Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0004222 Camellia sinensis var. sinensis HOM05D014951 ORTHO05D013045 8.0e-94 347.1 172 100.0
CSS0048052 Camellia sinensis var. sinensis HOM05D020540 ORTHO05D013045 4.1e-29 132.1 164 49.4
CSS0034673 Camellia sinensis var. sinensis HOM05D014951 ORTHO05D013045 2.6e-20 102.8 122 45.1
CSS0042261 Camellia sinensis var. sinensis HOM05D014951 ORTHO05D013045 1.0e-19 100.9 148 41.2
CSS0009477 Camellia sinensis var. sinensis HOM05D014951 ORTHO05D013045 3.0e-16 89.4 122 40.2
CSS0027706 Camellia sinensis var. sinensis HOM05D014951 ORTHO05D013045 1.1e-15 87.4 98 46.9
CSS0008775 Camellia sinensis var. sinensis HOM05D014951 ORTHO05D013045 7.4e-15 84.7 109 43.1
CSS0034567 Camellia sinensis var. sinensis HOM05D028315 ORTHO05D007704 1.5e-12 77.0 106 43.4
Dinv08590 Davidia involucrata HOM05D010100 ORTHO05D006370 2.0e-12 76.6 112 37.5
Dinv04932 Davidia involucrata HOM05D010100 ORTHO05D006370 1.7e-11 73.6 95 44.2
Dinv36988 Davidia involucrata HOM05D010100 ORTHO05D006370 6.5e-11 71.6 110 37.3
CSS0018973 Camellia sinensis var. sinensis HOM05D028315 ORTHO05D013045 7.2e-10 68.2 88 46.6
CSS0022885 Camellia sinensis var. sinensis HOM05D028315 ORTHO05D013045 7.2e-10 68.2 88 46.6
PGSC0003DMG400046683 Solanum tuberosum HOM05D008032 ORTHO05D006370 8.0e-09 64.7 82 32.9
PGSC0003DMG400047165 Solanum tuberosum HOM05D008032 ORTHO05D006370 8.0e-09 64.7 84 40.5
CSS0010442 Camellia sinensis var. sinensis HOM05D020540 ORTHO05D013045 1.4e-08 63.9 78 46.2
CSS0007903 Camellia sinensis var. sinensis HOM05D028315 ORTHO05D013045 1.8e-08 63.5 126 35.7
PGSC0003DMG402010693 Solanum tuberosum HOM05D008032 ORTHO05D006370 1.8e-08 63.5 80 42.5
Solyc04g049380.4 Solanum lycopersicum HOM05D000290 ORTHO05D007415 8.8e-08 61.2 122 30.3
PGSC0003DMG400019828 Solanum tuberosum HOM05D008032 ORTHO05D006370 1.5e-07 60.5 83 36.1
Dinv13641 Davidia involucrata HOM05D010100 ORTHO05D006370 2.6e-07 59.7 112 34.8
PGSC0003DMG400023777 Solanum tuberosum HOM05D008032 ORTHO05D006370 2.6e-07 59.7 77 36.4
Peaxi162Scf00386g00616 Petunia axillaris HOM05D001137 ORTHO05D005066 5.7e-07 58.5 79 36.7
CAN.G530.3 Capsicum annuum HOM05D008032 ORTHO05D006370 7.4e-07 58.2 74 33.8
PGSC0003DMG400021934 Solanum tuberosum HOM05D008877 ORTHO05D006370 7.4e-07 58.2 90 33.3
PGSC0003DMG400044383 Solanum tuberosum HOM05D008032 ORTHO05D006370 9.7e-07 57.8 112 29.5
CSS0035103 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.7e-06 57.0 110 33.6
CSS0044903 Camellia sinensis var. sinensis HOM05D020540 ORTHO05D109243 2.8e-06 56.2 89 41.6
Dinv10840 Davidia involucrata HOM05D012569 ORTHO05D006370 2.8e-06 56.2 78 32.1
CSS0025386 Camellia sinensis var. sinensis HOM05D002560 ORTHO05D003782 6.3e-06 55.1 85 35.3
CSS0023159 Camellia sinensis var. sinensis HOM05D020540 ORTHO05D013045 8.2e-06 54.7 53 50.9
PGSC0003DMG400038517 Solanum tuberosum HOM05D008877 ORTHO05D006370 8.2e-06 54.7 82 39.0


User provided reference genes

Program Settings