Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0004113 Camellia sinensis var. sinensis HOM05D007388 ORTHO05D009421 1.8e-104 382.9 191 100.0
TAR383G1008 Trochodendron aralioides HOM05D007388 ORTHO05D009421 4.7e-65 251.9 193 65.8
Dinv41838 Davidia involucrata HOM05D007388 ORTHO05D009421 5.2e-64 248.4 178 70.2
Actinidia25694 Actinidia chinensis HOM05D007388 ORTHO05D009421 1.5e-63 246.9 168 75.0
Nn8g38703 Nelumbo nucifera HOM05D007388 ORTHO05D009421 4.9e-62 241.9 183 66.1
CiPaw.16G070200 Carya illinoinensis HOM05D007388 ORTHO05D009421 4.3e-58 228.8 191 62.8
COL.COLO4_21128 Corchorus olitorius HOM05D007388 ORTHO05D009421 4.3e-58 228.8 187 60.4
Gohir.A05G039100 Gossypium hirsutum HOM05D007388 ORTHO05D009421 4.3e-58 228.8 160 69.4
PGR044G0912 Punica granatum HOM05D007388 ORTHO05D009421 7.3e-58 228.0 175 62.3
RcHm_v2.0_Chr6g0311651 Rosa chinensis HOM05D007388 ORTHO05D009421 9.6e-58 227.6 193 59.1
GSVIVG01035454001 Vitis vinifera HOM05D007388 ORTHO05D009421 1.2e-57 227.3 187 63.1
Eucgr.C03150 Eucalyptus grandis HOM05D007388 ORTHO05D009421 1.6e-57 226.9 189 59.8
Peaxi162Scf00596g00105 Petunia axillaris HOM05D007388 ORTHO05D009421 1.6e-57 226.9 168 66.1
Manes.16G084900 Manihot esculenta HOM05D007388 ORTHO05D009421 2.8e-57 226.1 189 59.3
Gohir.D05G040600 Gossypium hirsutum HOM05D007388 ORTHO05D009421 3.6e-57 225.7 160 68.8
Duzib168G1804 Durio zibethinus HOM05D007388 ORTHO05D009421 4.7e-57 225.3 184 62.5
QL02p016663 Quercus lobata HOM05D007388 ORTHO05D009421 4.7e-57 225.3 182 62.1
Ciclev10009451m.g Citrus clementina HOM05D007388 ORTHO05D009421 8.1e-57 224.6 186 62.4
MSTRG.25983 Avicennia marina HOM05D007388 ORTHO05D009421 3.1e-56 222.6 157 68.2
Nitab4.5_0001705g0020 Nicotiana tabacum HOM05D007388 ORTHO05D009421 4.0e-56 222.2 176 63.1
CsaV3_4G036020 Cucumis sativus L. HOM05D007388 ORTHO05D009421 1.2e-55 220.7 184 59.8
Migut.A00083 Erythranthe guttata HOM05D007388 ORTHO05D009421 1.2e-55 220.7 180 62.2
Potri.006G221900 Populus trichocarpa HOM05D007388 ORTHO05D009421 1.2e-55 220.7 187 58.8
Atru.chr7.1857 Acer truncatum HOM05D007388 ORTHO05D009421 2.0e-55 219.9 186 59.1
CAN.G246.5 Capsicum annuum HOM05D007388 ORTHO05D009421 2.6e-55 219.5 164 65.9
Rhsim10G0152000 Rhododendron simsii HOM05D007388 ORTHO05D009421 5.8e-55 218.4 145 72.4
TWI63G1062 Tripterygium wilfordii HOM05D007388 ORTHO05D009421 9.9e-55 217.6 182 58.8
Sabra06G0171500 Salix brachista HOM05D007388 ORTHO05D009421 1.3e-54 217.2 183 59.6
Lalb_Chr11g0063321 Lupinus albus HOM05D007388 ORTHO05D009421 1.7e-54 216.9 187 58.8
MELO3C016910.2 Cucumis melo HOM05D007388 ORTHO05D009421 2.9e-54 216.1 184 58.7
Cfa018015 Carpinus fangiana HOM05D007388 ORTHO05D009421 8.4e-54 214.5 202 56.9
MD15G1051600 Malus domestica HOM05D007388 ORTHO05D009421 8.4e-54 214.5 184 60.3
Medtr3g104980 Medicago truncatula HOM05D007388 ORTHO05D009421 1.1e-53 214.2 176 59.7
FvH4_2g31130 Fragaria vesca HOM05D007388 ORTHO05D009421 3.2e-53 212.6 194 56.7
Sopen06g034360 Solanum pennellii HOM05D007388 ORTHO05D009421 4.2e-53 212.2 165 66.1
PGSC0003DMG400027673 Solanum tuberosum HOM05D007388 ORTHO05D009421 5.4e-53 211.8 165 66.7
THA.LOC104799581 Tarenaya hassleriana HOM05D007388 ORTHO05D009421 7.1e-53 211.5 150 62.7
FAN24G3326 Fragaria x ananassa HOM05D007388 ORTHO05D009421 9.3e-53 211.1 194 56.7
