Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0004518 Camellia sinensis var. sinensis HOM05D006541 ORTHO05D008471 7.2e-209 730.3 369 100.0
CSS0042048 Camellia sinensis var. sinensis HOM05D006541 ORTHO05D008471 9.2e-188 660.2 392 87.8
Dinv38701 Davidia involucrata HOM05D006541 ORTHO05D008471 1.6e-160 569.7 420 71.4
Rhsim08G0155500 Rhododendron simsii HOM05D006541 ORTHO05D008471 4.6e-147 525.0 363 74.7
Lj5A111T86 Lonicera japonica HOM05D006541 ORTHO05D008471 1.6e-144 516.5 391 68.8
GSVIVG01008019001 Vitis vinifera HOM05D006541 ORTHO05D008471 8.1e-144 514.2 420 64.5
Hma1.2p1_0104F.1_g049970 Hydrangea macrophylla HOM05D006541 ORTHO05D008471 2.2e-141 506.1 372 71.2
TAR629G1448 Trochodendron aralioides HOM05D006541 ORTHO05D008471 6.4e-141 504.6 416 62.5
Cfa018953 Carpinus fangiana HOM05D006541 ORTHO05D008471 8.7e-138 494.2 399 66.4
QL10p016702 Quercus lobata HOM05D006541 ORTHO05D008471 4.3e-137 491.9 432 62.7
Atru.chr9.2260 Acer truncatum HOM05D006541 ORTHO05D008471 9.6e-137 490.7 405 65.2
TAR371G1054 Trochodendron aralioides HOM05D006541 ORTHO05D008471 1.3e-136 490.3 387 64.3
TWI60G0844 Tripterygium wilfordii HOM05D006541 ORTHO05D008471 8.2e-136 487.6 401 65.1
Duzib205G0457 Durio zibethinus HOM05D006541 ORTHO05D008471 1.8e-135 486.5 404 63.9
Nn4g23149 Nelumbo nucifera HOM05D006541 ORTHO05D008471 1.8e-135 486.5 416 60.6
Gohir.A03G066400 Gossypium hirsutum HOM05D006541 ORTHO05D008471 6.9e-135 484.6 400 64.8
Eucgr.B00491 Eucalyptus grandis HOM05D006541 ORTHO05D008471 1.9e-132 476.5 422 61.8
Prupe.5G192200 Prunus persica HOM05D006541 ORTHO05D008471 2.5e-132 476.1 425 60.0
Oeu006508.1 Olea europaea HOM05D006541 ORTHO05D008471 9.3e-132 474.2 380 66.3
CiPaw.11G043400 Carya illinoinensis HOM05D006541 ORTHO05D008471 2.1e-131 473.0 387 64.6
VMungo1215G1397 Vigna mungo HOM05D006541 ORTHO05D008471 2.1e-131 473.0 430 60.5
Sc12g0006320 Simmondsia chinensis HOM05D006541 ORTHO05D008471 2.7e-131 472.6 401 64.1
Gorai.003G096900 Gossypium raimondii HOM05D006541 ORTHO05D008471 7.9e-131 471.1 439 59.5
MBI05_g08285_MAGBIO Magnolia biondii HOM05D006541 ORTHO05D008471 7.9e-131 471.1 421 58.9
Actinidia37633 Actinidia chinensis HOM05D006541 ORTHO05D008471 1.0e-130 470.7 388 66.0
Phvul.003G190700 Phaseolus vulgaris HOM05D006541 ORTHO05D008471 1.8e-130 469.9 399 63.9
Glyma.17G099300 Glycine max HOM05D006541 ORTHO05D008471 3.9e-130 468.8 431 59.9
MD14G1199100 Malus domestica HOM05D006541 ORTHO05D008471 5.1e-130 468.4 425 58.4
Lj4g0004556 Lotus japonicus HOM05D006541 ORTHO05D008471 1.1e-129 467.2 395 63.0
Psat4g051480 Pisum sativum HOM05D006541 ORTHO05D008471 1.1e-129 467.2 436 59.6
Cc04_g16740 Coffea canephora HOM05D006541 ORTHO05D008471 1.5e-129 466.8 382 65.4
