Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0004449 Camellia sinensis var. sinensis HOM05D006343 ORTHO05D005694 9.9e-133 476.9 254 100.0
Actinidia20887 Actinidia chinensis HOM05D006343 ORTHO05D005694 4.4e-48 195.7 291 45.7
Rhsim01G0164400 Rhododendron simsii HOM05D006343 ORTHO05D005694 1.1e-46 191.0 304 44.4
vmacro20913 Vaccinium macrocarpon HOM05D006343 ORTHO05D005694 1.5e-43 180.6 312 45.5
Dinv43841 Davidia involucrata HOM05D006343 ORTHO05D005694 2.0e-40 170.2 277 47.7
vmacro20912 Vaccinium macrocarpon HOM05D006343 ORTHO05D005694 1.4e-38 164.1 310 40.6
Hma1.2p1_0702F.1_g206150 Hydrangea macrophylla HOM05D006343 ORTHO05D005694 1.9e-38 163.7 297 41.1
Rhsim01G0164000 Rhododendron simsii HOM05D006343 ORTHO05D005694 5.4e-38 162.2 306 41.8
CiPaw.02G033200 Carya illinoinensis HOM05D006343 ORTHO05D005694 5.1e-36 155.6 317 41.0
Ciclev10021525m.g Citrus clementina HOM05D006343 ORTHO05D005694 5.6e-35 152.1 308 39.6
Rhsim06G0236200 Rhododendron simsii HOM05D006343 ORTHO05D005694 1.6e-34 150.6 275 42.9
Atru.chr5.528 Acer truncatum HOM05D006343 ORTHO05D005694 3.6e-34 149.4 300 41.7
Oeu055797.1 Olea europaea HOM05D006343 ORTHO05D005694 8.9e-33 144.8 301 40.2
Sabra14G0063500 Salix brachista HOM05D006343 ORTHO05D005694 1.4e-30 137.5 317 37.2
Potri.002G161700 Populus trichocarpa HOM05D006343 ORTHO05D005694 2.4e-30 136.7 317 36.6
Prupe.2G173800 Prunus persica HOM05D006343 ORTHO05D005694 9.2e-30 134.8 305 38.7
Potri.014G087500 Populus trichocarpa HOM05D006343 ORTHO05D005694 2.1e-29 133.7 317 35.6
Sabra02G0128600 Salix brachista HOM05D006343 ORTHO05D005694 3.5e-29 132.9 314 38.2
SalBow6G3791 Salvia bowleyana HOM05D006343 ORTHO05D005694 6.0e-29 132.1 293 39.2
Oeu035725.1 Olea europaea HOM05D003054 ORTHO05D003376 3.0e-28 129.8 258 37.2
Oeu035731.1 Olea europaea HOM05D006343 ORTHO05D005694 5.1e-28 129.0 300 35.0
Manes.01G254700 Manihot esculenta HOM05D006343 ORTHO05D005694 6.6e-28 128.6 318 37.7
CsaV3_6G000720 Cucumis sativus L. HOM05D006343 ORTHO05D005694 1.9e-27 127.1 306 39.5
Duzib138G0695 Durio zibethinus HOM05D006343 ORTHO05D005694 4.3e-27 125.9 285 41.8
MSTRG.18339 Avicennia marina HOM05D006343 ORTHO05D005694 9.6e-27 124.8 289 36.3
TAR629G3314 Trochodendron aralioides HOM05D006343 ORTHO05D005694 1.6e-26 124.0 303 37.6
Nitab4.5_0003369g0030 Nicotiana tabacum HOM05D006343 ORTHO05D005694 2.1e-26 123.6 311 36.7
Dinv32502 Davidia involucrata HOM05D006343 ORTHO05D005694 3.6e-26 122.9 237 42.2
Manes.05G031900 Manihot esculenta HOM05D006343 ORTHO05D005694 4.7e-26 122.5 308 36.4
GSVIVG01026998001 Vitis vinifera HOM05D006343 ORTHO05D005694 1.4e-25 120.9 304 36.2
