Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0004539 Camellia sinensis var. sinensis HOM05D009338 ORTHO05D010862 1.9e-34 148.7 78 100.0
CSS0015548 Camellia sinensis var. sinensis HOM05D009338 ORTHO05D010862 8.3e-30 133.3 78 89.7
Dinv42107 Davidia involucrata HOM05D004625 ORTHO05D006054 4.1e-13 77.8 78 57.7
Gohir.A03G214000 Gossypium hirsutum HOM05D009338 ORTHO05D010862 5.0e-11 70.9 83 51.8
Rhsim11G0170900 Rhododendron simsii HOM05D009338 ORTHO05D010862 1.5e-10 69.3 84 53.6
Gohir.A03G213900 Gossypium hirsutum HOM05D009338 ORTHO05D010862 9.5e-10 66.6 82 50.0
Gorai.005G263600 Gossypium raimondii HOM05D009338 ORTHO05D010862 9.5e-10 66.6 83 50.6
Potri.009G109200 Populus trichocarpa HOM05D009338 ORTHO05D010862 9.5e-10 66.6 82 50.0
Thecc.02G028800 Theobroma cacao HOM05D009338 ORTHO05D010862 9.5e-10 66.6 82 48.8
Gohir.D02G235500 Gossypium hirsutum HOM05D009338 ORTHO05D010862 1.2e-09 66.2 83 49.4
Potri.004G148100 Populus trichocarpa HOM05D009338 ORTHO05D010862 6.2e-09 63.9 82 50.0
Gohir.D02G235400 Gossypium hirsutum HOM05D009338 ORTHO05D010862 8.0e-09 63.5 82 46.3
Thecc.02G028900 Theobroma cacao HOM05D009338 ORTHO05D010862 8.0e-09 63.5 81 50.6
Lalb_Chr01g0002981 Lupinus albus HOM05D016074 ORTHO05D010862 1.8e-08 62.4 78 50.0
Potri.004G147966 Populus trichocarpa HOM05D009338 ORTHO05D010862 1.8e-08 62.4 82 46.3
Haze_02460 Corylus avellana HOM05D009338 ORTHO05D010862 6.8e-08 60.5 80 50.0
TAR628G0903 Trochodendron aralioides HOM05D009338 ORTHO05D010862 1.2e-07 59.7 82 50.0
Gorai.005G263500 Gossypium raimondii HOM05D009338 ORTHO05D010862 1.5e-07 59.3 82 45.1
QL11p039270 Quercus lobata HOM05D009338 ORTHO05D010862 3.4e-07 58.2 83 50.6
Cfa004949 Carpinus fangiana HOM05D009338 ORTHO05D010862 4.4e-07 57.8 81 48.1
Sabra09G0083400 Salix brachista HOM05D009338 ORTHO05D010862 4.4e-07 57.8 83 47.0
Nitab4.5_0001361g0050 Nicotiana tabacum HOM05D013969 ORTHO05D016172 7.5e-07 57.0 88 45.5
Manes.17G096800 Manihot esculenta HOM05D009338 ORTHO05D010862 2.2e-06 55.5 80 46.2
Phvul.011G050200 Phaseolus vulgaris HOM05D016074 ORTHO05D010862 8.3e-06 53.5 81 46.9


User provided reference genes

Program Settings