Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0004443 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 6.1e-85 317.4 154 100.0
CSS0047120 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.8e-84 315.8 154 99.4
CSS0001174 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 4.1e-81 304.7 154 95.5
CSS0001345 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 4.1e-81 304.7 154 95.5
CSS0013307 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 4.1e-81 304.7 154 95.5
CSS0017826 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 4.1e-81 304.7 154 95.5
CSS0026447 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 4.1e-81 304.7 154 95.5
CSS0026772 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 4.1e-81 304.7 154 95.5
CSS0049921 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 4.1e-81 304.7 154 95.5
CSS0003769 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.1e-78 296.6 154 92.2
CSS0029753 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 3.6e-45 185.3 137 62.8
CSS0004685 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.1e-44 183.7 137 62.8
CSS0008205 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.1e-44 183.7 137 62.8
CSS0022173 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.1e-44 183.7 137 62.8
CSS0031004 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.1e-44 183.7 137 62.8
CSS0034332 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.1e-44 183.7 137 62.8
CSS0045394 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.1e-44 183.7 137 62.8
CSS0047376 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 4.0e-44 181.8 137 62.0
CSS0038208 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 5.2e-44 181.4 137 61.3
CSS0003759 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 8.9e-44 180.6 137 61.3
CSS0021747 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.5e-43 179.9 137 62.0
CSS0033268 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.5e-43 179.9 137 62.0
Rhsim11G0007300 Rhododendron simsii HOM05D007798 ORTHO05D009882 4.4e-43 178.3 136 58.8
Rhsim05G0212100 Rhododendron simsii HOM05D007798 ORTHO05D009882 5.8e-43 177.9 136 58.8
Rhsim02G0017800 Rhododendron simsii HOM05D007798 ORTHO05D009882 7.5e-43 177.6 136 58.1
Rhsim01G0156700 Rhododendron simsii HOM05D007798 ORTHO05D009882 7.1e-41 171.0 138 55.8
Rhsim11G0057000 Rhododendron simsii HOM05D007798 ORTHO05D009882 1.6e-40 169.9 138 55.8
Rhsim06G0076200 Rhododendron simsii HOM05D000107 ORTHO05D009882 1.7e-39 166.4 138 54.3
Rhsim03G0060900 Rhododendron simsii HOM05D007798 ORTHO05D009882 1.5e-38 163.3 137 54.0
Rhsim05G0032900 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.5e-38 162.5 137 53.3
Rhsim06G0104000 Rhododendron simsii HOM05D007798 ORTHO05D009882 1.2e-37 160.2 137 53.3
Rhsim01G0150700 Rhododendron simsii HOM05D007798 ORTHO05D009882 1.6e-37 159.8 132 54.5
Rhsim06G0120600 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.1e-37 159.5 137 52.6
RhsimUnG0041700 Rhododendron simsii HOM05D007798 ORTHO05D009882 2.8e-37 159.1 137 51.8
RhsimUnG0063700 Rhododendron simsii HOM05D000107 ORTHO05D000062 8.1e-37 157.5 137 51.8
Rhsim02G0156600 Rhododendron simsii HOM05D007798 ORTHO05D009882 8.9e-36 154.1 137 51.1
Rhsim01G0063300 Rhododendron simsii HOM05D007798 ORTHO05D009882 4.4e-35 151.8 134 55.2
Rhsim11G0017600 Rhododendron simsii HOM05D007798 ORTHO05D009882 1.1e-30 137.1 110 57.3
Actinidia33688 Actinidia chinensis HOM05D007798 ORTHO05D009882 9.6e-30 134.0 110 54.5
QL05p075545 Quercus lobata HOM05D007798 ORTHO05D009882 2.8e-29 132.5 137 44.5
QL02p083298 Quercus lobata HOM05D007798 ORTHO05D009882 6.2e-29 131.3 137 44.5
QL05p078054 Quercus lobata HOM05D007798 ORTHO05D009882 8.1e-29 131.0 137 44.5
