Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0004451 Camellia sinensis var. sinensis HOM05D007090 ORTHO05D008993 3.9e-72 275.0 171 100.0
CSS0011917 Camellia sinensis var. sinensis HOM05D007090 ORTHO05D008993 8.3e-67 257.3 198 72.2
Actinidia22762 Actinidia chinensis HOM05D007090 ORTHO05D008993 4.1e-50 201.8 123 82.1
Actinidia22817 Actinidia chinensis HOM05D007090 ORTHO05D008993 4.1e-50 201.8 123 82.1
vmacro13441 Vaccinium macrocarpon HOM05D007090 ORTHO05D008993 7.8e-49 197.6 170 63.5
vmacro22435 Vaccinium macrocarpon HOM05D007090 ORTHO05D008993 7.8e-49 197.6 170 63.5
Rhsim07G0031100 Rhododendron simsii HOM05D007090 ORTHO05D008993 3.8e-43 178.7 153 71.2
GSVIVG01027682001 Vitis vinifera HOM05D007090 ORTHO05D008993 2.1e-41 172.9 172 62.8
Hma1.2p1_0005F.1_g004490 Hydrangea macrophylla HOM05D007090 ORTHO05D008993 5.1e-40 168.3 168 69.6
TAR375G0613 Trochodendron aralioides HOM05D007090 ORTHO05D008993 6.4e-35 151.4 162 51.9
Cc02_g24410 Coffea canephora HOM05D007090 ORTHO05D008993 7.1e-34 147.9 161 51.6
QL04p038719 Quercus lobata HOM05D007090 ORTHO05D008993 3.9e-32 142.1 163 47.2
Dinv44119 Davidia involucrata HOM05D007090 ORTHO05D008993 5.6e-31 138.3 103 70.9
Thecc.01G382600 Theobroma cacao HOM05D007090 ORTHO05D008993 3.6e-30 135.6 163 47.9
CiPaw.13G032600 Carya illinoinensis HOM05D007090 ORTHO05D008993 1.8e-29 133.3 163 45.4
Prupe.2G138200 Prunus persica HOM05D007090 ORTHO05D008993 4.0e-29 132.1 160 49.4
Duzib138G0673 Durio zibethinus HOM05D007090 ORTHO05D008993 6.9e-29 131.3 163 59.5
HanXRQChr03g0088131 Helianthus annuus HOM05D007090 ORTHO05D008993 1.5e-28 130.2 169 46.7
Lsat_1_v5_gn_4_45521 Lactuca sativa HOM05D007090 ORTHO05D008993 4.5e-28 128.6 169 47.9
Potri.014G060700 Populus trichocarpa HOM05D007090 ORTHO05D008993 4.5e-28 128.6 160 46.9
MSTRG.4910 Avicennia marina HOM05D007090 ORTHO05D008993 7.6e-28 127.9 164 46.3
Migut.N01613 Erythranthe guttata HOM05D007090 ORTHO05D008993 7.6e-28 127.9 161 45.3
Sabra14G0044500 Salix brachista HOM05D007090 ORTHO05D008993 1.3e-27 127.1 160 56.9
Sc26g0001310 Simmondsia chinensis HOM05D007090 ORTHO05D008993 1.7e-27 126.7 162 45.7
ECA234G0545 Erigeron canadensis HOM05D007090 ORTHO05D008993 3.8e-27 125.6 163 48.5
Nn1g01037 Nelumbo nucifera HOM05D007090 ORTHO05D008993 3.8e-27 125.6 170 52.9
Manes.05G048800 Manihot esculenta HOM05D007090 ORTHO05D008993 4.9e-27 125.2 160 46.2
TWI23G0238 Tripterygium wilfordii HOM05D007090 ORTHO05D008993 4.9e-27 125.2 161 61.5
Atru.chr5.252 Acer truncatum HOM05D007090 ORTHO05D008993 1.1e-26 124.0 161 45.3
COL.COLO4_12490 Corchorus olitorius HOM05D007090 ORTHO05D008993 1.4e-26 123.6 160 43.8
Gohir.D11G083500 Gossypium hirsutum HOM05D007090 ORTHO05D008993 4.2e-26 122.1 163 44.8
Gorai.007G089100 Gossypium raimondii HOM05D007090 ORTHO05D008993 7.1e-26 121.3 163 54.0
Peaxi162Scf00803g00118 Petunia axillaris HOM05D007090 ORTHO05D008993 7.1e-26 121.3 133 49.6