Ciclev10020397m.g Citrus clementina HOM05D006541 ORTHO05D008471 1.9e-129 466.5 409 61.4
Lalb_Chr07g0178001 Lupinus albus HOM05D006541 ORTHO05D008471 2.5e-129 466.1 388 63.9
Hund02657 Selenicereus undatus HOM05D006541 ORTHO05D008471 5.7e-129 464.9 413 61.3
arahy.Tifrunner.gnm1.ann1.84ES4F Arachis hypogaea HOM05D006541 ORTHO05D008471 7.4e-129 464.5 400 62.0
Thecc.03G085100 Theobroma cacao HOM05D006541 ORTHO05D008471 7.4e-129 464.5 395 63.3
arahy.Tifrunner.gnm1.ann1.ZY6HCY Arachis hypogaea HOM05D006541 ORTHO05D008471 1.3e-128 463.8 400 62.0
AUR62021701 Chenopodium quinoa HOM05D006541 ORTHO05D008471 2.8e-128 462.6 414 59.4
PSO063G0566 Papaver somniferum HOM05D006541 ORTHO05D008471 8.2e-128 461.1 382 62.3
AUR62008395 Chenopodium quinoa HOM05D006541 ORTHO05D008471 1.1e-127 460.7 414 59.4
Nitab4.5_0000842g0050 Nicotiana tabacum HOM05D006541 ORTHO05D008471 1.4e-127 460.3 435 57.9
MSTRG.11386 Avicennia marina HOM05D006541 ORTHO05D008471 1.8e-127 459.9 380 65.5
Nitab4.5_0012137g0020 Nicotiana tabacum HOM05D006541 ORTHO05D008471 9.0e-127 457.6 435 57.0
CAN.G837.10 Capsicum annuum HOM05D006541 ORTHO05D008471 2.0e-126 456.4 434 57.6
Gohir.D03G093000 Gossypium hirsutum HOM05D006541 ORTHO05D008471 2.6e-126 456.1 406 61.8
PGR083G1696 Punica granatum HOM05D006541 ORTHO05D008471 2.6e-126 456.1 418 59.6
TPR.G34732 Trifolium pratense HOM05D006541 ORTHO05D008471 7.7e-126 454.5 439 58.1
Peaxi162Scf00274g00732 Petunia axillaris HOM05D006541 ORTHO05D008471 1.0e-125 454.1 435 58.4
Medtr4g108590 Medicago truncatula HOM05D006541 ORTHO05D008471 2.9e-125 452.6 436 58.3
Ca_21826_v3 Cicer arietinum L. HOM05D006541 ORTHO05D008471 5.0e-125 451.8 400 61.8
RcHm_v2.0_Chr7g0181151 Rosa chinensis HOM05D006541 ORTHO05D008471 1.9e-124 449.9 430 59.3
Aqoxy3G03367 Aquilegia oxysepala HOM05D006541 ORTHO05D008471 5.5e-124 448.4 420 57.6
Solyc03g116140.3 Solanum lycopersicum HOM05D006541 ORTHO05D008471 5.5e-124 448.4 400 60.0
Sopen03g035110 Solanum pennellii HOM05D006541 ORTHO05D008471 1.2e-123 447.2 400 59.5
MD06G1192400 Malus domestica HOM05D006541 ORTHO05D008471 2.7e-123 446.0 452 54.4
Ah.11g048540 Amaranthus hybridus HOM05D006541 ORTHO05D008471 3.6e-123 445.7 414 59.7
DCAR_016545 Daucus carota HOM05D006541 ORTHO05D008471 2.3e-122 443.0 382 61.0
Lsat_1_v5_gn_1_13281 Lactuca sativa HOM05D006541 ORTHO05D008471 3.9e-122 442.2 382 61.8
HanXRQChr02g0041061 Helianthus annuus HOM05D006541 ORTHO05D008471 2.5e-121 439.5 384 61.5
THA.LOC104821445 Tarenaya hassleriana HOM05D006541 ORTHO05D008471 2.8e-120 436.0 423 57.0
FAN18G0374 Fragaria x ananassa HOM05D006541 ORTHO05D008471 1.1e-119 434.1 432 57.4
FAN04G2599 Fragaria x ananassa HOM05D006541 ORTHO05D008471 9.1e-119 431.0 429 57.6
