Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0004466 Camellia sinensis var. sinensis HOM05D006932 ORTHO05D009616 1.1e-104 383.3 184 100.0
Actinidia37937 Actinidia chinensis HOM05D006932 ORTHO05D009616 1.3e-49 200.3 125 81.6
Dinv31864 Davidia involucrata HOM05D006932 ORTHO05D009616 3.2e-48 195.7 137 75.9
GSVIVG01009938001 Vitis vinifera HOM05D006932 ORTHO05D009616 5.6e-45 184.9 136 71.3
MD08G1010800 Malus domestica HOM05D006932 ORTHO05D009616 3.7e-44 182.2 130 72.3
FvH4_2g38240 Fragaria vesca HOM05D006932 ORTHO05D009616 1.8e-43 179.9 174 60.3
FAN15G2452 Fragaria x ananassa HOM05D006932 ORTHO05D009616 3.1e-43 179.1 127 74.0
TAR628G0089 Trochodendron aralioides HOM05D006932 ORTHO05D009616 3.1e-43 179.1 164 59.8
Prupe.1G363400 Prunus persica HOM05D006932 ORTHO05D009616 4.0e-43 178.7 125 73.6
RcHm_v2.0_Chr6g0303131 Rosa chinensis HOM05D006932 ORTHO05D009616 6.9e-43 177.9 125 76.0
FAN27G2636 Fragaria x ananassa HOM05D006932 ORTHO05D009616 1.5e-42 176.8 127 74.0
CiPaw.07G147900 Carya illinoinensis HOM05D006932 ORTHO05D009616 5.8e-42 174.9 124 74.2
Ciclev10003784m.g Citrus clementina HOM05D006932 ORTHO05D009616 1.4e-40 170.2 160 61.2
Gorai.009G193700 Gossypium raimondii HOM05D006932 ORTHO05D009616 1.4e-40 170.2 124 71.8
Nn5g30750 Nelumbo nucifera HOM05D006932 ORTHO05D009616 1.4e-40 170.2 124 71.0
CANSAT25G0116 Cannabis sativa HOM05D006932 ORTHO05D009616 1.9e-40 169.9 127 67.7
Gohir.D05G188400 Gossypium hirsutum HOM05D006932 ORTHO05D009616 4.2e-40 168.7 124 71.0
TWI56G1403 Tripterygium wilfordii HOM05D006932 ORTHO05D009616 5.5e-40 168.3 127 70.1
Gohir.A05G185600 Gossypium hirsutum HOM05D006932 ORTHO05D009616 7.1e-40 167.9 124 71.0
QL02p012013 Quercus lobata HOM05D006932 ORTHO05D009616 1.2e-39 167.2 124 71.8
Thecc.08G046600 Theobroma cacao HOM05D006932 ORTHO05D009616 1.2e-39 167.2 126 70.6
CsaV3_2G029620 Cucumis sativus L. HOM05D006932 ORTHO05D009616 2.7e-39 166.0 125 70.4
MELO3C011020.2 Cucumis melo HOM05D006932 ORTHO05D009616 3.5e-39 165.6 125 70.4
Lsat_1_v5_gn_2_12640 Lactuca sativa HOM05D006932 ORTHO05D009616 3.0e-38 162.5 119 70.6
Cc10_g01490 Coffea canephora HOM05D006932 ORTHO05D009616 5.1e-38 161.8 134 64.2
ClCG08G014220 Citrullus lanatus HOM05D006932 ORTHO05D009616 6.7e-38 161.4 125 68.8
Hund05180 Selenicereus undatus HOM05D006932 ORTHO05D009616 6.7e-38 161.4 125 70.4
Phvul.009G009500 Phaseolus vulgaris HOM05D006932 ORTHO05D009616 1.1e-37 160.6 128 69.5
Sed0011683 Sechium edule HOM05D006932 ORTHO05D009616 1.5e-37 160.2 128 66.4
Aqoxy5G01813 Aquilegia oxysepala HOM05D006932 ORTHO05D009616 1.9e-37 159.8 120 70.8
Glyma.06G023500 Glycine max HOM05D006932 ORTHO05D009616 1.9e-37 159.8 128 69.5
