Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0004361 Camellia sinensis var. sinensis HOM05D007827 ORTHO05D009749 1.7e-89 333.2 239 100.0
Actinidia01227 Actinidia chinensis HOM05D007827 ORTHO05D009749 6.0e-47 191.8 230 54.3
Rhsim11G0042400 Rhododendron simsii HOM05D007827 ORTHO05D009749 1.0e-46 191.0 239 51.5
CSS0031213 Camellia sinensis var. sinensis HOM05D007827 ORTHO05D009749 5.1e-46 188.7 243 49.0
CSS0026056 Camellia sinensis var. sinensis HOM05D007827 ORTHO05D009749 1.5e-37 160.6 236 44.1
Dinv28003 Davidia involucrata HOM05D007827 ORTHO05D009749 2.5e-37 159.8 237 53.6
Hma1.2p1_0801F.1_g220250 Hydrangea macrophylla HOM05D007827 ORTHO05D009749 1.1e-35 154.5 239 46.0
Cc08_g10870 Coffea canephora HOM05D007827 ORTHO05D009749 1.3e-33 147.5 254 43.3
CSS0037057 Camellia sinensis var. sinensis HOM05D007827 ORTHO05D009749 1.1e-29 134.4 225 40.4
Nitab4.5_0007037g0010 Nicotiana tabacum HOM05D007827 ORTHO05D009749 2.8e-28 129.8 253 37.5
Nitab4.5_0002039g0090 Nicotiana tabacum HOM05D007827 ORTHO05D009749 1.8e-27 127.1 253 37.2
Peaxi162Scf00297g00062 Petunia axillaris HOM05D007827 ORTHO05D009749 4.5e-26 122.5 254 37.0
Hma1.2p1_1933F.1_g308040 Hydrangea macrophylla HOM05D007827 ORTHO05D009749 6.4e-25 118.6 240 39.2
Nitab4.5_0000972g0020 Nicotiana tabacum HOM05D007827 ORTHO05D009749 3.0e-22 109.8 241 33.6
Sopen08g018370 Solanum pennellii HOM05D007827 ORTHO05D009749 1.9e-21 107.1 143 48.3
PGSC0003DMG400008199 Solanum tuberosum HOM05D007827 ORTHO05D009749 1.9e-21 107.1 143 48.3
Solyc06g011440.1 Solanum lycopersicum HOM05D007827 ORTHO05D009749 2.5e-21 106.7 238 35.3
TAR626G1076 Trochodendron aralioides HOM05D007827 ORTHO05D009749 5.6e-21 105.5 231 47.6
Solyc08g062840.1 Solanum lycopersicum HOM05D007827 ORTHO05D009749 9.6e-21 104.8 252 38.1
Sopen06g006480 Solanum pennellii HOM05D007827 ORTHO05D009749 9.6e-21 104.8 238 34.9
Nitab4.5_0007177g0010 Nicotiana tabacum HOM05D007827 ORTHO05D009749 2.8e-20 103.2 251 32.7
Haze_18158 Corylus avellana HOM05D007827 ORTHO05D009749 3.7e-20 102.8 231 39.4
CiPaw.16G027300 Carya illinoinensis HOM05D007827 ORTHO05D009749 6.2e-20 102.1 247 32.4
DCAR_003136 Daucus carota HOM05D007827 ORTHO05D009749 1.1e-19 101.3 119 50.4
Peaxi162Scf01001g00001 Petunia axillaris HOM05D007827 ORTHO05D009749 1.1e-19 101.3 126 43.7
Lsat_1_v5_gn_6_13921 Lactuca sativa HOM05D007827 ORTHO05D009749 2.4e-19 100.1 111 57.7
Sabra06G0174900 Salix brachista HOM05D007827 ORTHO05D009749 2.4e-19 100.1 137 46.0
QL02p000760 Quercus lobata HOM05D007827 ORTHO05D009749 4.0e-19 99.4 235 34.5
CAN.G130.10 Capsicum annuum HOM05D007827 ORTHO05D009749 9.0e-19 98.2 240 33.3
Aqoxy7G01166 Aquilegia oxysepala HOM05D007827 ORTHO05D009749 3.4e-18 96.3 240 31.7
Oeu018628.1 Olea europaea HOM05D007827 ORTHO05D009749 3.4e-18 96.3 235 37.0
MD15G1056900 Malus domestica HOM05D007827 ORTHO05D009749 4.5e-18 95.9 237 32.5
Potri.006G226200 Populus trichocarpa HOM05D007827 ORTHO05D009749 7.6e-18 95.1 136 44.9
Prupe.1G409500 Prunus persica HOM05D007827 ORTHO05D009749 1.0e-17 94.7 243 43.2
SalBow4G1896 Salvia bowleyana HOM05D007827 ORTHO05D009749 4.9e-17 92.4 133 48.1
Manes.16G082000 Manihot esculenta HOM05D007827 ORTHO05D009749 1.9e-16 90.5 133 37.6
PGSC0003DMG400029878 Solanum tuberosum HOM05D007827 ORTHO05D009749 1.9e-16 90.5 119 46.2
Oeu047101.1 Olea europaea HOM05D007827 ORTHO05D009749 1.2e-15 87.8 93 54.8
MELO3C011460.2 Cucumis melo HOM05D007827 ORTHO05D009749 1.6e-15 87.4 239 31.4
RcHm_v2.0_Chr6g0311201 Rosa chinensis HOM05D007827 ORTHO05D009749 4.6e-15 85.9 146 39.7