SGA_v2.0_scaffold25G10913 Striga asiatica HOM05D006541 ORTHO05D008471 2.0e-118 429.9 386 60.6
Migut.I00173 Erythranthe guttata HOM05D006541 ORTHO05D008471 5.9e-118 428.3 380 62.4
PGSC0003DMG400019513 Solanum tuberosum HOM05D006541 ORTHO05D008471 2.2e-117 426.4 400 57.8
Thhalv10010423m.g Eutrema salsugineum HOM05D006541 ORTHO05D008471 2.9e-117 426.0 410 58.8
CANSAT25G3319 Cannabis sativa HOM05D006541 ORTHO05D008471 6.5e-117 424.9 415 56.1
Haze_07335 Corylus avellana HOM05D006541 ORTHO05D008471 6.5e-117 424.9 382 61.5
FAN08G2919 Fragaria x ananassa HOM05D006541 ORTHO05D008471 1.9e-116 423.3 430 57.2
EL10Ac5g10987 Beta vulgaris HOM05D006541 ORTHO05D008471 3.2e-116 422.5 386 58.5
AL5G26900 Arabidopsis lyrata HOM05D006541 ORTHO05D008471 5.5e-116 421.8 413 58.4
AT3G47610 Arabidopsis thaliana HOM05D006541 ORTHO05D008471 2.7e-115 419.5 413 58.1
Carub.0005s1374 Capsella rubella HOM05D006541 ORTHO05D008471 6.1e-115 418.3 413 57.6
Sp5g14300 Schrenkiella parvula HOM05D006541 ORTHO05D008471 6.1e-115 418.3 407 58.7
FvH4_5g15050 Fragaria vesca HOM05D006541 ORTHO05D008471 7.9e-115 417.9 432 56.2
CARHR156290 Cardamine hirsuta HOM05D006541 ORTHO05D008471 1.1e-113 414.1 407 57.2
BolC3t19470H Brassica oleracea HOM05D006541 ORTHO05D008471 1.5e-113 413.7 407 57.2
Sabra12G0049100 Salix brachista HOM05D006541 ORTHO05D008471 9.7e-113 411.0 467 52.7
A06p20010 Brassica napus HOM05D006541 ORTHO05D008471 1.7e-112 410.2 407 57.7
BraA06t25087Z Brassica rapa HOM05D006541 ORTHO05D008471 1.7e-112 410.2 407 57.7
HPP92_016797 Vanilla planifolia HOM05D006541 ORTHO05D008471 2.2e-112 409.8 398 57.0
BcaB01g00902 Brassica carinata HOM05D006541 ORTHO05D008471 1.4e-111 407.1 386 58.5
HPP92_016827 Vanilla planifolia HOM05D006541 ORTHO05D008471 1.4e-111 407.1 398 56.8
Potri.012G068900 Populus trichocarpa HOM05D006541 ORTHO05D008471 2.4e-111 406.4 389 58.9
BcaC01g01798 Brassica carinata HOM05D006541 ORTHO05D008471 5.3e-111 405.2 407 56.5
C03p71820 Brassica napus HOM05D006541 ORTHO05D008471 5.3e-111 405.2 407 56.5
unitig_0.g2528 Utricularia gibba HOM05D006541 ORTHO05D008471 5.3e-111 405.2 382 57.1
CDE06G2127 Ceratophyllum demersum HOM05D006541 ORTHO05D008471 5.9e-110 401.7 429 52.7
COL.COLO4_24520 Corchorus olitorius HOM05D000087 ORTHO05D008471 1.0e-109 401.0 387 59.2
ECA247G0129 Erigeron canadensis HOM05D006541 ORTHO05D008471 1.9e-108 396.7 382 55.8
Manes.06G093400 Manihot esculenta HOM05D006541 ORTHO05D008471 2.5e-108 396.4 360 61.9
Actinidia04898 Actinidia chinensis HOM05D006541 ORTHO05D008471 3.2e-108 396.0 249 82.7
Hma1.2p1_0104F.1_g049980 Hydrangea macrophylla HOM05D006541 ORTHO05D008471 6.1e-107 391.7 331 64.4
