Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0004568 Camellia sinensis var. sinensis HOM05D006961 ORTHO05D008809 7.3e-110 400.6 205 100.0
Actinidia19920 Actinidia chinensis HOM05D006961 ORTHO05D008809 2.1e-72 276.2 205 72.2
Dinv34116 Davidia involucrata HOM05D006961 ORTHO05D008809 3.7e-69 265.4 205 68.8
Hma1.2p1_0357F.1_g134450 Hydrangea macrophylla HOM05D006961 ORTHO05D008809 1.1e-62 243.8 208 65.4
Rhsim12G0076500 Rhododendron simsii HOM05D006961 ORTHO05D008809 1.0e-55 220.7 211 57.8
vmacro01328 Vaccinium macrocarpon HOM05D006961 ORTHO05D008809 1.8e-55 219.9 205 62.0
TAR622G0866 Trochodendron aralioides HOM05D006961 ORTHO05D008809 3.3e-54 215.7 208 59.6
Eucgr.G02462 Eucalyptus grandis HOM05D006961 ORTHO05D008809 1.3e-53 213.8 129 82.2
SGA_v2.0_scaffold16G07754 Striga asiatica HOM05D006961 ORTHO05D008809 2.8e-53 212.6 202 57.9
MSTRG.7764 Avicennia marina HOM05D006961 ORTHO05D008809 6.3e-53 211.5 137 74.5
MELO3C002920.2 Cucumis melo HOM05D006961 ORTHO05D008809 8.2e-53 211.1 201 58.2
ClCG09G020750 Citrullus lanatus HOM05D006961 ORTHO05D008809 4.1e-52 208.8 203 57.1
TWI75G1056 Tripterygium wilfordii HOM05D006961 ORTHO05D008809 4.1e-52 208.8 200 59.0
SalBow2G3426 Salvia bowleyana HOM05D006961 ORTHO05D008809 6.9e-52 208.0 139 73.4
CsaV3_5G025620 Cucumis sativus L. HOM05D006961 ORTHO05D008809 1.5e-51 206.8 201 57.7
TPR.G24476 Trifolium pratense HOM05D006961 ORTHO05D008809 3.4e-51 205.7 136 77.2
CAN.G1340.11 Capsicum annuum HOM05D006961 ORTHO05D008809 4.5e-51 205.3 210 53.3
Lalb_Chr17g0341001 Lupinus albus HOM05D006961 ORTHO05D008809 4.5e-51 205.3 156 69.2
Medtr5g043580 Medicago truncatula HOM05D006961 ORTHO05D008809 7.7e-51 204.5 136 77.2
PGR119G1669 Punica granatum HOM05D006961 ORTHO05D008809 2.9e-50 202.6 129 75.2
unitig_22.g6499 Utricularia gibba HOM05D006961 ORTHO05D008809 5.0e-50 201.8 133 75.2
Ciclev10032810m.g Citrus clementina HOM05D006961 ORTHO05D008809 1.9e-49 199.9 202 55.9
Ca_04910_v3 Cicer arietinum L. HOM05D006961 ORTHO05D008809 2.5e-49 199.5 136 75.0
Prupe.1G282200 Prunus persica HOM05D006961 ORTHO05D008809 2.5e-49 199.5 202 58.4
VMungo1215G1627 Vigna mungo HOM05D006961 ORTHO05D008809 5.5e-49 198.4 205 57.6
PGSC0003DMG400028327 Solanum tuberosum HOM05D006961 ORTHO05D008809 9.4e-49 197.6 209 54.1
GSVIVG01012179001 Vitis vinifera HOM05D006961 ORTHO05D008809 9.4e-49 197.6 133 72.2
Nn3g17372 Nelumbo nucifera HOM05D006961 ORTHO05D008809 1.2e-48 197.2 193 54.9
