Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0004616 Camellia sinensis var. sinensis HOM05D007804 ORTHO05D009828 5.4e-85 317.8 179 100.0
Actinidia02723 Actinidia chinensis HOM05D007804 ORTHO05D009828 4.7e-28 128.6 170 57.6
Rhsim08G0063700 Rhododendron simsii HOM05D007804 ORTHO05D009828 8.2e-25 117.9 167 53.3
Nitab4.5_0002265g0080 Nicotiana tabacum HOM05D007804 ORTHO05D009828 3.4e-18 95.9 190 42.6
Nitab4.5_0001239g0070 Nicotiana tabacum HOM05D007804 ORTHO05D009828 1.3e-17 94.0 199 40.7
Oeu017303.1 Olea europaea HOM05D007804 ORTHO05D009828 2.2e-17 93.2 163 43.6
Sopen02g032190 Solanum pennellii HOM05D007804 ORTHO05D009828 3.7e-17 92.4 187 42.2
Oeu027756.1 Olea europaea HOM05D007804 ORTHO05D009828 4.8e-17 92.0 153 47.1
Peaxi162Scf00129g00628 Petunia axillaris HOM05D007804 ORTHO05D009828 4.8e-17 92.0 184 39.7
Cfa007487 Carpinus fangiana HOM05D007804 ORTHO05D009828 1.4e-16 90.5 184 38.6
Prupe.3G275600 Prunus persica HOM05D007804 ORTHO05D009828 1.4e-16 90.5 174 40.8
Migut.K01348 Erythranthe guttata HOM05D007804 ORTHO05D009828 2.4e-16 89.7 158 44.9
PGSC0003DMG402001401 Solanum tuberosum HOM05D007804 ORTHO05D009828 4.1e-16 89.0 195 37.9
Solyc02g087440.4 Solanum lycopersicum HOM05D007804 ORTHO05D009828 1.6e-15 87.0 187 40.1
MSTRG.23968 Avicennia marina HOM05D007804 ORTHO05D009828 5.9e-15 85.1 160 42.5
SGA_v2.0_scaffold135G34801 Striga asiatica HOM05D007804 ORTHO05D009828 5.9e-15 85.1 160 41.2
CiPaw.03G032600 Carya illinoinensis HOM05D007804 ORTHO05D009828 1.0e-14 84.3 165 40.6
Cpa.g.sc14.66 Carica papaya HOM05D007804 ORTHO05D009828 3.8e-14 82.4 161 40.4
Glyma.19G017000 Glycine max HOM05D007804 ORTHO05D009828 6.5e-14 81.6 169 45.0
COL.COLO4_36996 Corchorus olitorius HOM05D007804 ORTHO05D009828 8.5e-14 81.3 142 42.3
Gohir.A09G023300 Gossypium hirsutum HOM05D007804 ORTHO05D009828 8.5e-14 81.3 170 47.6
QL02p079311 Quercus lobata HOM05D007804 ORTHO05D009828 1.1e-13 80.9 172 41.3
Ciclev10012771m.g Citrus clementina HOM05D007804 ORTHO05D009828 1.5e-13 80.5 172 40.1
Migut.H00872 Erythranthe guttata HOM05D007804 ORTHO05D009828 1.9e-13 80.1 173 42.8
CAN.G206.83 Capsicum annuum HOM05D007804 ORTHO05D009828 2.5e-13 79.7 172 38.4
Glyma.13G067400 Glycine max HOM05D007804 ORTHO05D009828 2.5e-13 79.7 175 43.4
Hma1.2p1_0375F.1_g138910 Hydrangea macrophylla HOM05D007804 ORTHO05D009828 5.5e-13 78.6 161 41.6
VMungo0464G0276 Vigna mungo HOM05D007804 ORTHO05D009828 5.5e-13 78.6 178 40.4
Gohir.D09G022600 Gossypium hirsutum HOM05D007804 ORTHO05D009828 7.2e-13 78.2 161 47.2
ClCG09G018550 Citrullus lanatus HOM05D007804 ORTHO05D009828 1.6e-12 77.0 147 49.7
Duzib147G0590 Durio zibethinus HOM05D007804 ORTHO05D009828 1.6e-12 77.0 149 36.9
Nn3g17058 Nelumbo nucifera HOM05D007804 ORTHO05D009828 8.0e-12 74.7 178 38.2
