Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0004349 Camellia sinensis var. sinensis HOM05D001903 ORTHO05D013215 3.9e-28 127.5 68 100.0
QL02p103892 Quercus lobata HOM05D000166 ORTHO05D013215 8.8e-12 73.2 56 60.7
QL02p104342 Quercus lobata HOM05D000166 ORTHO05D013215 8.8e-12 73.2 56 60.7
arahy.Tifrunner.gnm1.ann1.1E0HE3 Arachis hypogaea HOM05D001903 ORTHO05D013215 5.7e-11 70.5 53 62.3
arahy.Tifrunner.gnm1.ann1.50KXA0 Arachis hypogaea HOM05D001903 ORTHO05D013215 5.7e-11 70.5 55 58.2
MD04G1183000 Malus domestica HOM05D000166 ORTHO05D000812 7.5e-11 70.1 56 53.6
arahy.Tifrunner.gnm1.ann1.ZC4B2S Arachis hypogaea HOM05D001903 ORTHO05D001847 1.7e-10 68.9 52 61.5
SEGI_26042 Sequoiadendron giganteum HOM05D000166 ORTHO05D000812 1.7e-10 68.9 55 60.0
Ah.10g036700 Amaranthus hybridus HOM05D000166 ORTHO05D000812 2.8e-10 68.2 56 57.1
arahy.Tifrunner.gnm1.ann1.K0E5I2 Arachis hypogaea HOM05D000500 ORTHO05D000367 2.8e-10 68.2 56 57.1
SEGI_19318 Sequoiadendron giganteum HOM05D000166 ORTHO05D000812 1.8e-09 65.5 56 51.8
Rhsim11G0113700 Rhododendron simsii HOM05D000166 ORTHO05D000812 3.1e-09 64.7 53 69.8
PGSC0003DMG400018265 Solanum tuberosum HOM05D000166 ORTHO05D013215 2.0e-08 62.0 56 51.8
vmacro01632 Vaccinium macrocarpon HOM05D000166 ORTHO05D000812 2.7e-08 61.6 65 58.5
SEGI_19935 Sequoiadendron giganteum HOM05D000166 ORTHO05D013215 4.5e-08 60.8 56 48.2
SEGI_01804 Sequoiadendron giganteum HOM05D000166 ORTHO05D000812 1.0e-07 59.7 56 48.2
Zm00001eb089730 Zea mays HOM05D000166 ORTHO05D013215 1.7e-07 58.9 55 47.3
Zm00001eb412300 Zea mays HOM05D000166 ORTHO05D013215 1.7e-07 58.9 55 47.3
VMungo0251G2911 Vigna mungo HOM05D002683 ORTHO05D007757 1.5e-06 55.8 53 50.9
Hund15333 Selenicereus undatus HOM05D000166 ORTHO05D000812 1.9e-06 55.5 55 50.9
Lsat_1_v5_gn_1_96600 Lactuca sativa HOM05D000166 ORTHO05D000812 3.3e-06 54.7 55 41.8


User provided reference genes

Program Settings