PSO170G2579 Papaver somniferum HOM05D006932 ORTHO05D009616 3.3e-37 159.1 119 71.4
PSO700G0201 Papaver somniferum HOM05D006932 ORTHO05D009616 3.3e-37 159.1 119 71.4
Duzib093G0008 Durio zibethinus HOM05D006932 ORTHO05D009616 5.7e-37 158.3 99 80.8
AL1G32860 Arabidopsis lyrata HOM05D006932 ORTHO05D009616 7.4e-37 157.9 120 70.0
AT1G20060 Arabidopsis thaliana HOM05D006932 ORTHO05D009616 7.4e-37 157.9 120 70.0
Carub.0001s1959 Capsella rubella HOM05D006932 ORTHO05D009616 7.4e-37 157.9 120 70.0
CAN.G6.34 Capsicum annuum HOM05D006932 ORTHO05D009616 7.4e-37 157.9 127 66.9
ECA238G0815 Erigeron canadensis HOM05D006932 ORTHO05D009616 7.4e-37 157.9 124 67.7
AUR62040551 Chenopodium quinoa HOM05D006932 ORTHO05D009616 9.6e-37 157.5 124 70.2
THA.LOC104811418 Tarenaya hassleriana HOM05D006932 ORTHO05D009616 1.3e-36 157.1 120 70.0
PGR031G2736 Punica granatum HOM05D006932 ORTHO05D009616 1.6e-36 156.8 124 66.9
FAN20G1755 Fragaria x ananassa HOM05D006932 ORTHO05D009616 2.1e-36 156.4 105 76.2
CARHR020530 Cardamine hirsuta HOM05D006932 ORTHO05D009616 2.8e-36 156.0 120 70.0
Lalb_Chr23g0266091 Lupinus albus HOM05D006932 ORTHO05D009616 4.8e-36 155.2 127 66.1
A07p16040 Brassica napus HOM05D006932 ORTHO05D009616 6.2e-36 154.8 120 67.5
BraA07t29332Z Brassica rapa HOM05D006932 ORTHO05D009616 6.2e-36 154.8 120 67.5
Lj1g0021590 Lotus japonicus HOM05D006932 ORTHO05D009616 8.2e-36 154.5 106 75.5
BcaB03g14335 Brassica carinata HOM05D006932 ORTHO05D009616 1.1e-35 154.1 120 67.5
BcaB03g14345 Brassica carinata HOM05D006932 ORTHO05D009616 1.1e-35 154.1 120 67.5
C07p23410 Brassica napus HOM05D006932 ORTHO05D009616 1.1e-35 154.1 120 67.5
Haze_22656 Corylus avellana HOM05D006932 ORTHO05D009616 1.1e-35 154.1 105 72.4
Potri.013G068501 Populus trichocarpa HOM05D006932 ORTHO05D009616 1.1e-35 154.1 118 66.9
Sp1g17820 Schrenkiella parvula HOM05D006932 ORTHO05D009616 1.1e-35 154.1 120 67.5
Psat0s2878g0080 Pisum sativum HOM05D006932 ORTHO05D009616 1.8e-35 153.3 128 65.6
Sopen08g012470 Solanum pennellii HOM05D006932 ORTHO05D009616 1.8e-35 153.3 120 69.2
Cpa.g.sc26.310 Carica papaya HOM05D006932 ORTHO05D009616 3.1e-35 152.5 118 70.3
Migut.C00855 Erythranthe guttata HOM05D006932 ORTHO05D009616 3.1e-35 152.5 120 67.5
TPR.G34552 Trifolium pratense HOM05D006932 ORTHO05D009616 6.9e-35 151.4 128 66.4
ATR0090G024 Amborella trichopoda HOM05D006932 ORTHO05D009616 9.0e-35 151.0 124 64.5
Sc15g0004860 Simmondsia chinensis HOM05D006932 ORTHO05D009616 1.5e-34 150.2 120 67.5
Lj6g0018015 Lotus japonicus HOM05D006932 ORTHO05D009616 2.0e-34 149.8 106 73.6
