Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0004136 Camellia sinensis var. sinensis HOM05D006216 ORTHO05D007760 4.1e-237 824.3 413 100.0
Actinidia07007 Actinidia chinensis HOM05D006216 ORTHO05D007760 6.6e-195 684.1 413 84.3
vmacro04357 Vaccinium macrocarpon HOM05D006216 ORTHO05D007760 2.5e-194 682.2 413 84.5
CSS0031944 Camellia sinensis var. sinensis HOM05D006216 ORTHO05D007760 2.0e-191 672.5 416 82.9
Dinv29341 Davidia involucrata HOM05D006216 ORTHO05D007760 8.4e-190 667.2 409 81.4
Rhsim13G0202500 Rhododendron simsii HOM05D006216 ORTHO05D007760 2.6e-183 645.6 405 81.7
MSTRG.12426 Avicennia marina HOM05D006216 ORTHO05D007760 1.1e-181 640.2 402 76.9
Lj2A825T28 Lonicera japonica HOM05D006216 ORTHO05D007760 1.5e-175 619.8 405 77.0
Hma1.2p1_1843F.1_g305010 Hydrangea macrophylla HOM05D006216 ORTHO05D007760 2.6e-175 619.0 414 76.1
Nitab4.5_0002300g0020 Nicotiana tabacum HOM05D006216 ORTHO05D007760 3.4e-175 618.6 401 77.3
TAR633G2593 Trochodendron aralioides HOM05D006216 ORTHO05D007760 2.9e-174 615.5 405 75.8
Peaxi162Scf00050g02022 Petunia axillaris HOM05D006216 ORTHO05D007760 6.5e-174 614.4 416 74.8
Haze_23545 Corylus avellana HOM05D006216 ORTHO05D007760 1.9e-173 612.8 408 75.7
GSVIVG01037382001 Vitis vinifera HOM05D006216 ORTHO05D007760 1.9e-173 612.8 402 76.9
CAN.G714.2 Capsicum annuum HOM05D006216 ORTHO05D007760 1.6e-172 609.8 403 75.7
Sopen01g004500 Solanum pennellii HOM05D006216 ORTHO05D007760 1.6e-172 609.8 376 79.8
PGSC0003DMG400022703 Solanum tuberosum HOM05D006216 ORTHO05D007760 4.6e-172 608.2 376 79.8
SalBow6G4438 Salvia bowleyana HOM05D006216 ORTHO05D007760 6.1e-172 607.8 403 74.4
Cc01_g07140 Coffea canephora HOM05D006216 ORTHO05D007760 2.3e-171 605.9 410 74.1
Cfa010159 Carpinus fangiana HOM05D006216 ORTHO05D007760 3.9e-171 605.1 404 75.7
Solyc01g009010.3 Solanum lycopersicum HOM05D006216 ORTHO05D007760 3.9e-171 605.1 376 79.5
QL01p020730 Quercus lobata HOM05D006216 ORTHO05D007760 8.7e-171 604.0 406 75.1
Manes.01G176400 Manihot esculenta HOM05D006216 ORTHO05D007760 1.9e-170 602.8 412 75.0
Migut.D00703 Erythranthe guttata HOM05D006216 ORTHO05D007760 3.3e-170 602.1 394 74.4
VMungo1215G0750 Vigna mungo HOM05D006216 ORTHO05D007760 9.7e-170 600.5 405 73.6
Lj6g0023824 Lotus japonicus HOM05D006216 ORTHO05D007760 1.3e-169 600.1 410 73.7
SGA_v2.0_scaffold79G25547 Striga asiatica HOM05D006216 ORTHO05D007760 1.4e-168 596.7 434 70.7
arahy.Tifrunner.gnm1.ann1.G3L2E7 Arachis hypogaea HOM05D006216 ORTHO05D007760 5.3e-168 594.7 410 72.7
CiPaw.13G146100 Carya illinoinensis HOM05D006216 ORTHO05D007760 6.9e-168 594.3 409 73.6
Glyma.20G046800 Glycine max HOM05D006216 ORTHO05D007760 9.0e-168 594.0 410 73.2
Phvul.006G019500 Phaseolus vulgaris HOM05D006216 ORTHO05D007760 1.2e-167 593.6 413 71.9