Lsat_1_v5_gn_7_4100 Lactuca sativa HOM05D006343 ORTHO05D005694 4.0e-25 119.4 302 35.8
Gorai.007G101600 Gossypium raimondii HOM05D006343 ORTHO05D005694 6.9e-25 118.6 279 42.3
TWI23G0998 Tripterygium wilfordii HOM05D006343 ORTHO05D005694 6.9e-25 118.6 266 39.5
MSTRG.12522 Avicennia marina HOM05D006343 ORTHO05D005694 8.9e-25 118.2 300 34.7
CiPaw.01G064000 Carya illinoinensis HOM05D006343 ORTHO05D005694 1.2e-24 117.9 323 37.8
Sed0018743 Sechium edule HOM05D006343 ORTHO05D005694 5.8e-24 115.5 305 36.1
Nitab4.5_0001040g0020 Nicotiana tabacum HOM05D006343 ORTHO05D005694 1.7e-23 114.0 332 33.7
Nitab4.5_0002749g0010 Nicotiana tabacum HOM05D006343 ORTHO05D005694 1.7e-23 114.0 312 36.2
Oeu035719.1 Olea europaea HOM05D003054 ORTHO05D003376 2.2e-23 113.6 266 34.6
FAN01G0301 Fragaria x ananassa HOM05D006343 ORTHO05D005694 3.8e-23 112.8 300 34.7
Nitab4.5_0001655g0110 Nicotiana tabacum HOM05D006343 ORTHO05D005694 3.8e-23 112.8 329 33.1
FAN10G0914 Fragaria x ananassa HOM05D006343 ORTHO05D005694 4.9e-23 112.5 298 34.6
Oeu035722.1 Olea europaea HOM05D006343 ORTHO05D005694 6.4e-23 112.1 300 33.7
CANSAT56G2487 Cannabis sativa HOM05D006343 ORTHO05D005694 8.4e-23 111.7 327 35.2
Cc02_g38320 Coffea canephora HOM05D006343 ORTHO05D005694 8.4e-23 111.7 297 35.4
RcHm_v2.0_Chr1g0357021 Rosa chinensis HOM05D006343 ORTHO05D005694 1.1e-22 111.3 296 33.4
Lsat_1_v5_gn_7_4060 Lactuca sativa HOM05D006343 ORTHO05D005694 5.4e-22 109.0 316 34.5
FAN10G3829 Fragaria x ananassa HOM05D006343 ORTHO05D005694 1.2e-21 107.8 298 33.9
Cfa003895 Carpinus fangiana HOM05D006343 ORTHO05D005694 2.1e-21 107.1 275 40.7
COL.COLO4_12739 Corchorus olitorius HOM05D006343 ORTHO05D005694 4.6e-21 105.9 289 36.3
TWI14G1134 Tripterygium wilfordii HOM05D006343 ORTHO05D005694 1.0e-20 104.8 264 38.3
MD01G1067400 Malus domestica HOM05D006343 ORTHO05D005694 1.7e-20 104.0 328 32.0
Gohir.D11G095300 Gossypium hirsutum HOM05D006343 ORTHO05D005694 2.3e-20 103.6 294 37.8
THA.LOC104825850 Tarenaya hassleriana HOM05D012121 ORTHO05D005694 3.0e-20 103.2 311 32.8
Nn1g01591 Nelumbo nucifera HOM05D006343 ORTHO05D005694 3.9e-20 102.8 310 33.2
SGA_v2.0_scaffold1G00635 Striga asiatica HOM05D006343 ORTHO05D005694 3.3e-19 99.8 326 28.8
VMungo0331G0061 Vigna mungo HOM05D006343 ORTHO05D005694 4.3e-19 99.4 278 35.6
FvH4_7g14870 Fragaria vesca HOM05D006343 ORTHO05D005694 5.6e-19 99.0 304 30.3
FAN03G1905 Fragaria x ananassa HOM05D006343 ORTHO05D005694 5.6e-19 99.0 288 31.9
CAN.G650.25 Capsicum annuum HOM05D006343 ORTHO05D005694 7.3e-19 98.6 324 32.4
unitig_22.g5289 Utricularia gibba HOM05D006343 ORTHO05D005694 7.3e-19 98.6 272 34.6