arahy.Tifrunner.gnm1.ann1.XXR9N9 Arachis hypogaea HOM05D006932 ORTHO05D009616 2.6e-34 149.4 134 63.4
arahy.Tifrunner.gnm1.ann1.Z8J4EM Arachis hypogaea HOM05D006932 ORTHO05D009616 2.6e-34 149.4 134 63.4
SalBow7G2156 Salvia bowleyana HOM05D006932 ORTHO05D009616 4.5e-34 148.7 118 69.5
Medtr3g113630 Medicago truncatula HOM05D006932 ORTHO05D009616 2.2e-33 146.4 128 65.6
HPP92_014539 Vanilla planifolia HOM05D006932 ORTHO05D009616 2.2e-33 146.4 119 64.7
SGA_v2.0_scaffold92G28210 Striga asiatica HOM05D006932 ORTHO05D009616 3.2e-32 142.5 120 65.0
Os02g0101800 Oryza sativa ssp. japonica HOM05D006932 ORTHO05D009616 5.5e-32 141.7 119 62.2
Zm00001eb210100 Zea mays HOM05D006932 ORTHO05D009616 1.3e-30 137.1 119 60.5
Prupe.8G272100 Prunus persica HOM05D006932 ORTHO05D009616 1.1e-29 134.0 91 75.8
Manes.18G012000 Manihot esculenta HOM05D006932 ORTHO05D009616 5.7e-29 131.7 124 59.7
RhsimUnG0065200 Rhododendron simsii HOM05D006932 ORTHO05D009616 9.7e-29 131.0 94 70.2
DCAR_019767 Daucus carota HOM05D002235 ORTHO05D006252 1.7e-25 120.2 118 57.6
Nitab4.5_0000337g0050 Nicotiana tabacum HOM05D006932 ORTHO05D009616 3.8e-25 119.0 137 55.5
Peaxi162Scf00553g00220 Petunia axillaris HOM05D006932 ORTHO05D009616 1.1e-24 117.5 127 55.1
HanXRQChr14g0431051 Helianthus annuus HOM05D006932 ORTHO05D009616 5.5e-24 115.2 123 59.3
SEGI_37211 Sequoiadendron giganteum HOM05D006932 ORTHO05D009616 7.2e-24 114.8 120 53.3
TAR376G0059 Trochodendron aralioides HOM05D006932 ORTHO05D009616 1.6e-23 113.6 87 66.7
VMungo1309G1702 Vigna mungo HOM05D006932 ORTHO05D009616 3.6e-23 112.5 122 58.2
EL10Ac1g02169 Beta vulgaris HOM05D006932 ORTHO05D009616 7.9e-23 111.3 108 58.3
COL.COLO4_26127 Corchorus olitorius HOM05D006932 ORTHO05D009616 1.4e-22 110.5 113 59.3
Nitab4.5_0003251g0090 Nicotiana tabacum HOM05D006932 ORTHO05D009616 1.8e-22 110.2 89 65.2
Thhalv10006798m.g Eutrema salsugineum HOM05D006932 ORTHO05D009616 2.3e-22 109.8 81 66.7
unitig_899.g15428 Utricularia gibba HOM05D006932 ORTHO05D009616 2.3e-22 109.8 112 58.9
BolC7t42874H Brassica oleracea HOM05D006932 ORTHO05D009616 8.8e-22 107.8 77 67.5
Ca_00838_v3 Cicer arietinum L. HOM05D006932 ORTHO05D009616 1.1e-21 107.5 123 55.3
Aa31LG7G4500 Aethionema arabicum HOM05D006932 ORTHO05D009616 1.3e-20 104.0 87 64.4
Solyc08g042030.3 Solanum lycopersicum HOM05D006932 ORTHO05D009616 2.2e-20 103.2 72 73.6
Lj4C22G4 Lonicera japonica HOM05D006932 ORTHO05D009616 6.1e-15 85.1 47 87.2
Eucgr.H00967 Eucalyptus grandis HOM05D006932 ORTHO05D009616 1.2e-10 70.9 118 40.7
AUR62041481 Chenopodium quinoa HOM05D006932 ORTHO05D009616 2.2e-09 66.6 70 57.1


User provided reference genes

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