Atru.chr11.1688 Acer truncatum HOM05D006961 ORTHO05D008809 1.6e-48 196.8 171 59.6
Duzib268G0330 Durio zibethinus HOM05D006961 ORTHO05D008809 1.6e-48 196.8 136 72.8
arahy.Tifrunner.gnm1.ann1.T2VQ83 Arachis hypogaea HOM05D006961 ORTHO05D008809 2.1e-48 196.4 192 58.3
arahy.Tifrunner.gnm1.ann1.TP0XC6 Arachis hypogaea HOM05D006961 ORTHO05D008809 2.1e-48 196.4 192 58.3
Solyc05g012600.3 Solanum lycopersicum HOM05D006961 ORTHO05D008809 6.1e-48 194.9 163 62.0
Nitab4.5_0000334g0230 Nicotiana tabacum HOM05D006961 ORTHO05D008809 7.9e-48 194.5 205 54.6
Cc11_g12360 Coffea canephora HOM05D006961 ORTHO05D008809 1.4e-47 193.7 172 59.9
Manes.05G107700 Manihot esculenta HOM05D006961 ORTHO05D008809 1.4e-47 193.7 125 75.2
MD16G1064700 Malus domestica HOM05D006961 ORTHO05D008809 1.8e-47 193.4 204 55.9
Psat2g128160 Pisum sativum HOM05D006961 ORTHO05D008809 1.8e-47 193.4 136 72.8
Sopen05g007430 Solanum pennellii HOM05D006961 ORTHO05D008809 1.8e-47 193.4 167 60.5
Oeu015341.2 Olea europaea HOM05D006961 ORTHO05D008809 2.3e-47 193.0 196 55.6
Potri.010G161400 Populus trichocarpa HOM05D006961 ORTHO05D008809 2.3e-47 193.0 204 53.4
Gohir.A05G306100 Gossypium hirsutum HOM05D006961 ORTHO05D008809 3.9e-47 192.2 136 70.6
CiPaw.06G090400 Carya illinoinensis HOM05D006961 ORTHO05D008809 6.7e-47 191.4 207 54.6
Migut.L01221 Erythranthe guttata HOM05D006961 ORTHO05D008809 6.7e-47 191.4 176 56.8
Gohir.D05G306100 Gossypium hirsutum HOM05D006961 ORTHO05D008809 6.7e-47 191.4 136 70.6
RcHm_v2.0_Chr4g0438851 Rosa chinensis HOM05D006961 ORTHO05D008809 8.8e-47 191.0 139 69.8
MBI16_g15564_MAGBIO Magnolia biondii HOM05D006961 ORTHO05D008809 1.5e-46 190.3 132 69.7
CANSAT64G0471 Cannabis sativa HOM05D006961 ORTHO05D008809 2.0e-46 189.9 160 63.8
COL.COLO4_27931 Corchorus olitorius HOM05D006961 ORTHO05D008809 2.0e-46 189.9 155 63.2
ECA234G0986 Erigeron canadensis HOM05D006961 ORTHO05D008809 2.0e-46 189.9 139 69.8
FvH4_4g30480 Fragaria vesca HOM05D006961 ORTHO05D008809 2.0e-46 189.9 161 63.4
DCAR_027451 Daucus carota HOM05D006961 ORTHO05D008809 2.6e-46 189.5 209 51.2
Lj2g0005939 Lotus japonicus HOM05D006961 ORTHO05D008809 2.6e-46 189.5 125 75.2
Peaxi162Scf00314g00025 Petunia axillaris HOM05D006961 ORTHO05D008809 3.3e-46 189.1 194 53.1
Thecc.02G336300 Theobroma cacao HOM05D006961 ORTHO05D008809 3.3e-46 189.1 136 69.1
PSO017G3353 Papaver somniferum HOM05D006961 ORTHO05D008809 4.4e-46 188.7 200 56.5
Actinidia31945 Actinidia chinensis HOM05D006961 ORTHO05D008809 5.7e-46 188.3 159 66.7
