Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0004525 Camellia sinensis var. sinensis HOM05D007259 ORTHO05D009158 7.0e-95 350.5 165 100.0
Actinidia36875 Actinidia chinensis HOM05D007259 ORTHO05D009158 2.7e-86 322.0 165 89.7
Rhsim08G0205600 Rhododendron simsii HOM05D007259 ORTHO05D009158 1.9e-84 315.8 165 87.9
Dinv21412 Davidia involucrata HOM05D007259 ORTHO05D009158 9.4e-84 313.5 163 85.9
Lj5A81T88 Lonicera japonica HOM05D007259 ORTHO05D009158 9.8e-81 303.5 163 84.7
Sopen06g025720 Solanum pennellii HOM05D007259 ORTHO05D009158 2.2e-80 302.4 163 82.8
CAN.G1932.2 Capsicum annuum HOM05D007259 ORTHO05D009158 2.8e-80 302.0 163 81.6
Peaxi162Scf00207g00430 Petunia axillaris HOM05D007259 ORTHO05D009158 8.3e-80 300.4 163 82.2
Lsat_1_v5_gn_5_8261 Lactuca sativa HOM05D007259 ORTHO05D009158 1.4e-79 299.7 163 81.6
VMungo0331G0163 Vigna mungo HOM05D007259 ORTHO05D009158 2.4e-79 298.9 165 81.2
PGSC0003DMG400028490 Solanum tuberosum HOM05D007259 ORTHO05D009158 3.1e-79 298.5 163 81.6
Solyc06g068470.3 Solanum lycopersicum HOM05D007259 ORTHO05D009158 5.4e-79 297.7 163 82.2
SGA_v2.0_scaffold26G11300 Striga asiatica HOM05D007259 ORTHO05D009158 1.6e-78 296.2 163 82.2
Medtr4g007095 Medicago truncatula HOM05D007259 ORTHO05D009158 2.0e-78 295.8 163 82.2
Hund00433 Selenicereus undatus HOM05D007259 ORTHO05D009158 2.0e-78 295.8 162 85.2
HanXRQChr05g0153761 Helianthus annuus HOM05D007259 ORTHO05D009158 2.7e-78 295.4 163 79.8
Eucgr.F03958 Eucalyptus grandis HOM05D007259 ORTHO05D009158 5.9e-78 294.3 163 81.6
Cc04_g05120 Coffea canephora HOM05D007259 ORTHO05D009158 7.7e-78 293.9 163 78.5
FvH4_6g28630 Fragaria vesca HOM05D007259 ORTHO05D009158 7.7e-78 293.9 163 82.2
FAN14G4954 Fragaria x ananassa HOM05D007259 ORTHO05D009158 7.7e-78 293.9 163 82.2
Ciclev10026584m.g Citrus clementina HOM05D007259 ORTHO05D009158 1.3e-77 293.1 163 82.2
PSO170G4635 Papaver somniferum HOM05D007259 ORTHO05D009158 1.3e-77 293.1 164 80.5
Potri.001G044200 Populus trichocarpa HOM05D007259 ORTHO05D009158 1.3e-77 293.1 163 81.0
Cfa001880 Carpinus fangiana HOM05D007259 ORTHO05D009158 2.2e-77 292.4 161 82.6
Glyma.08G218900 Glycine max HOM05D007259 ORTHO05D009158 2.2e-77 292.4 166 78.9
Gohir.D06G118700 Gossypium hirsutum HOM05D007259 ORTHO05D009158 2.9e-77 292.0 163 81.6
PSO017G0751 Papaver somniferum HOM05D007259 ORTHO05D009158 2.9e-77 292.0 164 80.5
RcHm_v2.0_Chr2g0132951 Rosa chinensis HOM05D007259 ORTHO05D009158 2.9e-77 292.0 163 81.6
TPR.G23079 Trifolium pratense HOM05D007259 ORTHO05D009158 2.9e-77 292.0 163 79.8
CANSAT56G1631 Cannabis sativa HOM05D007259 ORTHO05D009158 6.5e-77 290.8 163 81.0
Gorai.010G136500 Gossypium raimondii HOM05D007259 ORTHO05D009158 8.5e-77 290.4 162 81.5
Sabra01G0030500 Salix brachista HOM05D007259 ORTHO05D009158 8.5e-77 290.4 161 82.0
FAN05G5272 Fragaria x ananassa HOM05D007259 ORTHO05D009158 1.1e-76 290.0 163 81.0
Gohir.A06G114200 Gossypium hirsutum HOM05D007259 ORTHO05D009158 1.1e-76 290.0 163 81.0
PGR102G1952 Punica granatum HOM05D007259 ORTHO05D009158 1.1e-76 290.0 163 81.0
