Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0004125 Camellia sinensis var. sinensis HOM05D001467 ORTHO05D001447 1.6e-97 359.4 180 100.0
CSS0033885 Camellia sinensis var. sinensis HOM05D001467 ORTHO05D001447 5.5e-77 291.2 154 96.8
Actinidia36855 Actinidia chinensis HOM05D001467 ORTHO05D001447 1.8e-48 196.4 160 67.5
Dinv23256 Davidia involucrata HOM05D001467 ORTHO05D001447 3.2e-45 185.7 136 74.3
Rhsim12G0182900 Rhododendron simsii HOM05D001467 ORTHO05D001447 9.4e-45 184.1 152 67.1
Lsat_1_v5_gn_5_9161 Lactuca sativa HOM05D001467 ORTHO05D001447 4.1e-40 168.7 150 66.7
FvH4_6g27970 Fragaria vesca HOM05D001467 ORTHO05D001447 2.0e-39 166.4 146 64.4
FAN14G5604 Fragaria x ananassa HOM05D001467 ORTHO05D001447 2.0e-39 166.4 146 64.4
FAN05G1198 Fragaria x ananassa HOM05D001467 ORTHO05D001447 2.7e-39 166.0 143 63.6
Thecc.06G132800 Theobroma cacao HOM05D001467 ORTHO05D001447 3.5e-39 165.6 140 64.3
Ciclev10025695m.g Citrus clementina HOM05D001467 ORTHO05D001447 5.9e-39 164.9 136 66.2
COL.COLO4_30894 Corchorus olitorius HOM05D001467 ORTHO05D001447 7.7e-39 164.5 132 68.2
Gohir.D05G145300 Gossypium hirsutum HOM05D001467 ORTHO05D001447 1.7e-38 163.3 124 66.1
MD09G1230800 Malus domestica HOM05D001467 ORTHO05D001447 1.7e-38 163.3 152 63.2
Gorai.009G149200 Gossypium raimondii HOM05D001467 ORTHO05D001447 2.2e-38 162.9 124 66.1
PSO063G0476 Papaver somniferum HOM05D001467 ORTHO05D001447 3.8e-38 162.2 107 72.0
FAN09G2518 Fragaria x ananassa HOM05D001467 ORTHO05D001447 5.0e-38 161.8 149 62.4
QL93p2008_0078 Quercus lobata HOM05D001467 ORTHO05D001447 5.0e-38 161.8 83 92.8
Gohir.A05G142900 Gossypium hirsutum HOM05D001467 ORTHO05D001447 6.5e-38 161.4 117 68.4
Prupe.3G107000 Prunus persica HOM05D001467 ORTHO05D001447 6.5e-38 161.4 158 62.0
DCAR_025616 Daucus carota HOM05D001467 ORTHO05D001447 8.5e-38 161.0 149 67.1
CANSAT64G0106 Cannabis sativa HOM05D001467 ORTHO05D001447 1.5e-37 160.2 140 64.3
Duzib160G0460 Durio zibethinus HOM05D001467 ORTHO05D001447 1.9e-37 159.8 129 63.6
GSVIVG01016062001 Vitis vinifera HOM05D001467 ORTHO05D001447 2.5e-37 159.5 161 58.4
Medtr2g105480 Medicago truncatula HOM05D001467 ORTHO05D001447 5.5e-37 158.3 119 69.7
Atru.chr1.2752 Acer truncatum HOM05D001467 ORTHO05D001447 7.2e-37 157.9 136 65.4
MSTRG.22831 Avicennia marina HOM05D001467 ORTHO05D001447 9.4e-37 157.5 131 66.4
Psat5g307720 Pisum sativum HOM05D001467 ORTHO05D001447 9.4e-37 157.5 130 66.2
RcHm_v2.0_Chr2g0131521 Rosa chinensis HOM05D001467 ORTHO05D001447 1.2e-36 157.1 157 58.6
THA.LOC104813943 Tarenaya hassleriana HOM05D001467 ORTHO05D001447 1.2e-36 157.1 164 58.5
Solyc03g117850.4 Solanum lycopersicum HOM05D001467 ORTHO05D001447 2.7e-36 156.0 154 57.8
Nitab4.5_0004194g0110 Nicotiana tabacum HOM05D001467 ORTHO05D001447 3.6e-36 155.6 137 61.3