FAN07G0372 Fragaria x ananassa HOM05D006961 ORTHO05D008809 5.7e-46 188.3 209 55.0
Sed0005182 Sechium edule HOM05D006961 ORTHO05D008809 5.7e-46 188.3 189 57.1
Cpa.g.sc1.93 Carica papaya HOM05D006961 ORTHO05D008809 7.4e-46 188.0 180 57.8
Haze_11979 Corylus avellana HOM05D006961 ORTHO05D004702 7.4e-46 188.0 141 68.1
FAN17G2308 Fragaria x ananassa HOM05D006961 ORTHO05D008809 9.7e-46 187.6 204 55.4
FAN22G0366 Fragaria x ananassa HOM05D006961 ORTHO05D008809 9.7e-46 187.6 204 55.4
QL03p070935 Quercus lobata HOM05D006961 ORTHO05D008809 1.3e-45 187.2 204 51.0
THA.LOC104824066 Tarenaya hassleriana HOM05D006961 ORTHO05D008809 1.7e-45 186.8 186 55.4
Aqoxy3G00448 Aquilegia oxysepala HOM05D006961 ORTHO05D008809 2.2e-45 186.4 207 55.1
PSO478G0730 Papaver somniferum HOM05D006961 ORTHO05D008809 2.2e-45 186.4 205 55.6
Glyma.02G113800 Glycine max HOM05D006961 ORTHO05D008809 2.8e-45 186.0 176 56.8
HanXRQChr12g0379241 Helianthus annuus HOM05D006961 ORTHO05D008809 3.7e-45 185.7 139 68.3
Hund05862 Selenicereus undatus HOM05D006961 ORTHO05D008809 6.3e-45 184.9 136 67.6
AUR62003136 Chenopodium quinoa HOM05D006961 ORTHO05D008809 8.2e-45 184.5 201 53.7
Lsat_1_v5_gn_4_10260 Lactuca sativa HOM05D006961 ORTHO05D008809 3.1e-44 182.6 139 66.2
Cfa008905 Carpinus fangiana HOM05D006961 ORTHO05D008809 5.3e-44 181.8 140 66.4
Ah.03g139190 Amaranthus hybridus HOM05D006961 ORTHO05D008809 6.9e-44 181.4 130 70.0
Glyma.01G055400 Glycine max HOM05D006961 ORTHO05D008809 6.9e-44 181.4 127 68.5
AUR62007955 Chenopodium quinoa HOM05D006961 ORTHO05D008809 9.1e-44 181.0 200 53.0
MD13G1065900 Malus domestica HOM05D006961 ORTHO05D008809 4.5e-43 178.7 168 59.5
Thhalv10005024m.g Eutrema salsugineum HOM05D006961 ORTHO05D008809 8.5e-42 174.5 194 52.6
Aa31LG2G7160 Aethionema arabicum HOM05D006961 ORTHO05D008809 1.1e-41 174.1 138 64.5
EL10Ac6g14957 Beta vulgaris HOM05D006961 ORTHO05D008809 1.9e-41 173.3 130 64.6
AT2G03420 Arabidopsis thaliana HOM05D006961 ORTHO05D008809 4.2e-41 172.2 136 65.4
ATR0111G017 Amborella trichopoda HOM05D006961 ORTHO05D008809 5.5e-41 171.8 163 55.8
AL5G13170 Arabidopsis lyrata HOM05D006961 ORTHO05D008809 5.5e-41 171.8 136 65.4
Carub.0005s0238 Capsella rubella HOM05D006961 ORTHO05D008809 5.5e-41 171.8 136 65.4
Sp2g14330 Schrenkiella parvula HOM05D006961 ORTHO05D008809 7.2e-41 171.4 181 53.0
Lj3A1032T68 Lonicera japonica HOM05D006961 ORTHO05D008809 3.6e-40 169.1 127 67.7
HPP92_023640 Vanilla planifolia HOM05D006961 ORTHO05D008809 3.6e-40 169.1 124 64.5