FAN06G0921 Fragaria x ananassa HOM05D006343 ORTHO05D005694 9.6e-19 98.2 298 32.6
MD07G1133500 Malus domestica HOM05D006343 ORTHO05D005694 1.6e-18 97.4 312 32.1
FvH4_7g14980 Fragaria vesca HOM05D006343 ORTHO05D005694 2.8e-18 96.7 298 32.2
Glyma.07G068200 Glycine max HOM05D006343 ORTHO05D005694 4.8e-18 95.9 301 35.5
FAN03G1311 Fragaria x ananassa HOM05D006343 ORTHO05D005694 1.4e-17 94.4 315 29.8
FAN06G0140 Fragaria x ananassa HOM05D006343 ORTHO05D005694 1.8e-17 94.0 303 30.7
CARHR248400 Cardamine hirsuta HOM05D012121 ORTHO05D005694 4.0e-17 92.8 312 31.1
Sp6g00380 Schrenkiella parvula HOM05D012121 ORTHO05D005694 4.0e-17 92.8 314 31.5
DCAR_015699 Daucus carota HOM05D006343 ORTHO05D005694 6.9e-17 92.0 269 33.5
Thhalv10028840m.g Eutrema salsugineum HOM05D012121 ORTHO05D005694 6.9e-17 92.0 309 30.4
FAN06G4353 Fragaria x ananassa HOM05D006343 ORTHO05D005694 9.0e-17 91.7 306 30.7
Oeu035728.1 Olea europaea HOM05D006343 ORTHO05D005694 9.0e-17 91.7 277 32.1
Cpa.g.sc11.35 Carica papaya HOM05D006343 ORTHO05D005694 1.2e-16 91.3 294 36.1
FAN10G3557 Fragaria x ananassa HOM05D006343 ORTHO05D005694 1.2e-16 91.3 301 31.6
Lalb_Chr17g0339411 Lupinus albus HOM05D006343 ORTHO05D005694 1.2e-16 91.3 304 34.9
DCAR_015701 Daucus carota HOM05D006343 ORTHO05D005694 1.5e-16 90.9 278 33.8
Haze_15537 Corylus avellana HOM05D006343 ORTHO05D005694 5.8e-16 89.0 274 38.0
Phvul.010G101000 Phaseolus vulgaris HOM05D006343 ORTHO05D005694 7.6e-16 88.6 280 34.3
MELO3C021196.2 Cucumis melo HOM05D006343 ORTHO05D005694 1.7e-15 87.4 304 34.9
Sopen02g019780 Solanum pennellii HOM05D006343 ORTHO05D005694 1.7e-15 87.4 321 32.4
Lj3g0021957 Lotus japonicus HOM05D006343 ORTHO05D005694 2.2e-15 87.0 316 30.4
Duzib133G0920 Durio zibethinus HOM05D006343 ORTHO05D005694 2.9e-15 86.7 294 34.7
Medtr8g028845 Medicago truncatula HOM05D006343 ORTHO05D005694 3.8e-15 86.3 266 35.0
BcaB01g02239 Brassica carinata HOM05D012121 ORTHO05D005694 8.4e-15 85.1 308 29.5
CAN.G2424.1 Capsicum annuum HOM05D006343 ORTHO05D005694 1.1e-14 84.7 353 28.9
CAN.G650.32 Capsicum annuum HOM05D006343 ORTHO05D005694 1.4e-14 84.3 329 29.5
QL04p054168 Quercus lobata HOM05D006343 ORTHO05D005694 1.9e-14 84.0 238 32.4
Solyc02g070700.3 Solanum lycopersicum HOM05D006343 ORTHO05D005694 1.9e-14 84.0 319 32.3
Solyc03g095830.3 Solanum lycopersicum HOM05D064734 ORTHO05D005694 2.4e-14 83.6 228 32.0
Glyma.16G034200 Glycine max HOM05D006343 ORTHO05D005694 3.2e-14 83.2 320 34.1
CAN.G650.35 Capsicum annuum HOM05D006343 ORTHO05D005694 5.4e-14 82.4 324 28.7
Actinidia10044 Actinidia chinensis HOM05D006343 ORTHO05D005694 1.2e-13 81.3 119 47.9