ClCG04G012330 Citrullus lanatus HOM05D006541 ORTHO05D008471 1.0e-106 391.0 381 57.5
Cpa.g.c35819 Carica papaya HOM05D006541 ORTHO05D008471 3.0e-106 389.4 367 58.6
vmacro17549 Vaccinium macrocarpon HOM05D006541 ORTHO05D008471 2.6e-105 386.3 407 55.3
CsaV3_1G005390 Cucumis sativus L. HOM05D006541 ORTHO05D008471 2.0e-102 376.7 373 55.8
MELO3C001974.2 Cucumis melo HOM05D006541 ORTHO05D008471 7.7e-102 374.8 365 56.4
BcaB05g23063 Brassica carinata HOM05D006541 ORTHO05D008471 2.2e-101 373.2 400 53.2
ATR0598G034 Amborella trichopoda HOM05D006541 ORTHO05D008471 9.4e-100 367.9 401 53.6
Sed0004898 Sechium edule HOM05D006541 ORTHO05D008471 8.0e-99 364.8 338 56.5
Aa31LG4G16360 Aethionema arabicum HOM05D006541 ORTHO05D008471 1.9e-92 343.6 455 47.5
Zm00001eb312480 Zea mays HOM05D006541 ORTHO05D008471 2.8e-75 286.6 277 58.5
Pp3c16_180 Physcomitrium patens HOM05D006541 ORTHO05D003603 5.6e-68 262.3 389 40.6
Pp3c16_188 Physcomitrium patens HOM05D006541 ORTHO05D003603 5.6e-68 262.3 389 40.6
Mapoly0060s0059 Marchantia polymorpha HOM05D006541 ORTHO05D003603 1.2e-67 261.2 270 50.7
SEGI_30902 Sequoiadendron giganteum HOM05D006541 ORTHO05D008471 4.7e-67 259.2 335 46.9
AagrBONN_evm.TU.Sc2ySwM_228.4960 Anthoceros agrestis HOM05D006541 ORTHO05D008471 4.1e-63 246.1 399 39.8
Potri.003G168100 Populus trichocarpa HOM05D006541 ORTHO05D008471 6.0e-54 215.7 143 74.8
Actinidia04899 Actinidia chinensis HOM05D006541 ORTHO05D008471 3.5e-30 136.7 87 75.9
CBR_g8828 Chara braunii HOM05D003341 ORTHO05D003603 3.9e-29 133.3 304 33.2
SEGI_16548 Sequoiadendron giganteum HOM05D003341 ORTHO05D003603 1.3e-27 128.3 297 34.0
Cpa.g.sc111.3 Carica papaya HOM05D006541 ORTHO05D008471 1.3e-24 118.2 92 62.0
Os09g0413100 Oryza sativa ssp. japonica HOM05D006541 ORTHO05D008471 2.2e-16 90.9 178 33.7
vmacro17551 Vaccinium macrocarpon HOM05D006541 ORTHO05D000277 6.5e-16 89.4 83 62.7
Haze_07334 Corylus avellana HOM05D006541 ORTHO05D008471 3.5e-14 83.6 52 76.9
MELO3C035773.2 Cucumis melo HOM05D006541 ORTHO05D008471 2.3e-13 80.9 50 74.0
CsaV3_1G005410 Cucumis sativus L. HOM05D006541 ORTHO05D008471 2.3e-13 80.9 50 74.0
FAN09G1066 Fragaria x ananassa HOM05D007752 ORTHO05D009994 1.1e-10 72.0 154 40.3
Cre09.g412350 Chlamydomonas reinhardtii HOM05D003341 ORTHO05D003603 9.0e-10 68.9 126 37.3
Sed0007979 Sechium edule HOM05D006541 ORTHO05D008471 1.3e-08 65.1 59 49.2
SEGI_20393 Sequoiadendron giganteum HOM05D006541 ORTHO05D008471 2.9e-08 63.9 45 62.2
PRCOL_00002459 Prasinoderma coloniale HOM05D006541 ORTHO05D008471 3.8e-08 63.5 128 34.4
FAN14G0637 Fragaria x ananassa HOM05D006541 ORTHO05D008471 3.2e-07 60.5 98 44.9


User provided reference genes

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