Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0004350 Camellia sinensis var. sinensis HOM05D008213 ORTHO05D009787 6.0e-214 747.3 389 100.0
Dinv44200 Davidia involucrata HOM05D008213 ORTHO05D009787 8.2e-78 295.0 515 45.0
Hma1.2p1_0754F.1_g213080 Hydrangea macrophylla HOM05D008213 ORTHO05D009787 2.6e-55 220.3 420 40.0
TAR362G1061 Trochodendron aralioides HOM05D008213 ORTHO05D009787 3.6e-41 173.3 415 34.5
GSVIVG01010744001 Vitis vinifera HOM05D008213 ORTHO05D009787 2.3e-40 170.6 407 36.9
QL10p048331 Quercus lobata HOM05D008213 ORTHO05D009787 5.0e-35 152.9 479 31.9
Thecc.04G185000 Theobroma cacao HOM05D008213 ORTHO05D009787 2.6e-31 140.6 517 30.4
HanXRQChr02g0058051 Helianthus annuus HOM05D008213 ORTHO05D009787 3.4e-31 140.2 363 35.5
Potri.007G127200 Populus trichocarpa HOM05D008213 ORTHO05D009787 4.6e-28 129.8 446 30.9
Prupe.1G190600 Prunus persica HOM05D008213 ORTHO05D009787 4.6e-28 129.8 439 31.9
ECA233G5141 Erigeron canadensis HOM05D008213 ORTHO05D009787 2.3e-27 127.5 260 38.1
Manes.11G119400 Manihot esculenta HOM05D008213 ORTHO05D009787 3.9e-27 126.7 403 30.5
Duzib151G0756 Durio zibethinus HOM05D008213 ORTHO05D009787 7.3e-26 122.5 561 27.6
DCAR_017617 Daucus carota HOM05D008213 ORTHO05D009787 8.0e-25 119.0 428 30.1
CiPaw.01G101800 Carya illinoinensis HOM05D008213 ORTHO05D009787 8.9e-24 115.5 417 32.1
Sc13g0006830 Simmondsia chinensis HOM05D022167 ORTHO05D009787 9.8e-23 112.1 315 32.7
Lsat_1_v5_gn_6_57280 Lactuca sativa HOM05D008213 ORTHO05D009787 1.1e-21 108.6 409 29.6
Gohir.A02G015000 Gossypium hirsutum HOM05D007318 ORTHO05D009289 1.4e-21 108.2 378 29.4
Gohir.D02G016500 Gossypium hirsutum HOM05D008213 ORTHO05D009787 3.2e-21 107.1 378 29.1
Gorai.005G020000 Gossypium raimondii HOM05D008213 ORTHO05D009787 3.2e-21 107.1 221 36.7
RcHm_v2.0_Chr4g0407081 Rosa chinensis HOM05D008213 ORTHO05D009787 1.6e-20 104.8 428 28.0
Carub.0001s0526 Capsella rubella HOM05D008213 ORTHO05D009787 1.9e-18 97.8 399 27.8
AUR62015410 Chenopodium quinoa HOM05D022167 ORTHO05D009787 1.9e-18 97.8 283 34.6
AUR62002285 Chenopodium quinoa HOM05D022167 ORTHO05D009787 3.6e-17 93.6 283 33.9
AT1G05894 Arabidopsis thaliana HOM05D008213 ORTHO05D009787 1.4e-16 91.7 413 26.2
Sp1g04730 Schrenkiella parvula HOM05D008213 ORTHO05D009787 2.3e-16 90.9 397 26.2
Cpa.g.sc71.7 Carica papaya HOM05D008213 ORTHO05D009787 2.0e-15 87.8 387 27.9
Sabra07G0103200 Salix brachista HOM05D008213 ORTHO05D009787 4.4e-15 86.7 484 25.2
Thhalv10009329m.g Eutrema salsugineum HOM05D008213 ORTHO05D009787 1.4e-13 81.6 410 25.9
AL1G15840 Arabidopsis lyrata HOM05D008213 ORTHO05D009787 3.2e-13 80.5 400 25.0
PGR142G1601 Punica granatum HOM05D008213 ORTHO05D009787 4.1e-13 80.1 396 25.3
Aqoxy5G00188 Aquilegia oxysepala HOM05D008213 ORTHO05D009787 1.6e-12 78.2 401 26.7
Glyma.12G053300 Glycine max HOM05D010840 ORTHO05D009787 2.1e-12 77.8 221 33.5
TPR.G12768 Trifolium pratense HOM05D010840 ORTHO05D009787 2.1e-12 77.8 171 33.9
Ah.07g201850 Amaranthus hybridus HOM05D022167 ORTHO05D009787 3.5e-12 77.0 282 30.5
VMungo1127G1898 Vigna mungo HOM05D010840 ORTHO05D009787 4.6e-12 76.6 206 33.0