Thecc.01G356100 Theobroma cacao HOM05D006343 ORTHO05D005694 6.0e-13 79.0 293 33.1
Carub.0006s3693 Capsella rubella HOM05D012121 ORTHO05D005694 7.9e-13 78.6 307 31.3
SGA_v2.0_scaffold138G35202 Striga asiatica HOM05D004007 ORTHO05D005127 1.0e-12 78.2 255 30.6
FAN10G3545 Fragaria x ananassa HOM05D006343 ORTHO05D005694 1.3e-12 77.8 339 28.3
Sc01g0003550 Simmondsia chinensis HOM05D006343 ORTHO05D005694 3.0e-12 76.6 274 31.8
AL6G53170 Arabidopsis lyrata HOM05D012121 ORTHO05D005694 3.9e-12 76.3 316 29.7
AT4G00310 Arabidopsis thaliana HOM05D012121 ORTHO05D005694 5.1e-12 75.9 315 27.6
Eucgr.I00992 Eucalyptus grandis HOM05D006343 ORTHO05D005694 6.7e-12 75.5 320 30.9
ClCG06G003540 Citrullus lanatus HOM05D006343 ORTHO05D005694 1.1e-11 74.7 306 32.4
BcaC04g24184 Brassica carinata HOM05D012121 ORTHO05D005694 1.9e-11 73.9 308 30.5
BolC9t52962H Brassica oleracea HOM05D012121 ORTHO05D005694 1.9e-11 73.9 308 30.5
C09p00270 Brassica napus HOM05D012121 ORTHO05D005694 5.6e-11 72.4 310 30.0
Gohir.D08G153300 Gossypium hirsutum HOM05D006343 ORTHO05D005694 7.4e-11 72.0 283 34.3
ECA233G1044 Erigeron canadensis HOM05D006343 ORTHO05D005694 9.6e-11 71.6 267 32.2
EL10Ac1g00388 Beta vulgaris HOM05D029301 ORTHO05D005694 1.3e-10 71.2 289 30.4
Gohir.A11G090700 Gossypium hirsutum HOM05D006343 ORTHO05D005694 1.6e-10 70.9 297 33.3
FAN01G2602 Fragaria x ananassa HOM05D006343 ORTHO05D005694 8.1e-10 68.6 120 40.8
Medtr3g015950 Medicago truncatula HOM05D006343 ORTHO05D005694 1.1e-09 68.2 272 32.7
CAN.G650.28 Capsicum annuum HOM05D006343 ORTHO05D005694 2.4e-09 67.0 241 28.2
THA.LOC104801575 Tarenaya hassleriana HOM05D012121 ORTHO05D005694 2.4e-09 67.0 103 41.7
Aqoxy7G00256 Aquilegia oxysepala HOM05D006343 ORTHO05D005694 5.8e-08 62.4 332 27.1
Sc01g0003560 Simmondsia chinensis HOM05D006343 ORTHO05D005694 1.3e-07 61.2 122 38.5
PGR042G0313 Punica granatum HOM05D006343 ORTHO05D005694 2.2e-07 60.5 162 34.6
FAN03G2349 Fragaria x ananassa HOM05D006343 ORTHO05D005694 3.8e-07 59.7 79 48.1
BraA09t35701Z Brassica rapa HOM05D012121 ORTHO05D005694 4.9e-07 59.3 308 27.3
CDE02G1832 Ceratophyllum demersum HOM05D006343 ORTHO05D005694 8.4e-07 58.5 286 25.2
PSO782G1271 Papaver somniferum HOM05D020029 ORTHO05D005694 1.4e-06 57.8 121 35.5
CAN.G526.2 Capsicum annuum HOM05D006343 ORTHO05D005694 2.4e-06 57.0 134 36.6
Migut.D00457 Erythranthe guttata HOM05D006343 ORTHO05D005694 3.2e-06 56.6 175 34.9
A09p00590 Brassica napus HOM05D012121 ORTHO05D005694 5.5e-06 55.8 308 26.9


User provided reference genes

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