Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0004547 Camellia sinensis var. sinensis HOM05D005523 ORTHO05D007089 1.7e-108 396.0 191 100.0
CSS0024141 Camellia sinensis var. sinensis HOM05D005523 ORTHO05D007089 8.6e-97 357.1 213 84.5
CSS0023178 Camellia sinensis var. sinensis HOM05D005523 ORTHO05D007089 4.4e-85 318.2 199 81.4
CSS0028074 Camellia sinensis var. sinensis HOM05D005523 ORTHO05D026295 2.1e-74 282.7 199 75.4
Rhsim09G0126700 Rhododendron simsii HOM05D005523 ORTHO05D007089 1.4e-43 180.3 188 53.2
vmacro10430 Vaccinium macrocarpon HOM05D005523 ORTHO05D007089 1.2e-42 177.2 222 47.3
Rhsim02G0238300 Rhododendron simsii HOM05D005523 ORTHO05D007089 5.7e-40 168.3 230 44.8
GSVIVG01012228001 Vitis vinifera HOM05D005523 ORTHO05D007089 3.1e-38 162.5 201 46.8
QL03p074024 Quercus lobata HOM05D005523 ORTHO05D007089 5.3e-38 161.8 224 43.3
QL03p074443 Quercus lobata HOM05D005523 ORTHO05D007089 5.3e-38 161.8 224 43.3
TWI79G0260 Tripterygium wilfordii HOM05D005523 ORTHO05D007089 6.9e-38 161.4 201 46.3
DCAR_026677 Daucus carota HOM05D005523 ORTHO05D007089 1.2e-37 160.6 113 69.0
Lj6A778G61 Lonicera japonica HOM05D005523 ORTHO05D007089 5.9e-37 158.3 111 67.6
Haze_11899 Corylus avellana HOM05D005523 ORTHO05D007089 2.9e-36 156.0 114 65.8
Potri.010G157700 Populus trichocarpa HOM05D005523 ORTHO05D007089 6.5e-36 154.8 110 63.6
Sc14g0007970 Simmondsia chinensis HOM05D005523 ORTHO05D007089 6.5e-36 154.8 126 57.9
Manes.05G109800 Manihot esculenta HOM05D005523 ORTHO05D007089 1.4e-35 153.7 110 66.4
Cfa008872 Carpinus fangiana HOM05D005523 ORTHO05D007089 3.2e-35 152.5 114 64.0
Cc03_g11190 Coffea canephora HOM05D005523 ORTHO05D007089 5.5e-35 151.8 110 66.4
Cc11_g11910 Coffea canephora HOM05D005523 ORTHO05D007089 7.2e-35 151.4 110 66.4
Nn4g23450 Nelumbo nucifera HOM05D005523 ORTHO05D007089 2.1e-34 149.8 109 65.1
CANSAT64G1787 Cannabis sativa HOM05D005523 ORTHO05D007089 2.7e-34 149.4 110 60.9
Ciclev10033727m.g Citrus clementina HOM05D005523 ORTHO05D007089 2.7e-34 149.4 180 44.4
CiPaw.05G124500 Carya illinoinensis HOM05D005523 ORTHO05D007089 7.9e-34 147.9 244 39.8
unitig_26.g10286 Utricularia gibba HOM05D005523 ORTHO05D007089 1.4e-33 147.1 157 52.2
Migut.L01183 Erythranthe guttata HOM05D005523 ORTHO05D007089 1.8e-33 146.7 103 69.9
ECA234G2689 Erigeron canadensis HOM05D005523 ORTHO05D007089 3.9e-33 145.6 187 44.4
SalBow2G2481 Salvia bowleyana HOM05D005523 ORTHO05D007089 3.9e-33 145.6 110 68.2
PSO478G5042 Papaver somniferum HOM05D005523 ORTHO05D007089 2.0e-32 143.3 128 54.7
Lsat_1_v5_gn_4_11761 Lactuca sativa HOM05D005523 ORTHO05D007089 5.7e-32 141.7 195 43.1
PGR119G1690 Punica granatum HOM05D005523 ORTHO05D007089 5.7e-32 141.7 114 59.6
Thecc.02G329500 Theobroma cacao HOM05D005523 ORTHO05D007089 7.4e-32 141.4 111 60.4
Oeu021803.1 Olea europaea HOM05D005523 ORTHO05D007089 1.7e-31 140.2 175 46.3
Oeu021804.1 Olea europaea HOM05D005523 ORTHO05D007089 1.7e-31 140.2 175 46.3
PGSC0003DMG400028314 Solanum tuberosum HOM05D005523 ORTHO05D007089 1.7e-31 140.2 194 44.8
SGA_v2.0_scaffold16G07795 Striga asiatica HOM05D005523 ORTHO05D007089 1.7e-31 140.2 106 62.3
ATR0177G042 Amborella trichopoda HOM05D005523 ORTHO05D007089 2.2e-31 139.8 117 57.3