ECA248G0875 Erigeron canadensis HOM05D000554 ORTHO05D000860 6.0e-12 76.3 177 33.9
VMungo1080G1829 Vigna mungo HOM05D002632 ORTHO05D002881 1.3e-11 75.1 167 37.1
Medtr2g098610 Medicago truncatula HOM05D010840 ORTHO05D009787 3.0e-11 73.9 187 34.2
PSO675G1160 Papaver somniferum HOM05D008213 ORTHO05D009787 3.9e-11 73.6 247 31.6
arahy.Tifrunner.gnm1.ann1.0UQ2B1 Arachis hypogaea HOM05D010840 ORTHO05D009787 6.6e-11 72.8 175 37.1
Aa31LG1G8440 Aethionema arabicum HOM05D008213 ORTHO05D009787 1.5e-10 71.6 394 24.4
arahy.Tifrunner.gnm1.ann1.JQ8CCA Arachis hypogaea HOM05D010840 ORTHO05D009787 1.9e-10 71.2 175 36.0
Ciclev10023340m.g Citrus clementina HOM05D008213 ORTHO05D009787 1.9e-10 71.2 277 25.3
TPR.G18857 Trifolium pratense HOM05D010840 ORTHO05D009787 2.5e-10 70.9 170 32.9
C08p02290 Brassica napus HOM05D008213 ORTHO05D009787 5.6e-10 69.7 349 27.2
Glyma.15G030900 Glycine max HOM05D010840 ORTHO05D009787 7.3e-10 69.3 131 33.6
BcaC07g36821 Brassica carinata HOM05D008213 ORTHO05D009787 2.1e-09 67.8 353 26.9
Glyma.11G128800 Glycine max HOM05D010840 ORTHO05D009787 2.1e-09 67.8 225 29.8
BolC8t47021H Brassica oleracea HOM05D008213 ORTHO05D009787 2.8e-09 67.4 349 26.9
CARHR005430 Cardamine hirsuta HOM05D008213 ORTHO05D009787 2.8e-09 67.4 401 25.2
Phvul.011G055300 Phaseolus vulgaris HOM05D010840 ORTHO05D009787 2.8e-09 67.4 215 29.8
CARHR125120 Cardamine hirsuta HOM05D008213 ORTHO05D009787 3.6e-09 67.0 400 25.8
Medtr2g098620 Medicago truncatula HOM05D010840 ORTHO05D009787 3.6e-09 67.0 175 35.4
Thhalv10017539m.g Eutrema salsugineum HOM05D008213 ORTHO05D009787 4.7e-09 66.6 407 24.8
Carub.0004s1279 Capsella rubella HOM05D008213 ORTHO05D009787 1.1e-08 65.5 396 23.0
A08p36230 Brassica napus HOM05D008213 ORTHO05D009787 1.4e-08 65.1 352 27.3
ClCG07G015580 Citrullus lanatus HOM05D008213 ORTHO05D009787 1.4e-08 65.1 212 29.7
Ca_01266_v3 Cicer arietinum L. HOM05D010840 ORTHO05D009787 1.8e-08 64.7 197 31.5
Lalb_Chr24g0396871 Lupinus albus HOM05D010840 ORTHO05D009787 3.1e-08 63.9 163 31.3
AT2G31480 Arabidopsis thaliana HOM05D008213 ORTHO05D009787 6.8e-08 62.8 409 24.0
Lj3g0021471 Lotus japonicus HOM05D010840 ORTHO05D009787 1.5e-07 61.6 130 36.9
THA.LOC104826192 Tarenaya hassleriana HOM05D008213 ORTHO05D009787 2.0e-07 61.2 418 21.3
CsaV3_4G003270 Cucumis sativus L. HOM05D008213 ORTHO05D009787 2.6e-07 60.8 276 28.3
MBI08_g22655_MAGBIO Magnolia biondii HOM05D008213 ORTHO05D009787 4.4e-07 60.1 373 24.9
MELO3C017723.2 Cucumis melo HOM05D008213 ORTHO05D009787 9.9e-07 58.9 172 31.4
AL4G26740 Arabidopsis lyrata HOM05D008213 ORTHO05D009787 1.3e-06 58.5 412 23.3
BraA08t35527Z Brassica rapa HOM05D008213 ORTHO05D009787 3.7e-06 57.0 348 25.9
Atru.chr3.1539 Acer truncatum HOM05D008213 ORTHO05D009787 4.9e-06 56.6 91 37.4
BcaC02g11256 Brassica carinata HOM05D008213 ORTHO05D009787 4.9e-06 56.6 192 25.5
C04p18480 Brassica napus HOM05D008213 ORTHO05D009787 4.9e-06 56.6 192 25.5
BolC4t23398H Brassica oleracea HOM05D008213 ORTHO05D009787 4.9e-06 56.6 192 25.5
Phvul.005G152200 Phaseolus vulgaris HOM05D010840 ORTHO05D009787 4.9e-06 56.6 129 36.4


User provided reference genes

Program Settings