Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0004305 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 4.2e-170 601.3 306 100.0
CSS0005216 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 1.4e-80 303.9 187 86.6
CSS0029580 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 1.4e-77 293.9 188 82.4
CSS0037861 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 1.4e-77 293.9 188 82.4
CSS0039359 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 1.4e-77 293.9 188 82.4
CSS0023015 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 2.9e-62 243.0 186 66.7
CSS0027932 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 1.3e-59 234.2 186 66.7
Rhsim09G0060200 Rhododendron simsii HOM05D008549 ORTHO05D010234 1.2e-26 124.8 188 40.4
Rhsim10G0213800 Rhododendron simsii HOM05D008549 ORTHO05D010234 9.8e-26 121.7 125 46.4
vmacro17806 Vaccinium macrocarpon HOM05D008549 ORTHO05D010234 1.2e-23 114.8 155 40.6
vmacro23182 Vaccinium macrocarpon HOM05D008549 ORTHO05D010234 2.7e-23 113.6 161 38.5
Rhsim12G0092900 Rhododendron simsii HOM05D009300 ORTHO05D010234 5.9e-23 112.5 153 41.8
vmacro04245 Vaccinium macrocarpon HOM05D017338 ORTHO05D010234 2.2e-22 110.5 256 32.4
Rhsim04G0237300 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.8e-22 109.8 182 38.5
Rhsim02G0138000 Rhododendron simsii HOM05D009300 ORTHO05D010234 2.5e-21 107.1 127 44.9
Rhsim04G0116500 Rhododendron simsii HOM05D008549 ORTHO05D010234 1.2e-20 104.8 211 31.8
RhsimUnG0074200 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.6e-20 104.4 227 34.4
Rhsim01G0128900 Rhododendron simsii HOM05D009300 ORTHO05D010234 8.0e-20 102.1 252 28.2
Rhsim07G0158800 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.4e-19 101.3 197 33.0
CSS0008322 Camellia sinensis var. sinensis HOM05D014646 ORTHO05D010234 1.3e-17 94.7 47 97.9
CSS0045362 Camellia sinensis var. sinensis HOM05D014646 ORTHO05D010234 1.3e-17 94.7 69 69.6
CSS0049548 Camellia sinensis var. sinensis HOM05D014646 ORTHO05D010234 1.3e-17 94.7 47 97.9
CSS0014258 Camellia sinensis var. sinensis HOM05D014646 ORTHO05D010234 6.3e-17 92.4 47 95.7
CSS0020249 Camellia sinensis var. sinensis HOM05D014646 ORTHO05D010234 6.3e-17 92.4 47 95.7
CSS0020818 Camellia sinensis var. sinensis HOM05D014646 ORTHO05D010234 6.3e-17 92.4 47 95.7
vmacro00531 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 8.3e-17 92.0 171 34.5
Rhsim06G0220100 Rhododendron simsii HOM05D008549 ORTHO05D010234 1.1e-16 91.7 121 42.1
CSS0015286 Camellia sinensis var. sinensis HOM05D014646 ORTHO05D010234 2.4e-16 90.5 47 93.6
CSS0015949 Camellia sinensis var. sinensis HOM05D014646 ORTHO05D010234 3.1e-16 90.1 47 93.6
vmacro13454 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 4.5e-15 86.3 274 27.7
CSS0038432 Camellia sinensis var. sinensis HOM05D014646 ORTHO05D010234 6.6e-14 82.4 69 62.3
Rhsim06G0048900 Rhododendron simsii HOM05D009300 ORTHO05D010234 3.3e-13 80.1 228 32.9
QL05p006610 Quercus lobata HOM05D007798 ORTHO05D009882 2.8e-12 77.0 257 28.8
Rhsim06G0049000 Rhododendron simsii HOM05D009300 ORTHO05D010234 3.6e-12 76.6 247 30.4
CSS0048357 Camellia sinensis var. sinensis HOM05D027835 ORTHO05D113274 5.2e-11 72.8 55 72.7
QL02p083298 Quercus lobata HOM05D007798 ORTHO05D009882 5.2e-11 72.8 222 31.1
Rhsim01G0183600 Rhododendron simsii HOM05D000107 ORTHO05D000062 5.2e-11 72.8 185 35.1
CSS0003527 Camellia sinensis var. sinensis HOM05D014646 ORTHO05D109064 6.8e-11 72.4 47 74.5
CSS0022370 Camellia sinensis var. sinensis HOM05D027835 ORTHO05D109422 6.8e-11 72.4 55 74.5
CSS0013594 Camellia sinensis var. sinensis HOM05D027835 ORTHO05D110451 8.9e-11 72.0 54 74.1
TWI38G2136 Tripterygium wilfordii HOM05D003120 ORTHO05D000669 8.9e-11 72.0 153 26.8