Duzib235G0063 Durio zibethinus HOM05D007259 ORTHO05D009158 2.5e-76 288.9 163 79.8
QL05p036089 Quercus lobata HOM05D007259 ORTHO05D009158 2.5e-76 288.9 163 82.8
MSTRG.4677 Avicennia marina HOM05D007259 ORTHO05D009158 3.2e-76 288.5 163 78.5
EL10Ac9g22206 Beta vulgaris HOM05D007259 ORTHO05D009158 4.2e-76 288.1 164 81.7
Oeu060130.1 Olea europaea HOM05D007259 ORTHO05D009158 4.2e-76 288.1 162 79.0
Lalb_Chr01g0012071 Lupinus albus HOM05D007259 ORTHO05D009158 7.2e-76 287.3 163 79.8
GSVIVG01015956001 Vitis vinifera HOM05D007259 ORTHO05D009158 7.2e-76 287.3 163 80.4
Medtr4g007090 Medicago truncatula HOM05D007259 ORTHO05D009158 9.4e-76 287.0 163 79.1
TPR.G23090 Trifolium pratense HOM05D007259 ORTHO05D009158 9.4e-76 287.0 163 79.8
Ah.01g006970 Amaranthus hybridus HOM05D007259 ORTHO05D009158 1.6e-75 286.2 162 81.5
Atru.chr10.2413 Acer truncatum HOM05D007259 ORTHO05D009158 3.6e-75 285.0 163 77.9
Lj3g0012869 Lotus japonicus HOM05D007259 ORTHO05D009158 3.6e-75 285.0 163 79.1
SalBow6G4962 Salvia bowleyana HOM05D007259 ORTHO05D009158 1.8e-74 282.7 163 74.8
Phvul.010G161400 Phaseolus vulgaris HOM05D007259 ORTHO05D009158 2.3e-74 282.3 165 75.8
Thecc.06G041800 Theobroma cacao HOM05D007259 ORTHO05D009158 3.0e-74 282.0 163 76.7
Manes.04G102300 Manihot esculenta HOM05D007259 ORTHO05D009158 4.0e-74 281.6 163 81.0
TWI75G0585 Tripterygium wilfordii HOM05D007259 ORTHO05D009158 4.0e-74 281.6 163 77.9
FAN09G1653 Fragaria x ananassa HOM05D007259 ORTHO05D009158 5.2e-74 281.2 162 80.9
Prupe.3G098300 Prunus persica HOM05D007259 ORTHO05D009158 8.8e-74 280.4 162 79.6
Sc12g0008330 Simmondsia chinensis HOM05D007259 ORTHO05D009158 1.2e-73 280.0 161 77.6
BcaC03g15926 Brassica carinata HOM05D007259 ORTHO05D009158 1.5e-73 279.6 163 76.7
BolC2t09700H Brassica oleracea HOM05D007259 ORTHO05D009158 1.5e-73 279.6 163 76.7
Sp5g34900 Schrenkiella parvula HOM05D007259 ORTHO05D009158 2.6e-73 278.9 161 78.9
C02p36870 Brassica napus HOM05D007259 ORTHO05D009158 3.4e-73 278.5 163 76.1
Carub.0002s2668 Capsella rubella HOM05D007259 ORTHO05D009158 3.4e-73 278.5 163 77.3
BcaB05g25221 Brassica carinata HOM05D007259 ORTHO05D009158 9.8e-73 276.9 163 76.1
ClCG10G012930 Citrullus lanatus HOM05D007259 ORTHO05D009158 9.8e-73 276.9 162 77.8
A02p23100 Brassica napus HOM05D007259 ORTHO05D009158 1.3e-72 276.6 163 76.1
BraA02t07308Z Brassica rapa HOM05D007259 ORTHO05D009158 1.3e-72 276.6 163 76.1
Migut.D01126 Erythranthe guttata HOM05D007259 ORTHO05D009158 1.3e-72 276.6 164 75.6
Thhalv10019243m.g Eutrema salsugineum HOM05D007259 ORTHO05D009158 6.3e-72 274.2 161 77.6
Psat7g260280 Pisum sativum HOM05D007259 ORTHO05D009158 8.3e-72 273.9 158 80.4
Aa31LG4G1140 Aethionema arabicum HOM05D007259 ORTHO05D009158 2.4e-71 272.3 163 76.1
AL2G40530 Arabidopsis lyrata HOM05D007259 ORTHO05D009158 2.4e-71 272.3 163 77.3
THA.LOC104812409 Tarenaya hassleriana HOM05D007259 ORTHO05D009158 3.1e-71 271.9 163 78.5
AT1G80860 Arabidopsis thaliana HOM05D007259 ORTHO05D009158 4.1e-71 271.6 163 76.1