PSO017G3752 Papaver somniferum HOM05D005523 ORTHO05D007089 2.8e-31 139.4 128 53.1
EL10Ac6g15006 Beta vulgaris HOM05D005523 ORTHO05D007089 3.7e-31 139.0 126 52.4
Solyc05g012200.3 Solanum lycopersicum HOM05D005523 ORTHO05D007089 4.8e-31 138.7 110 64.5
Sopen05g007030 Solanum pennellii HOM05D005523 ORTHO05D007089 8.2e-31 137.9 110 64.5
FvH4_4g29880 Fragaria vesca HOM05D005523 ORTHO05D007089 1.1e-30 137.5 180 44.4
Nitab4.5_0007061g0020 Nicotiana tabacum HOM05D005523 ORTHO05D007089 1.8e-30 136.7 112 63.4
Peaxi162Scf00175g00035 Petunia axillaris HOM05D005523 ORTHO05D007089 3.1e-30 136.0 111 64.0
Aqoxy3G00520 Aquilegia oxysepala HOM05D005523 ORTHO05D007089 5.3e-30 135.2 102 62.7
arahy.Tifrunner.gnm1.ann1.5T11RT Arachis hypogaea HOM05D005523 ORTHO05D007089 6.9e-30 134.8 111 56.8
COL.COLO4_27873 Corchorus olitorius HOM05D005523 ORTHO05D007089 6.9e-30 134.8 110 58.2
Nitab4.5_0000231g0170 Nicotiana tabacum HOM05D005523 ORTHO05D007089 6.9e-30 134.8 110 63.6
FAN12G2921 Fragaria x ananassa HOM05D005523 ORTHO05D007089 9.1e-30 134.4 180 43.9
Gohir.D12G164000 Gossypium hirsutum HOM05D005523 ORTHO05D007089 1.2e-29 134.0 128 53.1
Sed0024899 Sechium edule HOM05D005523 ORTHO05D007089 2.6e-29 132.9 111 54.1
CDE10G0400 Ceratophyllum demersum HOM05D005523 ORTHO05D007089 3.4e-29 132.5 110 60.9
Duzib251G0966 Durio zibethinus HOM05D005523 ORTHO05D007089 3.4e-29 132.5 126 55.6
arahy.Tifrunner.gnm1.ann1.1A68HA Arachis hypogaea HOM05D005523 ORTHO05D007089 4.5e-29 132.1 110 56.4
Gorai.008G176600 Gossypium raimondii HOM05D005523 ORTHO05D007089 7.7e-29 131.3 128 52.3
Lj4g0005251 Lotus japonicus HOM05D005523 ORTHO05D007089 7.7e-29 131.3 182 42.9
Psat7g133840 Pisum sativum HOM05D005523 ORTHO05D007089 7.7e-29 131.3 112 58.9
CAN.G707.6 Capsicum annuum HOM05D005523 ORTHO05D007089 1.0e-28 131.0 110 61.8
HanXRQChr17g0552771 Helianthus annuus HOM05D005523 ORTHO05D007089 1.0e-28 131.0 111 57.7
AUR62003091 Chenopodium quinoa HOM05D005523 ORTHO05D007089 1.7e-28 130.2 116 54.3
FAN07G2138 Fragaria x ananassa HOM05D005523 ORTHO05D007089 1.7e-28 130.2 180 43.9
FAN17G1793 Fragaria x ananassa HOM05D005523 ORTHO05D007089 1.7e-28 130.2 180 42.8
FAN22G0589 Fragaria x ananassa HOM05D005523 ORTHO05D007089 2.2e-28 129.8 180 42.8
Glyma.20G025400 Glycine max HOM05D005523 ORTHO05D007089 2.2e-28 129.8 110 55.5
Medtr4g083180 Medicago truncatula HOM05D005523 ORTHO05D007089 2.9e-28 129.4 174 44.8
AUR62007908 Chenopodium quinoa HOM05D005523 ORTHO05D007089 8.5e-28 127.9 160 43.1
Phvul.002G101900 Phaseolus vulgaris HOM05D005523 ORTHO05D007089 8.5e-28 127.9 110 58.2
Lalb_Chr05g0219911 Lupinus albus HOM05D005523 ORTHO05D007089 1.1e-27 127.5 104 61.5
TPR.G34024 Trifolium pratense HOM05D005523 ORTHO05D007089 1.9e-27 126.7 104 60.6
RcHm_v2.0_Chr4g0438141 Rosa chinensis HOM05D005523 ORTHO05D007089 3.2e-27 125.9 187 42.2
VMungo0251G1186 Vigna mungo HOM05D005523 ORTHO05D007089 3.2e-27 125.9 102 62.7
CsaV3_5G033360 Cucumis sativus L. HOM05D005523 ORTHO05D007089 1.2e-26 124.0 111 50.5
MD13G1061700 Malus domestica HOM05D005523 ORTHO05D007089 2.7e-26 122.9 110 55.5
Ca_18798_v3 Cicer arietinum L. HOM05D005523 ORTHO05D007089 3.6e-26 122.5 104 58.7
HPP92_001825 Vanilla planifolia HOM05D005523 ORTHO05D007089 4.7e-26 122.1 106 56.6
