004942 ORTHO05D005687 1.3e-24 117.9 169 39.6
MD16G1059100 Malus domestica HOM05D004942 ORTHO05D005687 1.7e-24 117.5 169 40.8
Aqoxy3G00534 Aquilegia oxysepala HOM05D004942 ORTHO05D005687 2.9e-24 116.7 225 34.7
THA.LOC104822000 Tarenaya hassleriana HOM05D004942 ORTHO05D005687 2.9e-24 116.7 171 41.5
Peaxi162Scf00175g00531 Petunia axillaris HOM05D004942 ORTHO05D005687 3.8e-24 116.3 173 39.3
CARHR025590 Cardamine hirsuta HOM05D004942 ORTHO05D005687 1.4e-23 114.4 182 39.0
AUR62007894 Chenopodium quinoa HOM05D004942 ORTHO05D005687 1.4e-23 114.4 161 40.4
Gohir.D12G163200 Gossypium hirsutum HOM05D004942 ORTHO05D005687 1.4e-23 114.4 170 41.8
Thhalv10006590m.g Eutrema salsugineum HOM05D004942 ORTHO05D005687 1.9e-23 114.0 170 41.8
Gorai.008G175800 Gossypium raimondii HOM05D004942 ORTHO05D005687 2.5e-23 113.6 170 41.2
Aqoxy4G01534 Aquilegia oxysepala HOM05D004942 ORTHO05D005687 4.2e-23 112.8 175 37.7
Gohir.A12G159900 Gossypium hirsutum HOM05D004942 ORTHO05D005687 4.2e-23 112.8 170 41.8
EL10Ac6g15023 Beta vulgaris HOM05D004942 ORTHO05D005687 7.2e-23 112.1 152 43.4
ClCG05G022730 Citrullus lanatus HOM05D004942 ORTHO05D005687 7.2e-23 112.1 164 40.9
Phvul.003G282800 Phaseolus vulgaris HOM05D004942 ORTHO05D005687 7.2e-23 112.1 182 37.9
C05p24600 Brassica napus HOM05D004942 ORTHO05D005687 1.6e-22 110.9 158 42.4
BolC5t31196H Brassica oleracea HOM05D004942 ORTHO05D005687 1.6e-22 110.9 158 42.4
BcaC05g26421 Brassica carinata HOM05D004942 ORTHO05D005687 2.7e-22 110.2 158 42.4
BcaC05g26635 Brassica carinata HOM05D004942 ORTHO05D005687 4.6e-22 109.4 170 40.0
PGR031G3471 Punica granatum HOM05D004942 ORTHO05D005687 6.1e-22 109.0 162 41.4
A09p39800 Brassica napus HOM05D004942 ORTHO05D005687 7.9e-22 108.6 158 41.1
Carub.0001s2467 Capsella rubella HOM05D004942 ORTHO05D005687 1.0e-21 108.2 170 40.0
MELO3C012244.2 Cucumis melo HOM05D004942 ORTHO05D005687 1.0e-21 108.2 162 41.4
BraA09t39480Z Brassica rapa HOM05D004942 ORTHO05D005687 3.0e-21 106.7 158 41.8
Sp1g22360 Schrenkiella parvula HOM05D004942 ORTHO05D005687 3.9e-21 106.3 170 38.8
Sed0022979 Sechium edule HOM05D004942 ORTHO05D005687 3.9e-21 106.3 167 40.1
Hund25161 Selenicereus undatus HOM05D004942 ORTHO05D005687 5.1e-21 105.9 167 36.5
MBI16_g37883_MAGBIO Magnolia biondii HOM05D004942 ORTHO05D005687 8.8e-21 105.1 144 40.3
Sc04g0007460 Simmondsia chinensis HOM05D004942 ORTHO05D005687 8.8e-21 105.1 162 36.4
PSO478G0521 Papaver somniferum HOM05D004942 ORTHO05D005687 1.5e-20 104.4 153 39.9
Aa31LG7G8720 Aethionema arabicum HOM05D004942 ORTHO05D005687 2.0e-20 104.0 118 49.2