MSTRG.21323 Avicennia marina HOM05D006216 ORTHO05D007760 1.5e-167 593.2 395 73.7
Lalb_Chr18g0048331 Lupinus albus HOM05D006216 ORTHO05D007760 7.7e-167 590.9 406 74.1
Nn7g37015 Nelumbo nucifera HOM05D006216 ORTHO05D007760 7.7e-167 590.9 383 78.1
Ca_13675_v3 Cicer arietinum L. HOM05D006216 ORTHO05D007760 1.7e-166 589.7 401 73.8
ECA238G2733 Erigeron canadensis HOM05D006216 ORTHO05D007760 6.5e-166 587.8 383 76.5
Glyma.13G072700 Glycine max HOM05D006216 ORTHO05D007760 8.5e-166 587.4 406 72.2
PGR119G0354 Punica granatum HOM05D006216 ORTHO05D007760 2.5e-165 585.9 388 75.5
PSO339G5720 Papaver somniferum HOM05D006216 ORTHO05D007760 3.2e-165 585.5 396 74.5
PSO384G3582 Papaver somniferum HOM05D006216 ORTHO05D007760 3.2e-165 585.5 396 74.5
TPR.G11861 Trifolium pratense HOM05D006216 ORTHO05D007760 5.5e-165 584.7 410 71.0
Lsat_1_v5_gn_2_36221 Lactuca sativa HOM05D006216 ORTHO05D007760 3.6e-164 582.0 379 74.9
Manes.02G134400 Manihot esculenta HOM05D006216 ORTHO05D007760 7.9e-164 580.9 409 73.6
RcHm_v2.0_Chr5g0050131 Rosa chinensis HOM05D006216 ORTHO05D007760 2.3e-163 579.3 369 78.3
Thecc.09G251000 Theobroma cacao HOM05D006216 ORTHO05D007760 3.0e-163 578.9 395 72.9
Lalb_Chr15g0080191 Lupinus albus HOM05D006216 ORTHO05D007760 6.7e-163 577.8 402 72.6
MD03G1163100 Malus domestica HOM05D006216 ORTHO05D007760 6.7e-163 577.8 411 73.7
Ciclev10015579m.g Citrus clementina HOM05D006216 ORTHO05D007760 5.7e-162 574.7 361 78.1
AUR62024257 Chenopodium quinoa HOM05D006216 ORTHO05D007760 7.4e-162 574.3 412 69.9
Duzib168G1114 Durio zibethinus HOM05D006216 ORTHO05D007760 1.3e-161 573.5 402 73.6
Gohir.D07G123300 Gossypium hirsutum HOM05D006216 ORTHO05D007760 2.8e-161 572.4 396 72.5
Medtr3g437340 Medicago truncatula HOM05D006216 ORTHO05D007760 3.7e-161 572.0 400 71.2
Sed0006982 Sechium edule HOM05D006216 ORTHO05D007760 6.3e-161 571.2 372 74.5
Potri.001G225100 Populus trichocarpa HOM05D006216 ORTHO05D007760 1.1e-160 570.5 412 71.1
FAN21G1147 Fragaria x ananassa HOM05D006216 ORTHO05D007760 1.4e-160 570.1 337 81.9
Gohir.A07G119000 Gossypium hirsutum HOM05D006216 ORTHO05D007760 2.4e-160 569.3 396 72.2
Sc04g0009550 Simmondsia chinensis HOM05D006216 ORTHO05D007760 2.4e-160 569.3 379 72.8
MELO3C015605.2 Cucumis melo HOM05D006216 ORTHO05D007760 3.1e-160 568.9 389 72.8
FvH4_3g27650 Fragaria vesca HOM05D006216 ORTHO05D007760 3.1e-160 568.9 337 81.6
FAN11G0826 Fragaria x ananassa HOM05D006216 ORTHO05D007760 3.1e-160 568.9 337 81.6
FAN25G0225 Fragaria x ananassa HOM05D006216 ORTHO05D007760 3.1e-160 568.9 337 81.9
Aqoxy1G00047 Aquilegia oxysepala HOM05D006216 ORTHO05D007760 1.2e-159 567.0 401 72.1
Potri.009G021800 Populus trichocarpa HOM05D006216 ORTHO05D007760 2.0e-159 566.2 401 72.8
HanXRQChr14g0433421 Helianthus annuus HOM05D006216 ORTHO05D007760 5.9e-159 564.7 410 71.0