PGR031G3156 Punica granatum HOM05D001467 ORTHO05D001447 3.6e-36 155.6 147 60.5
HanXRQChr08g0235911 Helianthus annuus HOM05D001467 ORTHO05D001447 4.7e-36 155.2 138 61.6
Manes.11G071500 Manihot esculenta HOM05D001467 ORTHO05D001447 4.7e-36 155.2 140 57.9
Cpa.g.sc953.1 Carica papaya HOM05D001467 ORTHO05D001447 6.1e-36 154.8 151 57.6
EL10Ac8g19451 Beta vulgaris HOM05D001467 ORTHO05D001447 8.0e-36 154.5 116 68.1
Potri.001G037300 Populus trichocarpa HOM05D001467 ORTHO05D001447 8.0e-36 154.5 143 61.5
CDE05G3594 Ceratophyllum demersum HOM05D001467 ORTHO05D001447 1.0e-35 154.1 150 62.7
Cc04_g05490 Coffea canephora HOM05D001467 ORTHO05D001447 1.0e-35 154.1 123 63.4
ECA246G3093 Erigeron canadensis HOM05D001467 ORTHO05D001214 1.0e-35 154.1 96 79.2
Ca_01003_v3 Cicer arietinum L. HOM05D001467 ORTHO05D001447 1.4e-35 153.7 90 81.1
Hma1.2p1_0338F.1_g129610 Hydrangea macrophylla HOM05D001467 ORTHO05D001447 1.4e-35 153.7 93 80.6
Lj3g0001514 Lotus japonicus HOM05D001467 ORTHO05D001447 1.4e-35 153.7 90 82.2
Sopen03g036770 Solanum pennellii HOM05D001467 ORTHO05D001447 1.4e-35 153.7 154 57.8
ClCG09G003540 Citrullus lanatus HOM05D001467 ORTHO05D001447 1.8e-35 153.3 126 67.5
Haze_15247 Corylus avellana HOM05D001467 ORTHO05D001447 1.8e-35 153.3 147 60.5
MBI16_g44475_MAGBIO Magnolia biondii HOM05D001467 ORTHO05D001447 2.3e-35 152.9 136 62.5
arahy.Tifrunner.gnm1.ann1.GBG79Z Arachis hypogaea HOM05D001467 ORTHO05D001447 3.0e-35 152.5 101 75.2
Nitab4.5_0007293g0030 Nicotiana tabacum HOM05D001467 ORTHO05D001447 3.0e-35 152.5 137 59.9
Sed0024190 Sechium edule HOM05D001467 ORTHO05D001447 3.0e-35 152.5 117 69.2
TWI75G1879 Tripterygium wilfordii HOM05D001467 ORTHO05D001447 3.0e-35 152.5 132 63.6
TAR383G1091 Trochodendron aralioides HOM05D001467 ORTHO05D001447 4.0e-35 152.1 104 72.1
Aqoxy7G02957 Aquilegia oxysepala HOM05D001467 ORTHO05D001447 5.2e-35 151.8 139 59.7
Peaxi162Scf00314g00937 Petunia axillaris HOM05D001467 ORTHO05D001447 5.2e-35 151.8 144 61.1
Phvul.005G184300 Phaseolus vulgaris HOM05D001467 ORTHO05D001447 5.2e-35 151.8 89 82.0
VMungo1080G1820 Vigna mungo HOM05D001467 ORTHO05D001447 6.8e-35 151.4 108 71.3
Carub.0002s1988 Capsella rubella HOM05D001467 ORTHO05D001447 1.5e-34 150.2 147 56.5
CAN.G1008.24 Capsicum annuum HOM05D001467 ORTHO05D001447 2.6e-34 149.4 115 69.6
CsaV3_7G031660 Cucumis sativus L. HOM05D001467 ORTHO05D001447 2.6e-34 149.4 142 61.3
Glyma.13G371900 Glycine max HOM05D001467 ORTHO05D001447 2.6e-34 149.4 89 80.9
HPP92_010777 Vanilla planifolia HOM05D001467 ORTHO05D001447 3.4e-34 149.1 89 78.7
Cfa004165 Carpinus fangiana HOM05D001467 ORTHO05D000218 5.7e-34 148.3 147 58.5
Os04g0658300 Oryza sativa ssp. japonica HOM05D001467 ORTHO05D001447 5.7e-34 148.3 142 57.0
Aa31LG4G3380 Aethionema arabicum HOM05D001467 ORTHO05D001447 7.5e-34 147.9 139 58.3