TPR.G4946 Trifolium pratense HOM05D007090 ORTHO05D008993 2.1e-25 119.8 163 44.2
Hund17045 Selenicereus undatus HOM05D007090 ORTHO05D008993 2.7e-25 119.4 159 43.4
Nitab4.5_0008963g0010 Nicotiana tabacum HOM05D007090 ORTHO05D008993 4.6e-25 118.6 133 50.4
Eucgr.E01513 Eucalyptus grandis HOM05D007090 ORTHO05D008993 6.0e-25 118.2 163 43.6
Ca_19835_v3 Cicer arietinum L. HOM05D007090 ORTHO05D008993 1.8e-24 116.7 165 43.0
Oeu051923.2 Olea europaea HOM05D007090 ORTHO05D008993 1.8e-24 116.7 144 48.6
Glyma.03G032000 Glycine max HOM05D007090 ORTHO05D008993 3.9e-24 115.5 161 42.2
Psat7g236160 Pisum sativum HOM05D007090 ORTHO05D008993 3.9e-24 115.5 166 42.2
SGA_v2.0_scaffold11G05536 Striga asiatica HOM05D007090 ORTHO05D008993 5.1e-24 115.2 162 42.0
RcHm_v2.0_Chr1g0349121 Rosa chinensis HOM05D007090 ORTHO05D008993 8.7e-24 114.4 153 48.4
CAN.G1469.17 Capsicum annuum HOM05D007090 ORTHO05D008993 1.1e-23 114.0 175 50.3
CANSAT56G0199 Cannabis sativa HOM05D007090 ORTHO05D008993 1.9e-23 113.2 160 40.0
CANSAT56G4322 Cannabis sativa HOM05D007090 ORTHO05D008993 1.9e-23 113.2 160 40.0
Nitab4.5_0000859g0240 Nicotiana tabacum HOM05D007090 ORTHO05D008993 4.3e-23 112.1 175 41.1
DCAR_015886 Daucus carota HOM05D007090 ORTHO05D008993 5.6e-23 111.7 118 54.2
Aqoxy5G03901 Aquilegia oxysepala HOM05D007090 ORTHO05D008993 9.6e-23 110.9 158 42.4
Medtr4g026500 Medicago truncatula HOM05D007090 ORTHO05D008993 1.3e-22 110.5 166 41.0
FvH4_7g11100 Fragaria vesca HOM05D007090 ORTHO05D008993 1.6e-22 110.2 153 46.4
FAN10G4025 Fragaria x ananassa HOM05D007090 ORTHO05D008993 3.7e-22 109.0 153 45.1
MD02G1210400 Malus domestica HOM05D007090 ORTHO05D008993 4.8e-22 108.6 160 41.2
PSO063G1752 Papaver somniferum HOM05D007090 ORTHO05D008993 1.1e-21 107.5 159 41.5
arahy.Tifrunner.gnm1.ann1.UP4D5N Arachis hypogaea HOM05D007090 ORTHO05D008993 1.4e-21 107.1 127 48.0
Sopen01g036660 Solanum pennellii HOM05D007090 ORTHO05D008993 1.4e-21 107.1 175 49.1
Lalb_Chr12g0207911 Lupinus albus HOM05D007090 ORTHO05D008993 2.4e-21 106.3 168 39.9
PSO782G4184 Papaver somniferum HOM05D007090 ORTHO05D008993 2.4e-21 106.3 157 40.8
SalBow5G5305 Salvia bowleyana HOM05D007090 ORTHO05D008993 1.2e-20 104.0 160 40.6
FAN10G1641 Fragaria x ananassa HOM05D007090 ORTHO05D008993 1.5e-20 103.6 161 43.5
CsaV3_6G008990 Cucumis sativus L. HOM05D007090 ORTHO05D008993 2.6e-20 102.8 159 42.8
FAN06G0781 Fragaria x ananassa HOM05D007090 ORTHO05D008993 2.6e-20 102.8 161 44.1
Phvul.010G072500 Phaseolus vulgaris HOM05D007090 ORTHO05D008993 2.6e-20 102.8 162 40.7
PGR042G2604 Punica granatum HOM05D007090 ORTHO05D008993 5.8e-20 101.7 164 39.6
Haze_02682 Corylus avellana HOM05D007090 ORTHO05D008993 7.6e-20 101.3 140 44.3
Lj3g0011300 Lotus japonicus HOM05D007090 ORTHO05D008993 7.6e-20 101.3 145 42.1
PGSC0003DMG400025974 Solanum tuberosum HOM05D007090 ORTHO05D008993 7.6e-20 101.3 184 46.2
MELO3C022245.2 Cucumis melo HOM05D007090 ORTHO05D008993 1.0e-19 100.9 159 52.8