MELO3C012156.2 Cucumis melo HOM05D005523 ORTHO05D007089 6.1e-26 121.7 110 51.8
Hund25171 Selenicereus undatus HOM05D005523 ORTHO05D007089 6.1e-26 121.7 126 54.8
Zm00001eb029510 Zea mays HOM05D005523 ORTHO05D007089 1.0e-25 120.9 105 58.1
MBI19_g25293_MAGBIO Magnolia biondii HOM05D005523 ORTHO05D007089 1.4e-25 120.6 84 66.7
SEGI_10872 Sequoiadendron giganteum HOM05D005523 ORTHO05D007089 1.8e-25 120.2 107 53.3
CARHR145990 Cardamine hirsuta HOM05D005523 ORTHO05D007089 6.7e-25 118.2 197 36.5
MD16G1060200 Malus domestica HOM05D005523 ORTHO05D007089 1.1e-24 117.5 109 54.1
THA.LOC104805203 Tarenaya hassleriana HOM05D005523 ORTHO05D007089 1.5e-24 117.1 181 39.2
Sp2g14490 Schrenkiella parvula HOM05D005523 ORTHO05D007089 3.3e-24 115.9 117 50.4
C07p34020 Brassica napus HOM05D005523 ORTHO05D007089 4.4e-24 115.5 117 51.3
BolC7t43916H Brassica oleracea HOM05D005523 ORTHO05D007089 4.4e-24 115.5 117 51.3
Aa31LG2G7010 Aethionema arabicum HOM05D005523 ORTHO05D007089 7.4e-24 114.8 125 48.0
Atru.chr11.1618 Acer truncatum HOM05D005523 ORTHO05D007089 9.7e-24 114.4 114 53.5
A06p43010 Brassica napus HOM05D005523 ORTHO05D007089 9.7e-24 114.4 114 51.8
Prupe.1G288300 Prunus persica HOM05D005523 ORTHO05D007089 3.7e-23 112.5 97 55.7
Carub.0005s0279 Capsella rubella HOM05D005523 ORTHO05D007089 4.8e-23 112.1 110 52.7
BcaB07g30661 Brassica carinata HOM05D005523 ORTHO05D007089 1.1e-22 110.9 117 49.6
Thhalv10003838m.g Eutrema salsugineum HOM05D005523 ORTHO05D007089 1.8e-22 110.2 113 50.4
AL5G13440 Arabidopsis lyrata HOM05D005523 ORTHO05D007089 5.3e-22 108.6 109 50.5
AT2G03667 Arabidopsis thaliana HOM05D005523 ORTHO05D007089 2.6e-21 106.3 111 49.5
AagrBONN_evm.TU.Sc2ySwM_228.676 Anthoceros agrestis HOM05D005523 ORTHO05D007089 1.7e-20 103.6 105 52.4
Pp3c13_5080 Physcomitrium patens HOM05D005523 ORTHO05D007089 3.8e-20 102.4 111 45.9
CBR_g50115 Chara braunii HOM05D005523 ORTHO05D007089 1.1e-19 100.9 167 34.7
SMO364G0955 Selaginella moellendorffii HOM05D005523 ORTHO05D007089 9.4e-19 97.8 102 51.0
Cpa.g.sc1.132 Carica papaya HOM05D005523 ORTHO05D007089 2.7e-18 96.3 171 35.7
ClCG05G023660 Citrullus lanatus HOM05D005523 ORTHO05D007089 3.3e-16 89.4 67 59.7
Cre07.g321050 Chlamydomonas reinhardtii HOM05D005523 ORTHO05D007089 1.0e-12 77.8 100 40.0
Os12g0574900 Oryza sativa ssp. japonica HOM05D005523 ORTHO05D007089 2.2e-12 76.6 78 47.4
TAR374G1311 Trochodendron aralioides HOM05D005523 ORTHO05D007089 5.0e-12 75.5 57 61.4
CiPaw.04G124200 Carya illinoinensis HOM05D005523 ORTHO05D007089 2.5e-11 73.2 69 52.2
Actinidia12916 Actinidia chinensis HOM05D005523 ORTHO05D007089 1.4e-09 67.4 156 38.5
PRCOL_00003408 Prasinoderma coloniale HOM05D005523 ORTHO05D007089 5.7e-08 62.0 88 34.1
Eucgr.G02442 Eucalyptus grandis HOM05D005523 ORTHO05D007089 9.8e-08 61.2 46 67.4
Actinidia28650 Actinidia chinensis HOM05D005523 ORTHO05D007089 2.2e-07 60.1 61 52.5
Actinidia36736 Actinidia chinensis HOM05D005523 ORTHO05D026295 2.2e-07 60.1 61 52.5
Actinidia14170 Actinidia chinensis HOM05D005523 ORTHO05D026295 1.4e-06 57.4 53 54.7
Actinidia11693 Actinidia chinensis HOM05D005523 ORTHO05D026295 3.1e-06 56.2 37 64.9


User provided reference genes

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