Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0004472 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 6.1e-97 357.5 178 100.0
CSS0005008 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 3.0e-43 179.1 178 56.2
CSS0045933 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 9.3e-37 157.5 137 66.4
CSS0003705 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 5.7e-34 148.3 130 64.6
CSS0019089 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 1.9e-26 123.2 93 66.7
CSS0039307 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.3e-26 122.5 125 56.0
CSS0018430 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.4e-24 117.1 112 56.2
CSS0008160 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 1.8e-24 116.7 96 62.5
CSS0043832 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 1.2e-23 114.0 96 62.5
CSS0004175 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 1.5e-23 113.6 96 62.5
CSS0029205 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 1.5e-23 113.6 96 62.5
CSS0036809 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 1.5e-23 113.6 96 62.5
CSS0042827 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 1.5e-23 113.6 96 62.5
CSS0016236 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 2.2e-22 109.8 96 62.5
CSS0024446 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 6.5e-22 108.2 122 49.2
CSS0036689 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 1.9e-21 106.7 95 62.1
CSS0049146 Camellia sinensis var. sinensis HOM05D007103 ORTHO05D008948 3.2e-21 105.9 125 48.0
CSS0022157 Camellia sinensis var. sinensis HOM05D000082 ORTHO05D012079 7.2e-21 104.8 111 55.0
CSS0010354 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 2.7e-20 102.8 112 53.6
CSS0032039 Camellia sinensis var. sinensis HOM05D000084 ORTHO05D012079 2.3e-19 99.8 143 46.9
CSS0048981 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 7.4e-18 94.7 96 55.2
CSS0022512 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 2.2e-17 93.2 99 55.6
CSS0009117 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 1.9e-13 80.1 99 48.5
vmacro20693 Vaccinium macrocarpon HOM05D010253 ORTHO05D015231 3.2e-13 79.3 113 40.7
CSS0010281 Camellia sinensis var. sinensis HOM05D000084 ORTHO05D012079 2.7e-12 76.3 96 46.9
CSS0029947 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 2.6e-10 69.7 53 64.2
Actinidia04037 Actinidia chinensis HOM05D000004 ORTHO05D000034 9.7e-10 67.8 128 32.0
CSS0001091 Camellia sinensis var. sinensis HOM05D039892 ORTHO05D013815 1.7e-09 67.0 53 62.3
vmacro12874 Vaccinium macrocarpon HOM05D002341 ORTHO05D015231 2.2e-09 66.6 142 31.7
CSS0041871 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.7e-09 65.9 78 50.0
Hma1.2p1_0381F.1_g140020 Hydrangea macrophylla HOM05D000004 ORTHO05D000224 3.7e-09 65.9 96 37.5
Rhsim03G0130600 Rhododendron simsii HOM05D000004 ORTHO05D000034 4.8e-09 65.5 141 31.2
CSS0001990 Camellia sinensis var. sinensis HOM05D007534 ORTHO05D012079 1.1e-08 64.3 96 42.7
Cpa.g.sc1.420 Carica papaya HOM05D016211 ORTHO05D000224 5.3e-08 62.0 94 33.0
Rhsim02G0020600 Rhododendron simsii HOM05D000004 ORTHO05D000224 5.3e-08 62.0 141 29.8
Rhsim06G0134400 Rhododendron simsii HOM05D000004 ORTHO05D000034 7.0e-08 61.6 141 29.8
Rhsim07G0206500 Rhododendron simsii HOM05D000004 ORTHO05D000224 7.0e-08 61.6 141 29.8
Rhsim11G0017800 Rhododendron simsii HOM05D000004 ORTHO05D000224 7.0e-08 61.6 141 29.8
Ca_04081_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000224 1.2e-07 60.8 73 39.7
Rhsim11G0061300 Rhododendron simsii HOM05D000004 ORTHO05D000224 1.2e-07 60.8 141 29.8
Rhsim02G0129900 Rhododendron simsii HOM05D000004 ORTHO05D000224 1.6e-07 60.5 140 30.0
Rhsim08G0057000 Rhododendron simsii HOM05D000004 ORTHO05D000224 2.6e-07 59.7 140 29.3
Rhsim06G0111500 Rhododendron simsii HOM05D000002 ORTHO05D000047 5.9e-07 58.5 140 29.3
Rhsim10G0111100 Rhododendron simsii HOM05D000004 ORTHO05D000224 5.9e-07 58.5 140 29.3
Rhsim10G0111300 Rhododendron simsii HOM05D000004 ORTHO05D000224 5.9e-07 58.5 140 29.3
Ca_23935_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000224 7.7e-07 58.2 101 35.6
Rhsim04G0149400 Rhododendron simsii HOM05D000004 ORTHO05D000224 7.7e-07 58.2 141 28.4
CSS0011436 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000224 2.2e-06 56.6 87 35.6
PSO832G2906 Papaver somniferum HOM05D000004 ORTHO05D000224 2.2e-06 56.6 131 29.8
PGR068G0002 Punica granatum HOM05D000004 ORTHO05D000034 2.2e-06 56.6 134 29.9
Rhsim07G0101500 Rhododendron simsii HOM05D000004 ORTHO05D000224 2.2e-06 56.6 140 30.7
PGR096G0003 Punica granatum HOM05D000004 ORTHO05D000002 5.0e-06 55.5 134 29.9
CSS0030144 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 6.5e-06 55.1 77 45.5
QL04p087838 Quercus lobata HOM05D000004 ORTHO05D000002 6.5e-06 55.1 133 31.6
Rhsim11G0056300 Rhododendron simsii HOM05D000004 ORTHO05D000224 6.5e-06 55.1 121 33.9
FvH4_3g34551 Fragaria vesca HOM05D008371 ORTHO05D000224 8.5e-06 54.7 89 34.8
Sopen12g025570 Solanum pennellii HOM05D000004 ORTHO05D000034 8.5e-06 54.7 87 35.6


User provided reference genes

Program Settings