Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0004398 Camellia sinensis var. sinensis HOM05D005492 ORTHO05D006911 5.1e-56 220.7 101 100.0
CSS0048416 Camellia sinensis var. sinensis HOM05D005492 ORTHO05D006911 1.9e-47 192.2 91 96.7
Sed0023469 Sechium edule HOM05D005492 ORTHO05D006911 4.8e-46 187.6 95 89.5
Atru.BG.248.p Acer truncatum HOM05D005492 ORTHO05D006911 8.1e-46 186.8 91 93.4
Atru.chr13.934 Acer truncatum HOM05D005492 ORTHO05D006911 8.1e-46 186.8 91 93.4
Ciclev10002666m.g Citrus clementina HOM05D005492 ORTHO05D006911 8.1e-46 186.8 95 89.5
COL.COLO4_35339 Corchorus olitorius HOM05D005492 ORTHO05D006911 1.1e-45 186.4 95 88.4
Nitab4.5_0000377g0170 Nicotiana tabacum HOM05D005492 ORTHO05D006911 1.1e-45 186.4 95 89.5
Nitab4.5_0005557g0040 Nicotiana tabacum HOM05D005492 ORTHO05D006911 1.1e-45 186.4 95 89.5
MELO3C003490.2 Cucumis melo HOM05D005492 ORTHO05D006911 1.4e-45 186.0 91 91.2
CsaV3_3G048290 Cucumis sativus L. HOM05D005492 ORTHO05D006911 1.4e-45 186.0 91 91.2
Peaxi162Scf00626g00718 Petunia axillaris HOM05D005492 ORTHO05D006911 1.4e-45 186.0 91 93.4
Gohir.A05G264075 Gossypium hirsutum HOM05D005492 ORTHO05D006911 1.8e-45 185.7 95 88.4
Gohir.D05G266500 Gossypium hirsutum HOM05D005492 ORTHO05D006911 1.8e-45 185.7 95 88.4
Gorai.009G278400 Gossypium raimondii HOM05D005492 ORTHO05D006911 1.8e-45 185.7 95 88.4
Hma1.2p1_1548F.1_g290020 Hydrangea macrophylla HOM05D005492 ORTHO05D006911 1.8e-45 185.7 91 92.3
MD08G1209200 Malus domestica HOM05D005492 ORTHO05D006911 2.4e-45 185.3 95 87.4
HanXRQChr01g0001771 Helianthus annuus HOM05D005492 ORTHO05D006911 3.1e-45 184.9 95 88.4
RcHm_v2.0_Chr7g0232851 Rosa chinensis HOM05D005492 ORTHO05D006911 3.1e-45 184.9 95 88.4
CAN.G723.31 Capsicum annuum HOM05D005492 ORTHO05D006911 4.0e-45 184.5 91 91.2
Gohir.D06G028400 Gossypium hirsutum HOM05D005492 ORTHO05D006911 4.0e-45 184.5 95 87.4
Thecc.08G078100 Theobroma cacao HOM05D005492 ORTHO05D006911 4.0e-45 184.5 95 87.4
TWI12G1341 Tripterygium wilfordii HOM05D005492 ORTHO05D006911 4.0e-45 184.5 91 91.2
TAR628G0115 Trochodendron aralioides HOM05D005492 ORTHO05D006911 4.0e-45 184.5 91 91.2
Cfa020694 Carpinus fangiana HOM05D005492 ORTHO05D006911 5.3e-45 184.1 91 91.2
CiPaw.15G151700 Carya illinoinensis HOM05D005492 ORTHO05D006911 5.3e-45 184.1 91 90.1
Haze_18999 Corylus avellana HOM05D005492 ORTHO05D006911 5.3e-45 184.1 91 91.2
DCAR_009548 Daucus carota HOM05D005492 ORTHO05D006911 5.3e-45 184.1 95 89.5
Glyma.06G091400 Glycine max HOM05D005492 ORTHO05D006911 5.3e-45 184.1 91 90.1
MBI16_g26726_MAGBIO Magnolia biondii HOM05D005492 ORTHO05D006911 5.3e-45 184.1 95 88.4
Manes.18G054601 Manihot esculenta HOM05D005492 ORTHO05D006911 5.3e-45 184.1 91 91.2
Solyc04g076890.4 Solanum lycopersicum HOM05D005492 ORTHO05D006911 5.3e-45 184.1 95 88.4
Sopen04g030660 Solanum pennellii HOM05D005492 ORTHO05D006911 5.3e-45 184.1 95 88.4
PGSC0003DMG400006380 Solanum tuberosum HOM05D005492 ORTHO05D006911 5.3e-45 184.1 95 88.4