PSO017G2640 Papaver somniferum HOM05D004942 ORTHO05D005687 2.0e-20 104.0 153 39.2
HanXRQChr17g0568411 Helianthus annuus HOM05D004942 ORTHO05D005687 5.7e-20 102.4 175 36.0
Zm00001eb095700 Zea mays HOM05D004942 ORTHO05D005687 5.7e-20 102.4 177 33.9
HPP92_000888 Vanilla planifolia HOM05D004942 ORTHO05D005687 9.7e-20 101.7 150 40.0
Lalb_Chr09g0334721 Lupinus albus HOM05D004942 ORTHO05D005687 1.3e-19 101.3 169 37.3
Glyma.16G091700 Glycine max HOM05D004942 ORTHO05D005687 3.7e-19 99.8 166 39.2
VMungo0251G2230 Vigna mungo HOM05D004942 ORTHO05D005687 6.3e-19 99.0 183 35.5
SalBow2G1731 Salvia bowleyana HOM05D004942 ORTHO05D005687 6.9e-18 95.5 157 37.6
Medtr8g066290 Medicago truncatula HOM05D004942 ORTHO05D005687 1.3e-16 91.3 176 33.0
Ah.03g138750 Amaranthus hybridus HOM05D004942 ORTHO05D005687 6.5e-16 89.0 154 37.7
TPR.G3371 Trifolium pratense HOM05D004942 ORTHO05D005687 6.5e-16 89.0 194 34.5
Psat1g014920 Pisum sativum HOM05D004942 ORTHO05D005687 8.5e-16 88.6 169 33.7
Hma1.2p1_0566F.1_g179990 Hydrangea macrophylla HOM05D004942 ORTHO05D005687 1.1e-15 88.2 96 46.9
Os09g0101800 Oryza sativa ssp. japonica HOM05D004942 ORTHO05D005687 1.1e-15 88.2 160 36.9
ATR0827G101 Amborella trichopoda HOM05D004942 ORTHO05D005687 5.5e-15 85.9 178 35.4
Lj4g0014066 Lotus japonicus HOM05D004942 ORTHO05D005687 7.2e-15 85.5 166 36.1
Psat4g122040 Pisum sativum HOM05D004942 ORTHO05D005687 7.2e-15 85.5 166 34.3
ECA234G0983 Erigeron canadensis HOM05D004942 ORTHO05D005687 9.4e-15 85.1 190 30.0
unitig_26.g10284 Utricularia gibba HOM05D004942 ORTHO05D005687 2.3e-13 80.5 154 36.4
GSVIVG01037061001 Vitis vinifera HOM05D004942 ORTHO05D005687 2.3e-13 80.5 63 68.3
GSVIVG01015130001 Vitis vinifera HOM05D004942 ORTHO05D005687 3.0e-13 80.1 63 68.3
Migut.A01205 Erythranthe guttata HOM05D004942 ORTHO05D005687 2.0e-12 77.4 169 32.0
CAN.G707.24 Capsicum annuum HOM05D004942 ORTHO05D005687 2.6e-12 77.0 121 37.2
GSVIVG01026043001 Vitis vinifera HOM05D004942 ORTHO05D005687 4.4e-12 76.3 84 54.8
Lsat_1_v5_gn_4_11720 Lactuca sativa HOM05D004942 ORTHO05D005687 8.2e-11 72.0 153 32.7
SHI10796 Sapria himalayana HOM05D004942 ORTHO05D005687 1.1e-10 71.6 118 36.4
Migut.A01186 Erythranthe guttata HOM05D004942 ORTHO05D005687 1.8e-10 70.9 169 29.6
TPR.G31932 Trifolium pratense HOM05D004942 ORTHO05D005687 5.3e-10 69.3 129 35.7
Aqoxy4G01498 Aquilegia oxysepala HOM05D004942 ORTHO05D005687 7.2e-07 58.9 76 44.7
SHI10795 Sapria himalayana HOM05D004942 ORTHO05D005687 4.7e-06 56.2 44 61.4


User provided reference genes

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