BcaB07g30670 Brassica carinata HOM05D006961 ORTHO05D008809 6.1e-40 168.3 162 54.3
CDE07G0364 Ceratophyllum demersum HOM05D006961 ORTHO05D008809 1.4e-39 167.2 126 66.7
CARHR145760 Cardamine hirsuta HOM05D006961 ORTHO05D008809 1.8e-39 166.8 136 63.2
BcaC04g21488 Brassica carinata HOM05D006961 ORTHO05D008809 3.0e-39 166.0 136 61.8
A09p24430 Brassica napus HOM05D006961 ORTHO05D008809 3.0e-39 166.0 136 61.8
C09p31220 Brassica napus HOM05D006961 ORTHO05D008809 3.0e-39 166.0 136 61.8
BolC9t55978H Brassica oleracea HOM05D006961 ORTHO05D008809 3.0e-39 166.0 136 61.8
BraA09t38036Z Brassica rapa HOM05D006961 ORTHO05D008809 3.0e-39 166.0 136 61.8
Zm00001eb400470 Zea mays HOM05D006961 ORTHO05D008809 1.3e-37 160.6 131 61.8
A02p33440 Brassica napus HOM05D006961 ORTHO05D008809 1.7e-37 160.2 137 60.6
CDE04G0363 Ceratophyllum demersum HOM05D006961 ORTHO05D008809 1.7e-37 160.2 122 66.4
Sc04g0007750 Simmondsia chinensis HOM05D006961 ORTHO05D008809 2.2e-37 159.8 110 68.2
SEGI_13566 Sequoiadendron giganteum HOM05D006961 ORTHO05D008809 2.0e-35 153.3 126 62.7
HPP92_023624 Vanilla planifolia HOM05D006961 ORTHO05D008809 8.0e-32 141.4 102 65.7
BcaC03g17213 Brassica carinata HOM05D006961 ORTHO05D008809 1.7e-26 123.6 105 61.9
C02p51430 Brassica napus HOM05D006961 ORTHO05D008809 1.7e-26 123.6 105 61.9
BolC2t11231H Brassica oleracea HOM05D006961 ORTHO05D008809 1.7e-26 123.6 105 61.9
Gorai.009G326100 Gossypium raimondii HOM05D006961 ORTHO05D008809 3.0e-23 112.8 95 66.3
Mapoly0047s0086 Marchantia polymorpha HOM05D006961 ORTHO05D008809 3.0e-23 112.8 127 45.7
Zm00001eb176890 Zea mays HOM05D006961 ORTHO05D008809 1.3e-21 107.5 86 61.6
Pp3c5_22460 Physcomitrium patens HOM05D006961 ORTHO05D008809 3.7e-21 105.9 148 41.9
SMO356G0726 Selaginella moellendorffii HOM05D006961 ORTHO05D008809 1.4e-20 104.0 136 44.1
AagrBONN_evm.TU.Sc2ySwM_228.3757 Anthoceros agrestis HOM05D006961 ORTHO05D008809 2.7e-19 99.8 126 42.1
SalBow2G3119 Salvia bowleyana HOM05D006961 ORTHO05D008809 1.7e-18 97.1 76 68.4
FAN12G0580 Fragaria x ananassa HOM05D006961 ORTHO05D008809 5.2e-15 85.5 50 74.0
CBR_g50745 Chara braunii HOM05D006961 ORTHO05D008809 1.2e-14 84.3 117 39.3
Cre02.g114450 Chlamydomonas reinhardtii HOM05D006961 ORTHO05D008809 5.0e-10 68.9 144 34.0
Os03g0210700 Oryza sativa ssp. japonica HOM05D006961 ORTHO05D008809 8.0e-08 61.6 48 52.1


User provided reference genes

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