AL1G40960 Arabidopsis lyrata HOM05D005492 ORTHO05D006911 6.9e-45 183.7 95 86.3
AT1G27530 Arabidopsis thaliana HOM05D005492 ORTHO05D006911 6.9e-45 183.7 95 86.3
Carub.0001s2610 Capsella rubella HOM05D005492 ORTHO05D006911 6.9e-45 183.7 95 86.3
Dinv44895 Davidia involucrata HOM05D005492 ORTHO05D006911 6.9e-45 183.7 91 91.2
Lsat_1_v5_gn_9_81101 Lactuca sativa HOM05D005492 ORTHO05D006911 6.9e-45 183.7 95 87.4
vmacro21373 Vaccinium macrocarpon HOM05D005492 ORTHO05D006911 6.9e-45 183.7 95 87.4
Dinv22020 Davidia involucrata HOM05D005492 ORTHO05D006911 9.0e-45 183.3 91 91.2
FAN04G2818 Fragaria x ananassa HOM05D005492 ORTHO05D006911 9.0e-45 183.3 95 87.4
Phvul.009G146200 Phaseolus vulgaris HOM05D005492 ORTHO05D006911 9.0e-45 183.3 91 91.2
Prupe.1G541400 Prunus persica HOM05D005492 ORTHO05D006911 9.0e-45 183.3 95 87.4
Actinidia19266 Actinidia chinensis HOM05D005492 ORTHO05D006911 1.2e-44 183.0 91 91.2
Gohir.A06G029400 Gossypium hirsutum HOM05D005492 ORTHO05D006911 1.2e-44 183.0 95 86.3
MD15G1393200 Malus domestica HOM05D005492 ORTHO05D006911 1.2e-44 183.0 95 86.3
THA.LOC104800327 Tarenaya hassleriana HOM05D005492 ORTHO05D006911 1.2e-44 183.0 95 87.4
arahy.Tifrunner.gnm1.ann1.7IN1UY Arachis hypogaea HOM05D005492 ORTHO05D006911 1.5e-44 182.6 91 90.1
arahy.Tifrunner.gnm1.ann1.EMS59G Arachis hypogaea HOM05D005492 ORTHO05D006911 1.5e-44 182.6 91 90.1
MSTRG.22188 Avicennia marina HOM05D005492 ORTHO05D006911 1.5e-44 182.6 95 87.4
MSTRG.24417 Avicennia marina HOM05D005492 ORTHO05D006911 1.5e-44 182.6 95 87.4
CDE04G0412 Ceratophyllum demersum HOM05D005492 ORTHO05D006911 1.5e-44 182.6 91 89.0
QL12p040192 Quercus lobata HOM05D005492 ORTHO05D006911 1.5e-44 182.6 91 90.1
CANSAT35G2015 Cannabis sativa HOM05D005492 ORTHO05D006911 2.0e-44 182.2 91 90.1
Oeu002945.1 Olea europaea HOM05D005492 ORTHO05D006911 2.0e-44 182.2 95 86.3
Sabra02G0084500 Salix brachista HOM05D005492 ORTHO05D006911 2.0e-44 182.2 91 90.1
unitig_8.g4867 Utricularia gibba HOM05D002193 ORTHO05D002631 2.0e-44 182.2 95 86.3
VMungo1309G2191 Vigna mungo HOM05D005492 ORTHO05D006911 2.0e-44 182.2 91 90.1
CARHR027130 Cardamine hirsuta HOM05D005492 ORTHO05D006911 2.6e-44 181.8 95 85.3
Eucgr.F00462 Eucalyptus grandis HOM05D005492 ORTHO05D006911 2.6e-44 181.8 95 86.3
Gorai.010G031300 Gossypium raimondii HOM05D005492 ORTHO05D006911 2.6e-44 181.8 95 86.3
Lj4A81T75 Lonicera japonica HOM05D005492 ORTHO05D006911 2.6e-44 181.8 95 88.4
Lj1g0026792 Lotus japonicus HOM05D005492 ORTHO05D006911 2.6e-44 181.8 91 90.1
Cpa.g.sc160.3 Carica papaya HOM05D005492 ORTHO05D006911 3.4e-44 181.4 91 90.1
Duzib041G0144 Durio zibethinus HOM05D005492 ORTHO05D006911 3.4e-44 181.4 95 86.3
FvH4_5g33720 Fragaria vesca HOM05D005492 ORTHO05D006911 3.4e-44 181.4 95 86.3
FAN08G0693 Fragaria x ananassa HOM05D005492 ORTHO05D006911 3.4e-44 181.4 95 86.3
FAN18G0360 Fragaria x ananassa HOM05D005492 ORTHO05D006911 3.4e-44 181.4 95 86.3