CSS0017527 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 1.2e-10 71.6 253 25.3
QL05p075545 Quercus lobata HOM05D007798 ORTHO05D009882 2.0e-10 70.9 181 30.4
CSS0040020 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 3.4e-10 70.1 182 26.9
QL05p078054 Quercus lobata HOM05D007798 ORTHO05D009882 3.4e-10 70.1 118 35.6
CSS0041515 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 4.4e-10 69.7 190 27.4
Rhsim04G0111400 Rhododendron simsii HOM05D009565 ORTHO05D012252 1.7e-09 67.8 223 26.9
Rhsim03G0060900 Rhododendron simsii HOM05D007798 ORTHO05D009882 2.9e-09 67.0 279 25.1
Rhsim04G0140300 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.9e-09 67.0 211 29.9
Rhsim05G0032900 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.9e-09 67.0 197 26.4
Rhsim11G0003100 Rhododendron simsii HOM05D007798 ORTHO05D009882 2.9e-09 67.0 249 27.3
RhsimUnG0041700 Rhododendron simsii HOM05D007798 ORTHO05D009882 2.9e-09 67.0 197 26.4
Rhsim03G0038000 Rhododendron simsii HOM05D009565 ORTHO05D012252 3.7e-09 66.6 223 26.9
RhsimUnG0068400 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.8e-08 64.3 187 31.0
CSS0005824 Camellia sinensis var. sinensis HOM05D027835 ORTHO05D111226 4.1e-08 63.2 57 63.2
Rhsim02G0157700 Rhododendron simsii HOM05D000107 ORTHO05D000062 4.1e-08 63.2 155 29.7
Rhsim12G0114600 Rhododendron simsii HOM05D009565 ORTHO05D012252 7.0e-08 62.4 184 28.3
QL04p082690 Quercus lobata HOM05D007798 ORTHO05D009882 9.2e-08 62.0 99 36.4
vmacro14328 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 1.2e-07 61.6 92 31.5
MBI18_g17722_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.6e-07 61.2 231 28.6
Rhsim01G0156700 Rhododendron simsii HOM05D007798 ORTHO05D009882 2.7e-07 60.5 194 27.8
Rhsim05G0127300 Rhododendron simsii HOM05D024557 ORTHO05D010234 3.5e-07 60.1 129 30.2
CSS0003322 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 4.6e-07 59.7 36 75.0
CSS0012803 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 4.6e-07 59.7 36 75.0
CSS0024740 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 4.6e-07 59.7 36 75.0
CSS0032482 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 4.6e-07 59.7 36 75.0
CSS0047068 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 4.6e-07 59.7 36 75.0
CSS0048301 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 4.6e-07 59.7 36 75.0
Rhsim11G0057000 Rhododendron simsii HOM05D007798 ORTHO05D009882 4.6e-07 59.7 189 27.5
RhsimUnG0063700 Rhododendron simsii HOM05D000107 ORTHO05D000062 4.6e-07 59.7 189 25.9
CSS0002056 Camellia sinensis var. sinensis HOM05D021745 ORTHO05D010234 5.9e-07 59.3 48 60.4
CSS0001367 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 7.8e-07 58.9 178 25.3
Rhsim01G0150700 Rhododendron simsii HOM05D007798 ORTHO05D009882 1.0e-06 58.5 120 30.0
CSS0019606 Camellia sinensis var. sinensis HOM05D021745 ORTHO05D010234 1.3e-06 58.2 48 58.3
CSS0014387 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.7e-06 57.8 32 93.8
Rhsim08G0110800 Rhododendron simsii HOM05D009565 ORTHO05D012252 1.7e-06 57.8 137 27.0
CSS0009398 Camellia sinensis var. sinensis HOM05D021745 ORTHO05D010234 2.3e-06 57.4 48 58.3
CSS0033294 Camellia sinensis var. sinensis HOM05D021745 ORTHO05D010234 2.3e-06 57.4 48 58.3
Oeu006554.1 Olea europaea HOM05D017951 ORTHO05D020916 2.3e-06 57.4 212 24.5
Actinidia38754 Actinidia chinensis HOM05D007798 ORTHO05D009882 2.9e-06 57.0 225 26.2
Rhsim06G0076200 Rhododendron simsii HOM05D000107 ORTHO05D009882 2.9e-06 57.0 117 30.8
CSS0048637 Camellia sinensis var. sinensis HOM05D021745 ORTHO05D010234 8.6e-06 55.5 48 58.3


User provided reference genes

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