Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0004581 Camellia sinensis var. sinensis HOM05D006063 ORTHO05D000023 0.0e+00 1402.9 797 100.0
CSS0046279 Camellia sinensis var. sinensis HOM05D006063 ORTHO05D000023 7.6e-264 914.1 531 100.0
vmacro10365 Vaccinium macrocarpon HOM05D006063 ORTHO05D000023 8.0e-221 771.2 758 59.6
Actinidia34754 Actinidia chinensis HOM05D006063 ORTHO05D000023 1.8e-220 770.0 738 60.7
Rhsim09G0137100 Rhododendron simsii HOM05D006063 ORTHO05D000023 5.2e-220 768.5 789 57.7
TAR362G1155 Trochodendron aralioides HOM05D006063 ORTHO05D000023 7.1e-177 625.2 819 48.0
Hund07147 Selenicereus undatus HOM05D006063 ORTHO05D000023 4.1e-140 503.1 759 41.5
Aqoxy2G04022 Aquilegia oxysepala HOM05D006063 ORTHO05D000023 1.5e-139 501.1 762 42.8
MD04G1235500 Malus domestica HOM05D006063 ORTHO05D000023 5.0e-138 496.1 808 41.3
Nitab4.5_0000504g0070 Nicotiana tabacum HOM05D006063 ORTHO05D000023 8.4e-138 495.4 748 43.7
EL10Ac4g09796 Beta vulgaris HOM05D006063 ORTHO05D000023 2.1e-136 490.7 822 41.1
Sed0026121 Sechium edule HOM05D006063 ORTHO05D000023 1.1e-134 485.0 675 45.0
Manes.09G145100 Manihot esculenta HOM05D006063 ORTHO05D000023 3.3e-134 483.4 763 43.0
MELO3C010119.2 Cucumis melo HOM05D006063 ORTHO05D000023 4.8e-133 479.6 756 42.2
Sc16g0010060 Simmondsia chinensis HOM05D006063 ORTHO05D000023 8.2e-133 478.8 759 42.8
Cc09_g03150 Coffea canephora HOM05D006063 ORTHO05D000023 6.9e-132 475.7 661 45.5
Dinv03784 Davidia involucrata HOM05D006063 ORTHO05D000023 6.9e-132 475.7 488 54.9
CANSAT54G1152 Cannabis sativa HOM05D006063 ORTHO05D000023 1.3e-130 471.5 816 42.0
Potri.019G029400 Populus trichocarpa HOM05D006063 ORTHO05D000023 6.5e-130 469.2 749 42.9
FAN09G4822 Fragaria x ananassa HOM05D006063 ORTHO05D000023 4.2e-129 466.5 752 42.6
Prupe.6G355400 Prunus persica HOM05D006063 ORTHO05D000023 4.2e-129 466.5 803 41.0
FAN05G0856 Fragaria x ananassa HOM05D006063 ORTHO05D000023 7.2e-129 465.7 758 42.9
FvH4_6g01260 Fragaria vesca HOM05D006063 ORTHO05D000023 9.4e-129 465.3 754 42.7
TWI34G0066 Tripterygium wilfordii HOM05D006063 ORTHO05D000023 1.6e-128 464.5 767 43.4
Sopen04g021710 Solanum pennellii HOM05D006063 ORTHO05D000023 2.7e-128 463.8 745 42.8
Nitab4.5_0004201g0010 Nicotiana tabacum HOM05D006063 ORTHO05D000023 4.6e-128 463.0 748 42.2
CAN.G4.18 Capsicum annuum HOM05D006063 ORTHO05D000023 2.3e-127 460.7 745 43.0
Sabra19G0036100 Salix brachista HOM05D006063 ORTHO05D000023 3.9e-127 459.9 744 41.9
Sabra19G0039200 Salix brachista HOM05D006063 ORTHO05D000023 6.7e-127 459.1 744 41.9
Solyc04g050760.4 Solanum lycopersicum HOM05D006063 ORTHO05D000023 8.8e-127 458.8 748 42.4
ClCG03G011330 Citrullus lanatus HOM05D006063 ORTHO05D000023 3.3e-126 456.8 822 39.1