Cpa.g.sc7.157 Carica papaya HOM05D007827 ORTHO05D009749 7.9e-15 85.1 248 35.5
Migut.A00115 Erythranthe guttata HOM05D007827 ORTHO05D009749 1.3e-14 84.3 62 67.7
Thecc.09G056900 Theobroma cacao HOM05D007827 ORTHO05D009749 3.0e-14 83.2 240 46.7
SGA_v2.0_scaffold20G09207 Striga asiatica HOM05D007827 ORTHO05D009749 1.5e-13 80.9 114 45.6
ClCG08G010040 Citrullus lanatus HOM05D007827 ORTHO05D009749 1.9e-13 80.5 235 35.7
CsaV3_6G032200 Cucumis sativus L. HOM05D007827 ORTHO05D009749 1.9e-13 80.5 237 30.0
Glyma.04G052400 Glycine max HOM05D007827 ORTHO05D009749 3.3e-13 79.7 124 37.9
Lalb_Chr23g0267841 Lupinus albus HOM05D007827 ORTHO05D009749 7.4e-13 78.6 126 40.5
Atru.chr7.1942 Acer truncatum HOM05D007827 ORTHO05D009749 9.7e-13 78.2 67 61.2
Lj1g0018619 Lotus japonicus HOM05D007827 ORTHO05D009749 1.3e-12 77.8 255 29.0
MBI04_g36906_MAGBIO Magnolia biondii HOM05D007827 ORTHO05D009749 6.3e-12 75.5 242 30.2
FvH4_2g31620 Fragaria vesca HOM05D007827 ORTHO05D009749 4.1e-11 72.8 156 35.9
FAN24G3029 Fragaria x ananassa HOM05D007827 ORTHO05D009749 5.3e-11 72.4 157 35.7
Gorai.009G043700 Gossypium raimondii HOM05D007827 ORTHO05D009749 5.3e-11 72.4 120 36.7
HPP92_007654 Vanilla planifolia HOM05D007827 ORTHO05D009749 5.3e-11 72.4 64 54.7
HPP92_009146 Vanilla planifolia HOM05D007827 ORTHO05D009749 5.3e-11 72.4 102 42.2
ECA240G3049 Erigeron canadensis HOM05D007827 ORTHO05D009749 6.9e-11 72.0 107 43.9
Phvul.009G078700 Phaseolus vulgaris HOM05D007827 ORTHO05D009749 9.0e-11 71.6 236 35.6
Gohir.D05G042650 Gossypium hirsutum HOM05D007827 ORTHO05D009749 3.4e-10 69.7 120 35.0
ATR0789G035 Amborella trichopoda HOM05D007827 ORTHO05D009749 7.7e-10 68.6 52 59.6
unitig_37.g12945 Utricularia gibba HOM05D007827 ORTHO05D009749 7.7e-10 68.6 83 47.0
Sed0014394 Sechium edule HOM05D007827 ORTHO05D009749 1.3e-09 67.8 121 34.7
Ciclev10010468m.g Citrus clementina HOM05D007827 ORTHO05D009749 6.5e-09 65.5 104 39.4
FAN15G3566 Fragaria x ananassa HOM05D007827 ORTHO05D009749 6.5e-09 65.5 157 32.5
COL.COLO4_08756 Corchorus olitorius HOM05D030950 ORTHO05D009749 1.1e-08 64.7 252 33.7
FAN27G2967 Fragaria x ananassa HOM05D007827 ORTHO05D009749 1.1e-08 64.7 136 36.0
Medtr3g104620 Medicago truncatula HOM05D007827 ORTHO05D009749 1.1e-08 64.7 235 24.7
VMungo1309G0458 Vigna mungo HOM05D007827 ORTHO05D009749 1.4e-08 64.3 128 36.7
Psat6g021400 Pisum sativum HOM05D007827 ORTHO05D009749 2.5e-08 63.5 132 33.3
TPR.G3528 Trifolium pratense HOM05D007827 ORTHO05D009749 2.5e-08 63.5 63 50.8
Medtr1g015840 Medicago truncatula HOM05D007827 ORTHO05D009749 4.2e-08 62.8 121 37.2
SGA_v2.0_scaffold169G38700 Striga asiatica HOM05D007827 ORTHO05D009749 4.2e-08 62.8 40 65.0
Gohir.A05G040950 Gossypium hirsutum HOM05D007827 ORTHO05D009749 5.5e-08 62.4 92 40.2
Psat5g036160 Pisum sativum HOM05D007827 ORTHO05D009749 7.2e-08 62.0 126 32.5
Sed0025262 Sechium edule HOM05D007827 ORTHO05D009749 1.2e-07 61.2 212 27.4
Lj5g0025960 Lotus japonicus HOM05D007827 ORTHO05D009749 1.6e-07 60.8 122 33.6
arahy.Tifrunner.gnm1.ann1.S72ULK Arachis hypogaea HOM05D007827 ORTHO05D009749 1.0e-06 58.2 48 52.1
THA.LOC104799160 Tarenaya hassleriana HOM05D007827 ORTHO05D009749 1.0e-06 58.2 128 35.2
arahy.Tifrunner.gnm1.ann1.WVJ8VS Arachis hypogaea HOM05D007827 ORTHO05D009749 1.8e-06 57.4 48 52.1
TPR.G13014 Trifolium pratense HOM05D007827 ORTHO05D009749 5.1e-06 55.8 140 30.7
Sp2g21610 Schrenkiella parvula HOM05D002043 ORTHO05D009749 8.8e-06 55.1 130 36.9


User provided reference genes

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