Glyma.04G089600 Glycine max HOM05D005492 ORTHO05D006911 3.4e-44 181.4 91 89.0
Oeu026363.1 Olea europaea HOM05D005492 ORTHO05D006911 3.4e-44 181.4 95 86.3
PSO210G2227 Papaver somniferum HOM05D005492 ORTHO05D006911 3.4e-44 181.4 91 89.0
PSO761G0095 Papaver somniferum HOM05D005492 ORTHO05D006911 3.4e-44 181.4 91 89.0
PGR083G0175 Punica granatum HOM05D005492 ORTHO05D006911 3.4e-44 181.4 95 85.3
vmacro04619 Vaccinium macrocarpon HOM05D005492 ORTHO05D006911 3.4e-44 181.4 91 89.0
Potri.002G107600 Populus trichocarpa HOM05D005492 ORTHO05D006911 4.5e-44 181.0 91 89.0
TWI32G1091 Tripterygium wilfordii HOM05D005492 ORTHO05D006911 4.5e-44 181.0 91 89.0
Ca_15548_v3 Cicer arietinum L. HOM05D005492 ORTHO05D006911 5.8e-44 180.6 91 87.9
Hund05232 Selenicereus undatus HOM05D005492 ORTHO05D006911 5.8e-44 180.6 95 86.3
TAR381G0934 Trochodendron aralioides HOM05D005492 ORTHO05D006911 7.6e-44 180.3 91 89.0
TAR381G1662 Trochodendron aralioides HOM05D005492 ORTHO05D006911 7.6e-44 180.3 91 89.0
ECA232G4293 Erigeron canadensis HOM05D005492 ORTHO05D006911 1.0e-43 179.9 95 85.3
Medtr3g111110 Medicago truncatula HOM05D005492 ORTHO05D006911 1.0e-43 179.9 91 89.0
Duzib041G0066 Durio zibethinus HOM05D005492 ORTHO05D006911 1.3e-43 179.5 95 85.3
Aqoxy5G01947 Aquilegia oxysepala HOM05D005492 ORTHO05D006911 1.7e-43 179.1 91 89.0
Sp1g23790 Schrenkiella parvula HOM05D005492 ORTHO05D006911 1.7e-43 179.1 95 84.2
C07p17680 Brassica napus HOM05D005492 ORTHO05D006911 2.2e-43 178.7 95 85.3
Cc10_g08150 Coffea canephora HOM05D005492 ORTHO05D006911 2.2e-43 178.7 95 86.3
Migut.N02829 Erythranthe guttata HOM05D005492 ORTHO05D006911 2.2e-43 178.7 95 85.3
Migut.O00437 Erythranthe guttata HOM05D005492 ORTHO05D006911 2.2e-43 178.7 95 85.3
Psat5g017920 Pisum sativum HOM05D005492 ORTHO05D006911 2.2e-43 178.7 91 87.9
Actinidia10257 Actinidia chinensis HOM05D005492 ORTHO05D006911 2.9e-43 178.3 91 87.9
Duzib116G0911 Durio zibethinus HOM05D005492 ORTHO05D006911 2.9e-43 178.3 95 83.2
Thhalv10008910m.g Eutrema salsugineum HOM05D005492 ORTHO05D006911 2.9e-43 178.3 95 84.2
Lalb_Chr08g0242711 Lupinus albus HOM05D005492 ORTHO05D006911 2.9e-43 178.3 91 86.8
GSVIVG01009242001 Vitis vinifera HOM05D005492 ORTHO05D006911 2.9e-43 178.3 91 89.0
C03p74220 Brassica napus HOM05D005492 ORTHO05D006911 3.8e-43 177.9 95 84.2
BolC3t19680H Brassica oleracea HOM05D005492 ORTHO05D006911 3.8e-43 177.9 95 84.2
A07p11710 Brassica napus HOM05D005492 ORTHO05D006911 4.9e-43 177.6 95 84.2
A08p26210 Brassica napus HOM05D005492 ORTHO05D006911 4.9e-43 177.6 95 84.2
BolC7t42275H Brassica oleracea HOM05D005492 ORTHO05D006911 4.9e-43 177.6 95 84.2
BraA07t28956Z Brassica rapa HOM05D005492 ORTHO05D006911 4.9e-43 177.6 95 84.2
BraA08t34572Z Brassica rapa HOM05D005492 ORTHO05D006911 4.9e-43 177.6 95 84.2
BcaB03g13980 Brassica carinata HOM05D005492 ORTHO05D006911 6.5e-43 177.2 95 83.2
BcaC01g06944 Brassica carinata HOM05D005492 ORTHO05D006911 6.5e-43 177.2 95 83.2