PGSC0003DMG400015112 Solanum tuberosum HOM05D006063 ORTHO05D000023 9.7e-126 455.3 745 42.8
FAN02G3689 Fragaria x ananassa HOM05D006063 ORTHO05D000023 1.8e-124 451.1 755 42.0
Thecc.05G261400 Theobroma cacao HOM05D006063 ORTHO05D000023 5.3e-124 449.5 768 41.0
Ciclev10019009m.g Citrus clementina HOM05D006063 ORTHO05D000023 6.9e-124 449.1 757 41.9
CsaV3_1G044890 Cucumis sativus L. HOM05D006063 ORTHO05D000023 1.2e-123 448.4 753 40.4
PSO063G1700 Papaver somniferum HOM05D006063 ORTHO05D000023 2.6e-123 447.2 809 41.2
Lsat_1_v5_gn_9_46040 Lactuca sativa HOM05D006063 ORTHO05D000023 9.4e-121 438.7 696 42.8
AUR62005299 Chenopodium quinoa HOM05D006063 ORTHO05D000765 1.5e-118 431.4 709 39.9
Cpa.g.sc51.61 Carica papaya HOM05D006063 ORTHO05D000023 2.6e-118 430.6 572 45.8
MBI07_g04744_MAGBIO Magnolia biondii HOM05D006063 ORTHO05D000023 4.4e-118 429.9 776 40.6
PSO017G2613 Papaver somniferum HOM05D006063 ORTHO05D000023 5.7e-118 429.5 752 39.5
Eucgr.H04160 Eucalyptus grandis HOM05D006063 ORTHO05D000023 2.2e-117 427.6 703 42.1
Hma1.2p1_0153F.1_g067880 Hydrangea macrophylla HOM05D006063 ORTHO05D000023 8.2e-117 425.6 464 53.4
Gorai.013G118800 Gossypium raimondii HOM05D006063 ORTHO05D000023 9.1e-116 422.2 759 39.0
Gohir.D13G106000 Gossypium hirsutum HOM05D006063 ORTHO05D000023 2.6e-115 420.6 759 38.9
MSTRG.9222 Avicennia marina HOM05D006063 ORTHO05D000023 2.2e-114 417.5 793 39.0
ATR0618G015 Amborella trichopoda HOM05D006063 ORTHO05D000023 6.7e-111 406.0 767 39.0
Oeu010183.1 Olea europaea HOM05D006063 ORTHO05D000023 1.5e-110 404.8 604 42.4
Lj2A50T27 Lonicera japonica HOM05D006063 ORTHO05D000023 4.5e-107 393.3 437 51.0
Migut.F02045 Erythranthe guttata HOM05D006063 ORTHO05D000023 1.3e-106 391.7 764 38.1
HanXRQChr15g0491401 Helianthus annuus HOM05D006063 ORTHO05D000023 2.5e-105 387.5 747 38.4
THA.LOC104820746 Tarenaya hassleriana HOM05D006063 ORTHO05D000023 1.8e-103 381.3 655 38.5
SalBow1G1068 Salvia bowleyana HOM05D006063 ORTHO05D000023 9.1e-100 369.0 794 37.2
SGA_v2.0_scaffold62G21476 Striga asiatica HOM05D006063 ORTHO05D000023 1.2e-99 368.6 666 38.9
AL3G14090 Arabidopsis lyrata HOM05D006063 ORTHO05D000023 3.5e-99 367.1 665 38.0
Sp3g03130 Schrenkiella parvula HOM05D006063 ORTHO05D000023 5.9e-99 366.3 754 36.7
Peaxi162Scf00071g01413 Petunia axillaris HOM05D006063 ORTHO05D000023 7.7e-99 365.9 750 38.5
Carub.0003s0342 Capsella rubella HOM05D006063 ORTHO05D000023 2.2e-98 364.4 614 39.4
SalBow1G3325 Salvia bowleyana HOM05D006063 ORTHO05D000023 2.2e-98 364.4 703 39.1
AT3G04160 Arabidopsis thaliana HOM05D006063 ORTHO05D000023 5.5e-97 359.8 768 36.3
SHI14775 Sapria himalayana HOM05D006063 ORTHO05D000023 1.0e-95 355.5 532 43.2