Phvul.004G023300 Phaseolus vulgaris HOM05D007804 ORTHO05D009828 8.0e-12 74.7 174 43.1
Gorai.006G026600 Gossypium raimondii HOM05D007804 ORTHO05D009828 1.0e-11 74.3 164 45.1
Lj2g0027470 Lotus japonicus HOM05D007804 ORTHO05D009828 1.0e-11 74.3 173 41.6
Lalb_Chr21g0319161 Lupinus albus HOM05D007804 ORTHO05D009828 1.0e-11 74.3 165 41.2
Manes.15G177500 Manihot esculenta HOM05D007804 ORTHO05D009828 1.0e-11 74.3 170 44.7
DCAR_011178 Daucus carota HOM05D007804 ORTHO05D009828 1.4e-11 73.9 174 37.9
Psat1g077320 Pisum sativum HOM05D007804 ORTHO05D009828 1.4e-11 73.9 166 36.7
unitig_899.g15501 Utricularia gibba HOM05D007804 ORTHO05D009828 1.4e-11 73.9 145 42.8
Lsat_1_v5_gn_4_180340 Lactuca sativa HOM05D007804 ORTHO05D009828 4.0e-11 72.4 166 42.2
Thecc.04G069800 Theobroma cacao HOM05D007804 ORTHO05D009828 4.0e-11 72.4 154 39.6
Medtr6g009320 Medicago truncatula HOM05D007804 ORTHO05D009828 5.2e-11 72.0 169 40.2
Nn4g22964 Nelumbo nucifera HOM05D007804 ORTHO05D009828 6.8e-11 71.6 183 35.5
Sed0002452 Sechium edule HOM05D007804 ORTHO05D009828 6.8e-11 71.6 170 40.6
MELO3C021487.2 Cucumis melo HOM05D007804 ORTHO05D009828 1.2e-10 70.9 143 44.8
ECA232G1800 Erigeron canadensis HOM05D007804 ORTHO05D009828 1.2e-10 70.9 156 40.4
FAN09G3343 Fragaria x ananassa HOM05D007804 ORTHO05D009828 1.5e-10 70.5 169 36.7
FvH4_6g49720 Fragaria vesca HOM05D007804 ORTHO05D009828 2.0e-10 70.1 143 39.9
FAN05G0497 Fragaria x ananassa HOM05D007804 ORTHO05D009828 2.0e-10 70.1 143 39.9
FAN14G3729 Fragaria x ananassa HOM05D007804 ORTHO05D009828 2.0e-10 70.1 143 39.9
SalBow1G7839 Salvia bowleyana HOM05D007804 ORTHO05D009828 3.4e-10 69.3 151 39.1
FAN02G3435 Fragaria x ananassa HOM05D007804 ORTHO05D009828 4.4e-10 68.9 143 39.9
Manes.17G117500 Manihot esculenta HOM05D007804 ORTHO05D009828 5.7e-10 68.6 156 37.8
CsaV3_5G037680 Cucumis sativus L. HOM05D007804 ORTHO05D009828 9.8e-10 67.8 160 41.2
RcHm_v2.0_Chr2g0169751 Rosa chinensis HOM05D007804 ORTHO05D009828 1.7e-09 67.0 136 39.7
TPR.G32605 Trifolium pratense HOM05D007804 ORTHO05D009828 1.1e-08 64.3 172 39.0
Lalb_Chr02g0159931 Lupinus albus HOM05D007804 ORTHO05D009828 2.4e-08 63.2 184 38.6
Sed0004613 Sechium edule HOM05D007804 ORTHO05D009828 2.4e-08 63.2 142 37.3
Sed0005835 Sechium edule HOM05D007804 ORTHO05D009828 2.4e-08 63.2 142 37.3
Psat1g077160 Pisum sativum HOM05D007804 ORTHO05D009828 4.1e-08 62.4 174 39.7
Atru.chr8.2473 Acer truncatum HOM05D007804 ORTHO05D009828 3.5e-07 59.3 178 39.3
Manes.17G120501 Manihot esculenta HOM05D007804 ORTHO05D009828 3.5e-07 59.3 153 36.6
TWI36G0430 Tripterygium wilfordii HOM05D007804 ORTHO05D009828 1.0e-06 57.8 165 37.0
TAR622G0153 Trochodendron aralioides HOM05D007804 ORTHO05D009828 2.9e-06 56.2 161 32.9


User provided reference genes

Program Settings