QL04p082690 Quercus lobata HOM05D007798 ORTHO05D009882 4.0e-28 128.6 137 43.8
Rhsim11G0005600 Rhododendron simsii HOM05D007798 ORTHO05D009882 5.2e-28 128.3 137 47.4
QL05p006610 Quercus lobata HOM05D007798 ORTHO05D009882 8.9e-28 127.5 137 43.8
Rhsim11G0015900 Rhododendron simsii HOM05D007798 ORTHO05D009882 2.9e-26 122.5 108 49.1
Actinidia04231 Actinidia chinensis HOM05D007798 ORTHO05D009882 7.8e-24 114.4 136 42.6
Rhsim12G0212200 Rhododendron simsii HOM05D007798 ORTHO05D009882 2.5e-22 109.4 107 51.4
Hma1.2p1_0849F.1_g228030 Hydrangea macrophylla HOM05D007798 ORTHO05D009882 2.1e-21 106.3 133 39.1
Rhsim09G0073700 Rhododendron simsii HOM05D007798 ORTHO05D009882 1.8e-20 103.2 86 57.0
RhsimUnG0235000 Rhododendron simsii HOM05D007798 ORTHO05D009882 1.1e-17 94.0 89 51.7
CSS0004734 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.9e-17 93.2 71 69.0
vmacro12525 Vaccinium macrocarpon HOM05D007798 ORTHO05D009882 1.9e-17 93.2 88 47.7
CSS0021921 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 2.4e-17 92.8 63 73.0
Rhsim02G0157700 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.2e-17 92.4 77 50.6
Actinidia03841 Actinidia chinensis HOM05D007798 ORTHO05D009882 2.1e-16 89.7 87 48.3
Hma1.2p1_0613F.1_g189140 Hydrangea macrophylla HOM05D007798 ORTHO05D009882 4.6e-16 88.6 92 44.6
Actinidia07485 Actinidia chinensis HOM05D007798 ORTHO05D009882 6.6e-15 84.7 79 44.3
Rhsim05G0057700 Rhododendron simsii HOM05D007798 ORTHO05D009882 5.6e-14 81.6 78 51.3
Rhsim11G0003100 Rhododendron simsii HOM05D007798 ORTHO05D009882 6.2e-13 78.2 60 55.0
CSS0035454 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D015543 1.8e-12 76.6 73 52.1
Rhsim09G0076000 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.8e-12 76.6 62 54.8
Rhsim03G0114400 Rhododendron simsii HOM05D007798 ORTHO05D009882 9.0e-12 74.3 60 56.7
CSS0032723 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 7.6e-11 71.2 39 84.6
Actinidia38754 Actinidia chinensis HOM05D007798 ORTHO05D009882 2.9e-10 69.3 99 33.3
vmacro17806 Vaccinium macrocarpon HOM05D008549 ORTHO05D010234 2.9e-10 69.3 131 31.3
vmacro23182 Vaccinium macrocarpon HOM05D008549 ORTHO05D010234 2.9e-10 69.3 131 31.3
vmacro07116 Vaccinium macrocarpon HOM05D001028 ORTHO05D000827 5.5e-09 65.1 56 53.6
Rhsim10G0213800 Rhododendron simsii HOM05D008549 ORTHO05D010234 1.2e-08 63.9 129 28.7
Rhsim09G0060200 Rhododendron simsii HOM05D008549 ORTHO05D010234 2.1e-08 63.2 124 29.8
QL93p0053_0646 Quercus lobata HOM05D007798 ORTHO05D009882 1.0e-07 60.8 84 34.5
MBI13_g12520_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 3.9e-07 58.9 131 29.0
MBI12_g43234_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 5.1e-07 58.5 131 28.2
MBI02_g29975_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 6.7e-07 58.2 126 27.8
MBI07_g22513_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 8.7e-07 57.8 133 26.3
CSS0011214 Camellia sinensis var. sinensis HOM05D017353 ORTHO05D009882 1.1e-06 57.4 77 40.3
Rhsim09G0047300 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.1e-06 57.4 125 28.8
CSS0044986 Camellia sinensis var. sinensis HOM05D017353 ORTHO05D009882 1.5e-06 57.0 58 50.0
MBI19_g18856_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.9e-06 56.6 131 26.7
Rhsim04G0116500 Rhododendron simsii HOM05D008549 ORTHO05D010234 1.9e-06 56.6 109 27.5
Hma1.2p1_0101F.1_g049380 Hydrangea macrophylla HOM05D005507 ORTHO05D009882 4.3e-06 55.5 45 46.7
MBI05_g43492_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 4.3e-06 55.5 140 25.7
MBI09_g39165_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 4.3e-06 55.5 109 31.2
MBI18_g17722_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 9.6e-06 54.3 113 26.5


User provided reference genes

Program Settings