Lalb_Chr21g0311331 Lupinus albus HOM05D006063 ORTHO05D000023 1.4e-95 355.1 748 37.3
Thhalv10020148m.g Eutrema salsugineum HOM05D006063 ORTHO05D000023 1.8e-95 354.8 737 36.5
CARHR078300 Cardamine hirsuta HOM05D006063 ORTHO05D000023 8.8e-95 352.4 753 35.1
Glyma.10G169000 Glycine max HOM05D006063 ORTHO05D000023 1.5e-94 351.7 746 36.7
Aa31LG5G14700 Aethionema arabicum HOM05D006063 ORTHO05D000023 4.4e-94 350.1 817 34.8
VMungo0720G1344 Vigna mungo HOM05D006063 ORTHO05D000023 2.2e-93 347.8 742 36.0
Lj3g0014127 Lotus japonicus HOM05D006063 ORTHO05D000023 1.1e-92 345.5 741 35.9
CiPaw.07G075500 Carya illinoinensis HOM05D006063 ORTHO05D000023 1.3e-90 338.6 535 43.2
Phvul.L001648 Phaseolus vulgaris HOM05D006063 ORTHO05D000023 6.6e-90 336.3 740 35.1
FAN05G5389 Fragaria x ananassa HOM05D006063 ORTHO05D000023 2.8e-88 330.9 584 40.8
BcaB04g19349 Brassica carinata HOM05D006063 ORTHO05D000023 3.4e-86 323.9 733 34.0
arahy.Tifrunner.gnm1.ann1.JVQ2Z4 Arachis hypogaea HOM05D006063 ORTHO05D000023 6.4e-85 319.7 756 34.5
arahy.Tifrunner.gnm1.ann1.2N7XA4 Arachis hypogaea HOM05D006063 ORTHO05D000023 3.2e-84 317.4 754 34.6
Ca_09979_v3 Cicer arietinum L. HOM05D006063 ORTHO05D000023 5.4e-84 316.6 756 34.4
Ca_09995_v3 Cicer arietinum L. HOM05D006063 ORTHO05D000023 5.4e-84 316.6 756 34.4
MBI18_g19284_MAGBIO Magnolia biondii HOM05D006063 ORTHO05D000023 1.2e-83 315.5 468 43.2
Medtr1g079470 Medicago truncatula HOM05D006063 ORTHO05D000023 3.3e-81 307.4 743 34.6
C03p40730 Brassica napus HOM05D006063 ORTHO05D000023 4.0e-79 300.4 742 33.7
BraA03t12527Z Brassica rapa HOM05D006063 ORTHO05D000023 4.6e-75 287.0 744 34.3
A03p33520 Brassica napus HOM05D006063 ORTHO05D000023 3.0e-74 284.3 744 34.1
QL07p027196 Quercus lobata HOM05D006063 ORTHO05D000023 3.9e-74 283.9 854 32.1
BolC3t16339H Brassica oleracea HOM05D006063 ORTHO05D000023 8.1e-72 276.2 737 32.6
BcaC01g04385 Brassica carinata HOM05D006063 ORTHO05D000023 3.1e-71 274.2 742 32.3
Haze_04487 Corylus avellana HOM05D006063 ORTHO05D000023 5.2e-71 273.5 726 33.9
Gohir.A13G102800 Gossypium hirsutum HOM05D006063 ORTHO05D000023 2.2e-69 268.1 548 36.9
RcHm_v2.0_Chr3g0448821 Rosa chinensis HOM05D006063 ORTHO05D000023 1.4e-63 248.8 439 42.1
Atru.chr2.1232 Acer truncatum HOM05D006063 ORTHO05D000023 7.6e-62 243.0 341 43.4
MBI18_g46979_MAGBIO Magnolia biondii HOM05D006063 ORTHO05D000023 7.1e-60 236.5 571 35.0
CDE05G2869 Ceratophyllum demersum HOM05D006063 ORTHO05D000023 2.7e-59 234.6 207 55.6
Zm00001eb086400 Zea mays HOM05D006063 ORTHO05D000023 6.2e-56 223.4 435 37.9
ECA232G4499 Erigeron canadensis HOM05D006063 ORTHO05D000023 8.1e-56 223.0 496 37.7
GSVIVG01026370001 Vitis vinifera HOM05D006063 ORTHO05D000023 2.0e-54 218.4 336 46.7