CsaV3_3G032790 Cucumis sativus L. HOM05D007259 ORTHO05D009158 5.4e-71 271.2 162 76.5
Nn8g39898 Nelumbo nucifera HOM05D007259 ORTHO05D009158 1.6e-70 269.6 163 74.8
CARHR073610 Cardamine hirsuta HOM05D007259 ORTHO05D009158 2.7e-70 268.9 163 76.7
CiPaw.01G254600 Carya illinoinensis HOM05D007259 ORTHO05D009158 2.7e-70 268.9 161 77.6
Nitab4.5_0008962g0030 Nicotiana tabacum HOM05D007259 ORTHO05D009158 1.3e-69 266.5 144 83.3
MBI15_g08512_MAGBIO Magnolia biondii HOM05D007259 ORTHO05D009158 1.1e-68 263.5 162 74.1
Sed0006537 Sechium edule HOM05D007259 ORTHO05D009158 8.0e-67 257.3 162 72.8
unitig_60.g25615 Utricularia gibba HOM05D007259 ORTHO05D009158 1.5e-65 253.1 199 60.3
BcaB05g25224 Brassica carinata HOM05D007259 ORTHO05D009158 4.9e-64 248.1 163 71.8
Haze_16667 Corylus avellana HOM05D007259 ORTHO05D009158 6.6e-61 237.7 258 49.6
Os02g0612100 Oryza sativa ssp. japonica HOM05D007259 ORTHO05D009158 8.6e-61 237.3 162 69.1
ECA246G0776 Erigeron canadensis HOM05D007259 ORTHO05D009158 1.5e-60 236.5 124 86.3
Zm00001eb184520 Zea mays HOM05D007259 ORTHO05D009158 5.6e-60 234.6 157 68.8
Potri.003G182400 Populus trichocarpa HOM05D007259 ORTHO05D009158 4.1e-55 218.4 117 84.6
CDE12G0386 Ceratophyllum demersum HOM05D007259 ORTHO05D009158 1.7e-53 213.0 141 68.8
DCAR_021369 Daucus carota HOM05D007259 ORTHO05D009158 7.3e-52 207.6 107 86.0
HPP92_010735 Vanilla planifolia HOM05D007259 ORTHO05D009158 7.3e-52 207.6 161 60.2
SEGI_39537 Sequoiadendron giganteum HOM05D007259 ORTHO05D009158 9.5e-52 207.2 159 60.4
AagrBONN_evm.TU.Sc2ySwM_117.1157 Anthoceros agrestis HOM05D007259 ORTHO05D009158 5.8e-49 198.0 155 58.7
SMO141G0127 Selaginella moellendorffii HOM05D007259 ORTHO05D009158 4.1e-47 191.8 159 55.3
Pp3c6_3720 Physcomitrium patens HOM05D007259 ORTHO05D009158 4.3e-44 181.8 159 53.5
vmacro19057 Vaccinium macrocarpon HOM05D007259 ORTHO05D009158 9.2e-39 164.1 84 91.7
Aqoxy2G00331 Aquilegia oxysepala HOM05D001307 ORTHO05D001158 8.6e-37 157.5 91 78.0
Glyma.07G022900 Glycine max HOM05D007259 ORTHO05D009158 4.3e-36 155.2 84 82.1
MD17G1223400 Malus domestica HOM05D007259 ORTHO05D009158 5.6e-36 154.8 80 87.5
Nitab4.5_0000886g0050 Nicotiana tabacum HOM05D007259 ORTHO05D009158 2.8e-35 152.5 91 71.4
MD17G1223600 Malus domestica HOM05D007259 ORTHO05D009158 5.2e-34 148.3 83 78.3
Lj5C80T7 Lonicera japonica HOM05D007259 ORTHO05D009158 1.5e-33 146.7 82 81.7
FAN02G2583 Fragaria x ananassa HOM05D007259 ORTHO05D009158 3.8e-32 142.1 82 76.8
ATR0739G058 Amborella trichopoda HOM05D007259 ORTHO05D009158 9.3e-31 137.5 84 75.0
Cpa.g.sc10.78 Carica papaya HOM05D007259 ORTHO05D009158 9.3e-31 137.5 82 73.2
MELO3C026739.2 Cucumis melo HOM05D007259 ORTHO05D009158 3.6e-27 125.6 82 68.3
HPP92_010738 Vanilla planifolia HOM05D007259 ORTHO05D009158 4.0e-26 122.1 94 62.8
SalBow8G2481 Salvia bowleyana HOM05D007259 ORTHO05D009158 8.1e-19 97.8 71 70.4
COL.COLO4_26703 Corchorus olitorius HOM05D007259 ORTHO05D009158 6.0e-14 81.6 43 83.7


User provided reference genes

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