ClCG06G002820 Citrullus lanatus HOM05D007090 ORTHO05D008993 1.3e-19 100.5 122 50.8
FAN06G2008 Fragaria x ananassa HOM05D007090 ORTHO05D008993 1.3e-19 100.5 161 43.5
ATR0317G013 Amborella trichopoda HOM05D007090 ORTHO05D008993 1.7e-19 100.1 160 40.6
EL10Ac1g00840 Beta vulgaris HOM05D007090 ORTHO05D008993 2.9e-19 99.4 161 41.6
Solyc01g090920.3 Solanum lycopersicum HOM05D007090 ORTHO05D008993 1.4e-18 97.1 195 43.6
VMungo0331G0297 Vigna mungo HOM05D007090 ORTHO05D008993 4.2e-18 95.5 160 38.8
Ah.08g212650 Amaranthus hybridus HOM05D007090 ORTHO05D008993 7.1e-18 94.7 149 43.0
Ciclev10021511m.g Citrus clementina HOM05D007090 ORTHO05D008993 1.2e-17 94.0 137 42.3
FAN03G3027 Fragaria x ananassa HOM05D007090 ORTHO05D008993 3.5e-17 92.4 118 41.5
CDE04G3442 Ceratophyllum demersum HOM05D007090 ORTHO05D008993 1.3e-16 90.5 159 48.4
arahy.Tifrunner.gnm1.ann1.KQM8V4 Arachis hypogaea HOM05D007090 ORTHO05D008993 2.3e-16 89.7 81 51.9
Os04g0534300 Oryza sativa ssp. japonica HOM05D007090 ORTHO05D008993 2.3e-16 89.7 150 37.3
AL6G53360 Arabidopsis lyrata HOM05D007090 ORTHO05D008993 9.6e-15 84.3 122 44.3
Sed0010456 Sechium edule HOM05D007090 ORTHO05D008993 1.3e-14 84.0 106 48.1
unitig_748.g7116 Utricularia gibba HOM05D007090 ORTHO05D008993 1.6e-14 83.6 49 73.5
Sp6g00210 Schrenkiella parvula HOM05D007090 ORTHO05D008993 2.1e-14 83.2 122 44.3
Carub.0006s3709 Capsella rubella HOM05D007090 ORTHO05D008993 3.1e-13 79.3 125 39.2
Eucgr.E01517 Eucalyptus grandis HOM05D007090 ORTHO05D008993 3.1e-13 79.3 78 50.0
FAN01G0616 Fragaria x ananassa HOM05D007090 ORTHO05D008993 6.9e-13 78.2 219 30.6
THA.LOC104803743 Tarenaya hassleriana HOM05D007090 ORTHO05D008993 9.0e-13 77.8 144 32.6
AT1G73440 Arabidopsis thaliana HOM05D007090 ORTHO05D008993 2.0e-12 76.6 160 32.5
Aa31LG5G170 Aethionema arabicum HOM05D007090 ORTHO05D008993 5.8e-12 75.1 134 39.6
Thhalv10028898m.g Eutrema salsugineum HOM05D007090 ORTHO05D008993 7.6e-12 74.7 125 34.4
Gohir.A11G078900 Gossypium hirsutum HOM05D007090 ORTHO05D008993 1.0e-11 74.3 121 43.0
BcaB01g02215 Brassica carinata HOM05D007090 ORTHO05D008993 2.2e-11 73.2 106 37.7
Cpa.g.sc49.155 Carica papaya HOM05D007090 ORTHO05D008993 5.0e-11 72.0 38 76.3
CARHR248180 Cardamine hirsuta HOM05D007090 ORTHO05D008993 4.2e-10 68.9 124 35.5
ECA234G4391 Erigeron canadensis HOM05D007090 ORTHO05D008993 9.3e-10 67.8 155 34.2
BcaC04g24200 Brassica carinata HOM05D007090 ORTHO05D008993 4.6e-09 65.5 51 52.9
BolC9t52948H Brassica oleracea HOM05D007090 ORTHO05D008993 4.6e-09 65.5 51 52.9
A09p00730 Brassica napus HOM05D007090 ORTHO05D008993 1.3e-08 63.9 83 39.8
C09p00130 Brassica napus HOM05D007090 ORTHO05D008993 1.3e-08 63.9 83 39.8
BraA09t35687Z Brassica rapa HOM05D007090 ORTHO05D008993 1.3e-08 63.9 83 39.8
Pp3c13_5390 Physcomitrium patens HOM05D007090 ORTHO05D008993 2.8e-06 56.2 124 33.1


User provided reference genes

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