CsaV3_1G041900 Cucumis sativus L. HOM05D006216 ORTHO05D007760 7.7e-159 564.3 376 75.0
Gorai.001G133000 Gossypium raimondii HOM05D006216 ORTHO05D007760 7.7e-159 564.3 398 72.4
arahy.Tifrunner.gnm1.ann1.CPM77E Arachis hypogaea HOM05D006216 ORTHO05D007760 1.7e-158 563.1 343 79.0
AUR62005484 Chenopodium quinoa HOM05D006216 ORTHO05D007760 2.2e-158 562.8 333 80.8
TWI31G0496 Tripterygium wilfordii HOM05D006216 ORTHO05D007760 6.5e-158 561.2 405 69.9
TWI75G0612 Tripterygium wilfordii HOM05D006216 ORTHO05D007760 8.5e-158 560.8 412 69.4
Eucgr.J00662 Eucalyptus grandis HOM05D006216 ORTHO05D007760 1.1e-157 560.5 349 77.9
AL4G20170 Arabidopsis lyrata HOM05D006216 ORTHO05D007760 1.6e-156 556.6 344 77.3
Carub.0004s0743 Capsella rubella HOM05D006216 ORTHO05D007760 1.6e-156 556.6 388 71.9
Thhalv10002004m.g Eutrema salsugineum HOM05D006216 ORTHO05D007760 2.1e-156 556.2 358 74.0
Psat5g182280 Pisum sativum HOM05D006216 ORTHO05D007760 2.1e-156 556.2 415 69.6
Sp4g08430 Schrenkiella parvula HOM05D006216 ORTHO05D007760 2.1e-156 556.2 381 73.0
BolC4t23960H Brassica oleracea HOM05D006216 ORTHO05D007760 3.6e-156 555.4 343 77.0
BcaC02g10847 Brassica carinata HOM05D006216 ORTHO05D007760 6.1e-156 554.7 343 76.7
A07p17910 Brassica napus HOM05D006216 ORTHO05D007760 6.1e-156 554.7 377 73.2
BraA07t29509Z Brassica rapa HOM05D006216 ORTHO05D007760 6.1e-156 554.7 377 73.2
CARHR119100 Cardamine hirsuta HOM05D006216 ORTHO05D007760 7.9e-156 554.3 339 78.2
THA.LOC104816956 Tarenaya hassleriana HOM05D006216 ORTHO05D007760 7.9e-156 554.3 402 69.7
AT2G26930 Arabidopsis thaliana HOM05D006216 ORTHO05D007760 1.4e-155 553.5 377 73.2
Sabra16G0133700 Salix brachista HOM05D006216 ORTHO05D007760 1.8e-155 553.1 461 64.4
CANSAT54G1188 Cannabis sativa HOM05D006216 ORTHO05D007760 2.3e-155 552.7 407 69.8
Hund25392 Selenicereus undatus HOM05D006216 ORTHO05D007760 2.3e-155 552.7 394 69.5
Os01g0802100 Oryza sativa ssp. japonica HOM05D006216 ORTHO05D007760 3.0e-155 552.4 342 76.6
BcaB02g10053 Brassica carinata HOM05D006216 ORTHO05D007760 6.7e-155 551.2 384 71.4
C04p24560 Brassica napus HOM05D006216 ORTHO05D007760 4.4e-154 548.5 388 70.4
Zm00001eb150630 Zea mays HOM05D006216 ORTHO05D007760 1.8e-152 543.1 337 75.7
Nitab4.5_0000428g0050 Nicotiana tabacum HOM05D006216 ORTHO05D007760 1.7e-150 536.6 439 64.7
ClCG03G014320 Citrullus lanatus HOM05D006216 ORTHO05D007760 2.9e-150 535.8 391 70.3
Atru.BG.104.p Acer truncatum HOM05D006216 ORTHO05D007760 5.0e-150 535.0 299 86.0
ATR0782G058 Amborella trichopoda HOM05D006216 ORTHO05D007760 1.1e-149 533.9 330 76.4
Migut.N02401 Erythranthe guttata HOM05D006216 ORTHO05D007760 2.7e-148 529.3 396 68.9
CDE08G0663 Ceratophyllum demersum HOM05D006216 ORTHO05D007760 3.6e-148 528.9 378 71.2