HPP92_006232 Vanilla planifolia HOM05D006063 ORTHO05D000023 1.4e-52 212.2 238 46.6
AagrBONN_evm.TU.Sc2ySwM_362.520 Anthoceros agrestis HOM05D006063 ORTHO05D000023 7.3e-49 199.9 566 29.0
COL.COLO4_20542 Corchorus olitorius HOM05D006063 ORTHO05D000023 4.8e-48 197.2 341 42.2
SMO351G0027 Selaginella moellendorffii HOM05D006063 ORTHO05D000023 4.0e-47 194.1 604 28.8
TPR.G10281 Trifolium pratense HOM05D006063 ORTHO05D000023 4.5e-46 190.7 412 35.9
FvH4_5g38930 Fragaria vesca HOM05D006063 ORTHO05D000023 2.9e-45 188.0 303 44.9
Os04g0349401 Oryza sativa ssp. japonica HOM05D006063 ORTHO05D000023 4.9e-45 187.2 351 37.3
Atru.chr2.1231 Acer truncatum HOM05D006063 ORTHO05D000023 3.0e-42 177.9 184 58.2
Pp3c17_4760 Physcomitrium patens HOM05D006063 ORTHO05D000023 1.5e-41 175.6 697 28.3
Mapoly0001s0430 Marchantia polymorpha HOM05D006063 ORTHO05D000023 2.5e-41 174.9 817 26.6
A05p43190 Brassica napus HOM05D006063 ORTHO05D000023 1.3e-40 172.6 332 34.6
CDE05G3203 Ceratophyllum demersum HOM05D006063 ORTHO05D000023 4.8e-40 170.6 338 40.8
HPP92_006233 Vanilla planifolia HOM05D006063 ORTHO05D000023 1.4e-39 169.1 337 41.5
Psat6g141160 Pisum sativum HOM05D006063 ORTHO05D000023 2.0e-38 165.2 432 34.5
Dinv03778 Davidia involucrata HOM05D006063 ORTHO05D045100 8.4e-37 159.8 252 46.4
RcHm_v2.0_Chr3g0448831 Rosa chinensis HOM05D006063 ORTHO05D000023 1.0e-29 136.3 156 46.2
CsaV3_1G044530 Cucumis sativus L. HOM05D006063 ORTHO05D000023 1.6e-27 129.0 163 49.1
DCAR_005531 Daucus carota HOM05D006063 ORTHO05D000023 3.9e-26 124.4 206 34.5
SEGI_40887 Sequoiadendron giganteum HOM05D006063 ORTHO05D000023 5.5e-20 104.0 273 34.8
BraA05t23062Z Brassica rapa HOM05D006063 ORTHO05D000023 4.6e-19 100.9 110 52.7
Hma1.2p1_0153F.1_g067860 Hydrangea macrophylla HOM05D006063 ORTHO05D045100 6.7e-18 97.1 207 41.5
A05p43200 Brassica napus HOM05D000005 ORTHO05D000449 1.3e-16 92.8 276 33.3
C05p62930 Brassica napus HOM05D000005 ORTHO05D000294 1.6e-16 92.4 120 43.3
MBI18_g46978_MAGBIO Magnolia biondii HOM05D006063 ORTHO05D000023 3.7e-16 91.3 189 35.4
Cpa.g.sc51.65 Carica papaya HOM05D006063 ORTHO05D000023 1.1e-15 89.7 152 37.5
FAN08G2149 Fragaria x ananassa HOM05D006063 ORTHO05D000023 5.7e-09 67.4 224 32.1
DCAR_005530 Daucus carota HOM05D006063 ORTHO05D000023 4.8e-08 64.3 221 34.4
Dinv03782 Davidia involucrata HOM05D006063 ORTHO05D045148 8.2e-08 63.5 40 80.0
BcaC05g30213 Brassica carinata HOM05D006063 ORTHO05D000023 1.1e-07 63.2 48 68.8
Cpa.g.sc51.64 Carica papaya HOM05D006063 ORTHO05D000023 2.0e-06 58.9 111 39.6
TPR.G14651 Trifolium pratense HOM05D006063 ORTHO05D000023 5.9e-06 57.4 231 30.3


User provided reference genes

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