Migut.I00643 Erythranthe guttata HOM05D001467 ORTHO05D001447 7.5e-34 147.9 107 69.2
Sp5g28070 Schrenkiella parvula HOM05D001467 ORTHO05D001447 1.7e-33 146.7 149 57.0
arahy.Tifrunner.gnm1.ann1.8C6B4V Arachis hypogaea HOM05D001467 ORTHO05D001447 2.8e-33 146.0 101 73.3
AT1G73110 Arabidopsis thaliana HOM05D001467 ORTHO05D001447 6.3e-33 144.8 147 54.4
ATR0580G322 Amborella trichopoda HOM05D001467 ORTHO05D001447 1.8e-32 143.3 92 72.8
AL2G32860 Arabidopsis lyrata HOM05D001467 ORTHO05D001447 1.8e-32 143.3 147 55.1
A07p39090 Brassica napus HOM05D001467 ORTHO05D001447 2.4e-32 142.9 89 75.3
BraA07t31460Z Brassica rapa HOM05D001467 ORTHO05D001447 2.4e-32 142.9 89 75.3
SGA_v2.0_scaffold5G02826 Striga asiatica HOM05D001467 ORTHO05D001447 3.1e-32 142.5 141 61.0
Thhalv10018573m.g Eutrema salsugineum HOM05D001467 ORTHO05D001447 7.0e-32 141.4 82 79.3
Lalb_Chr24g0392761 Lupinus albus HOM05D001467 ORTHO05D001447 4.5e-31 138.7 90 72.2
PSO170G6584 Papaver somniferum HOM05D001467 ORTHO05D001447 7.7e-31 137.9 95 68.4
Hund22384 Selenicereus undatus HOM05D001467 ORTHO05D001447 1.7e-30 136.7 181 48.1
C06p47300 Brassica napus HOM05D001467 ORTHO05D001447 2.3e-30 136.3 148 54.1
BolC6t39769H Brassica oleracea HOM05D001467 ORTHO05D001447 2.3e-30 136.3 148 54.1
SEGI_16259 Sequoiadendron giganteum HOM05D001467 ORTHO05D001447 2.9e-30 136.0 143 52.4
CBR_g38065 Chara braunii HOM05D000019 ORTHO05D000002 1.5e-29 133.7 81 74.1
Pp3c4_22100 Physcomitrium patens HOM05D001467 ORTHO05D001447 9.5e-29 131.0 109 60.6
AagrBONN_evm.TU.Sc2ySwM_344.1576 Anthoceros agrestis HOM05D001467 ORTHO05D001447 1.2e-28 130.6 93 66.7
Sabra01G0026100 Salix brachista HOM05D001467 ORTHO05D001447 1.6e-28 130.2 79 77.2
Mapoly0031s0065 Marchantia polymorpha HOM05D001467 ORTHO05D001447 3.6e-28 129.0 90 68.9
SMO356G0725 Selaginella moellendorffii HOM05D001467 ORTHO05D001447 1.4e-27 127.1 84 70.2
Lj9C489T7 Lonicera japonica HOM05D001467 ORTHO05D001447 1.3e-22 110.5 114 59.6
CiPaw.02G024200 Carya illinoinensis HOM05D001467 ORTHO05D001447 1.5e-21 107.1 53 94.3
Thecc.06G132500 Theobroma cacao HOM05D001467 ORTHO05D001447 4.3e-21 105.5 94 61.7
Eucgr.J03141 Eucalyptus grandis HOM05D001467 ORTHO05D001447 7.3e-21 104.8 60 81.7
AUR62022403 Chenopodium quinoa HOM05D001467 ORTHO05D001447 3.0e-19 99.4 68 69.1
AUR62043543 Chenopodium quinoa HOM05D001467 ORTHO05D001447 1.2e-18 97.4 68 67.6
Ah.14g085750 Amaranthus hybridus HOM05D000506 ORTHO05D000369 2.0e-15 86.7 104 49.0
Sabra03G0137300 Salix brachista HOM05D000327 ORTHO05D000218 1.1e-13 80.9 62 64.5
MCO05G437 Micromonas commoda HOM05D001467 ORTHO05D001447 2.2e-09 66.6 93 41.9
Actinidia08925 Actinidia chinensis HOM05D008232 ORTHO05D010390 6.0e-07 58.5 62 54.8


User provided reference genes

Program Settings