Aa31LG5G8850 Aethionema arabicum HOM05D006216 ORTHO05D007760 3.0e-147 525.8 425 63.5
CDE09G0516 Ceratophyllum demersum HOM05D006216 ORTHO05D007760 5.2e-147 525.0 408 68.1
EL10Ac6g13846 Beta vulgaris HOM05D006216 ORTHO05D007760 1.4e-144 516.9 396 66.9
DCAR_006327 Daucus carota HOM05D006216 ORTHO05D007760 3.1e-144 515.8 405 69.1
Atru.chr3.2830 Acer truncatum HOM05D006216 ORTHO05D007760 2.0e-143 513.1 356 73.3
unitig_27.g25131 Utricularia gibba HOM05D006216 ORTHO05D007760 1.0e-139 500.7 407 64.4
HPP92_001661 Vanilla planifolia HOM05D006216 ORTHO05D007760 3.4e-138 495.7 413 62.7
Hma1.2p1_1843F.1_g305000 Hydrangea macrophylla HOM05D006216 ORTHO05D007760 4.7e-132 475.3 320 75.9
Pp3c26_490 Physcomitrium patens HOM05D006216 ORTHO05D007760 6.6e-126 454.9 341 63.9
SMO367G1046 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 9.5e-125 451.1 335 63.9
Mapoly0033s0031 Marchantia polymorpha HOM05D006216 ORTHO05D007760 4.4e-122 442.2 333 64.6
CBR_g22270 Chara braunii HOM05D006216 ORTHO05D007760 9.2e-120 434.5 330 64.2
MBI19_g37419_MAGBIO Magnolia biondii HOM05D006216 ORTHO05D007760 1.5e-114 417.2 324 66.4
Prupe.4G269400 Prunus persica HOM05D006216 ORTHO05D007760 8.6e-110 401.4 289 72.7
AagrBONN_evm.TU.Sc2ySwM_228.3849 Anthoceros agrestis HOM05D006216 ORTHO05D007760 1.8e-107 393.7 290 65.9
MCO08G209 Micromonas commoda HOM05D006216 ORTHO05D007760 1.6e-87 327.4 288 55.9
Cre02.g145050 Chlamydomonas reinhardtii HOM05D006216 ORTHO05D007760 3.3e-85 319.7 291 54.3
Sabra09G0013700 Salix brachista HOM05D006216 ORTHO05D007760 2.4e-83 313.5 294 58.2
PRCOL_00004294 Prasinoderma coloniale HOM05D006216 ORTHO05D007760 9.0e-83 311.6 311 49.2
SEGI_15556 Sequoiadendron giganteum HOM05D006216 ORTHO05D007760 2.1e-76 290.4 190 73.2
Glyma.17G179800 Glycine max HOM05D006216 ORTHO05D007760 6.2e-68 262.3 181 72.9
Hund17544 Selenicereus undatus HOM05D006216 ORTHO05D007760 8.7e-54 215.3 185 58.9
SEGI_04634 Sequoiadendron giganteum HOM05D006216 ORTHO05D007760 3.8e-49 199.9 127 70.1
FAN26G0546 Fragaria x ananassa HOM05D006216 ORTHO05D010609 3.4e-42 176.8 114 77.2
SMO332G0003 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 1.9e-32 144.4 102 65.7
Oeu063625.1 Olea europaea HOM05D006216 ORTHO05D007760 7.5e-29 132.5 134 55.2
SMO332G0042 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 3.5e-26 123.6 131 51.1
Ca_29165_v3 Cicer arietinum L. HOM05D006216 ORTHO05D007760 1.2e-21 108.6 162 41.4
Hund00952 Selenicereus undatus HOM05D006216 ORTHO05D007760 6.3e-20 102.8 74 66.2
SMO198G0007 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 2.7e-18 97.4 106 47.2
DCAR_006325 Daucus carota HOM05D006216 ORTHO05D007760 6.1e-15 86.3 52 76.9


User provided reference genes

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