Rhsim07G0214900 Rhododendron simsii HOM05D005492 ORTHO05D006911 8.4e-43 176.8 91 90.1
BcaC01g01601 Brassica carinata HOM05D005492 ORTHO05D006911 1.4e-42 176.0 95 83.2
AUR62035408 Chenopodium quinoa HOM05D005492 ORTHO05D006911 1.4e-42 176.0 95 83.2
AUR62035696 Chenopodium quinoa HOM05D005492 ORTHO05D006911 1.4e-42 176.0 95 83.2
SGA_v2.0_scaffold28G11869 Striga asiatica HOM05D005492 ORTHO05D006911 1.4e-42 176.0 95 83.2
TPR.G12370 Trifolium pratense HOM05D005492 ORTHO05D006911 1.9e-42 175.6 91 86.8
Ah.00g000130 Amaranthus hybridus HOM05D005492 ORTHO05D006911 2.5e-42 175.3 95 83.2
BcaC05g26754 Brassica carinata HOM05D005492 ORTHO05D006911 2.5e-42 175.3 95 83.2
BcaC06g35300 Brassica carinata HOM05D005492 ORTHO05D006911 4.2e-42 174.5 95 83.2
MBI16_g14677_MAGBIO Magnolia biondii HOM05D005492 ORTHO05D006911 5.5e-42 174.1 97 85.6
Sc02g0008380 Simmondsia chinensis HOM05D005492 ORTHO05D006911 3.5e-41 171.4 95 81.1
THA.LOC104807850 Tarenaya hassleriana HOM05D005492 ORTHO05D006911 7.9e-41 170.2 95 82.1
Aa31LG7G10120 Aethionema arabicum HOM05D005492 ORTHO05D006911 1.3e-40 169.5 95 81.1
Cfa015905 Carpinus fangiana HOM05D005492 ORTHO05D000088 4.3e-39 164.5 93 79.6
HPP92_010753 Vanilla planifolia HOM05D005492 ORTHO05D006911 1.6e-38 162.5 95 77.9
SEGI_29138 Sequoiadendron giganteum HOM05D005492 ORTHO05D006911 4.8e-38 161.0 91 76.9
AagrBONN_evm.TU.Sc2ySwM_369.477 Anthoceros agrestis HOM05D005492 ORTHO05D006911 6.3e-38 160.6 95 72.6
Os10g0205200 Oryza sativa ssp. japonica HOM05D005492 ORTHO05D006911 1.4e-37 159.5 91 78.0
Zm00001eb010950 Zea mays HOM05D005492 ORTHO05D006911 4.1e-37 157.9 91 75.8
ATR0767G107 Amborella trichopoda HOM05D005492 ORTHO05D006911 1.4e-34 149.4 93 72.0
Mapoly0013s0107 Marchantia polymorpha HOM05D005492 ORTHO05D006911 7.2e-34 147.1 95 68.4
CBR_g37394 Chara braunii HOM05D005492 ORTHO05D006911 2.7e-33 145.2 95 68.4
Prupe.7G085600 Prunus persica HOM05D005492 ORTHO05D006911 6.1e-33 144.1 74 86.5
Pp3c16_2350 Physcomitrium patens HOM05D005492 ORTHO05D006911 1.5e-31 139.4 91 67.0
PRCOL_00001807 Prasinoderma coloniale HOM05D005492 ORTHO05D006911 9.7e-31 136.7 91 60.4
ClCG11G014860 Citrullus lanatus HOM05D005492 ORTHO05D006911 1.3e-30 136.3 66 89.4
Cre02.g142350 Chlamydomonas reinhardtii HOM05D005492 ORTHO05D006911 2.0e-23 112.5 89 55.1
Haze_27628 Corylus avellana HOM05D005492 ORTHO05D006911 6.9e-21 104.0 86 54.7
Nn2g14030 Nelumbo nucifera HOM05D005492 ORTHO05D006911 1.2e-17 93.2 72 63.9
Dinv07042 Davidia involucrata HOM05D005492 ORTHO05D185078 1.1e-15 86.7 92 55.4
MD00G1203800 Malus domestica HOM05D005492 ORTHO05D247194 1.7e-11 72.8 56 58.9
MD16G1251000 Malus domestica HOM05D005492 ORTHO05D245813 1.7e-11 72.8 56 58.9
Duzib093G0511 Durio zibethinus HOM05D005492 ORTHO05D006911 2.1e-09 65.9 39 71.8
MD08G1145300 Malus domestica HOM05D005492 ORTHO05D006911 2.2e-06 55.8 32 65.6


User provided reference genes

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