Sed0027665 Sechium edule HOM05D007388 ORTHO05D009421 2.1e-52 209.9 165 61.8
Solyc06g082970.3 Solanum lycopersicum HOM05D007388 ORTHO05D009421 2.7e-52 209.5 165 64.8
BcaB08g36472 Brassica carinata HOM05D007388 ORTHO05D009421 3.5e-52 209.1 187 55.1
ECA240G1505 Erigeron canadensis HOM05D007388 ORTHO05D009421 7.8e-52 208.0 184 56.5
AL6G32850 Arabidopsis lyrata HOM05D007388 ORTHO05D009421 1.0e-51 207.6 191 56.0
FAN20G0472 Fragaria x ananassa HOM05D007388 ORTHO05D009421 1.0e-51 207.6 188 57.4
Thhalv10014636m.g Eutrema salsugineum HOM05D007388 ORTHO05D009421 1.7e-51 206.8 191 55.5
ClCG05G015710 Citrullus lanatus HOM05D007388 ORTHO05D009421 8.7e-51 204.5 206 53.9
Sp6g23310 Schrenkiella parvula HOM05D007388 ORTHO05D009421 1.5e-50 203.8 190 55.3
ATR0598G070 Amborella trichopoda HOM05D007388 ORTHO05D009421 1.9e-50 203.4 144 66.7
BcaC04g19512 Brassica carinata HOM05D007388 ORTHO05D009421 1.9e-50 203.4 187 53.5
A10p18840 Brassica napus HOM05D007388 ORTHO05D009421 1.9e-50 203.4 187 53.5
C09p54850 Brassica napus HOM05D007388 ORTHO05D009421 1.9e-50 203.4 187 53.5
BolC9t58346H Brassica oleracea HOM05D007388 ORTHO05D009421 1.9e-50 203.4 187 53.5
FAN27G0155 Fragaria x ananassa HOM05D007388 ORTHO05D009421 2.5e-50 203.0 213 52.6
MBI19_g11844_MAGBIO Magnolia biondii HOM05D007388 ORTHO05D009421 2.5e-50 203.0 194 56.7
AT5G21430 Arabidopsis thaliana HOM05D007388 ORTHO05D009421 3.3e-50 202.6 192 56.2
HanXRQChr04g0097861 Helianthus annuus HOM05D007388 ORTHO05D009421 3.3e-50 202.6 191 57.6
Psat5g102720 Pisum sativum HOM05D007388 ORTHO05D009421 3.3e-50 202.6 187 52.4
Glyma.04G055400 Glycine max HOM05D007388 ORTHO05D009421 4.3e-50 202.2 186 55.9
AUR62009088 Chenopodium quinoa HOM05D007388 ORTHO05D009421 5.6e-50 201.8 152 64.5
BraA10t43964Z Brassica rapa HOM05D007388 ORTHO05D009421 7.3e-50 201.4 187 53.5
DCAR_003716 Daucus carota HOM05D007388 ORTHO05D009421 9.6e-50 201.1 154 61.0
Phvul.009G081500 Phaseolus vulgaris HOM05D007388 ORTHO05D009421 1.3e-49 200.7 185 55.7
AUR62020582 Chenopodium quinoa HOM05D007388 ORTHO05D009421 1.6e-49 200.3 152 63.8
TPR.G3529 Trifolium pratense HOM05D007388 ORTHO05D009421 1.6e-49 200.3 191 52.4
Carub.0006s1952 Capsella rubella HOM05D007388 ORTHO05D009421 2.8e-49 199.5 193 53.9
VMungo1309G3057 Vigna mungo HOM05D007388 ORTHO05D009421 4.8e-49 198.7 165 60.0
Lj1g0010451 Lotus japonicus HOM05D007388 ORTHO05D009421 6.2e-49 198.4 182 54.9
Glyma.06G055600 Glycine max HOM05D007388 ORTHO05D009421 8.1e-49 198.0 186 54.3
CARHR191660 Cardamine hirsuta HOM05D007388 ORTHO05D009421 1.1e-48 197.6 150 60.0
Oeu000765.1 Olea europaea HOM05D007388 ORTHO05D009421 3.1e-48 196.1 261 43.3
Thecc.09G062100 Theobroma cacao HOM05D007388 ORTHO05D009421 4.0e-48 195.7 155 61.9
Aa31LG1G13520 Aethionema arabicum HOM05D007388 ORTHO05D009421 1.5e-47 193.7 209 50.7
CDE06G1148 Ceratophyllum demersum HOM05D007388 ORTHO05D009421 4.5e-47 192.2 151 62.3
Gorai.009G041100 Gossypium raimondii HOM05D007388 ORTHO05D009421 1.7e-46 190.3 161 60.2
arahy.Tifrunner.gnm1.ann1.P6UV73 Arachis hypogaea HOM05D007388 ORTHO05D009421 3.8e-46 189.1 166 59.0
CANSAT25G2576 Cannabis sativa HOM05D007388 ORTHO05D009421 1.1e-45 187.6 151 61.6
PSO421G0687 Papaver somniferum HOM05D007388 ORTHO05D009421 1.1e-45 187.6 159 59.7
Atru.BG.20.p Acer truncatum HOM05D007388 ORTHO05D009421 1.9e-45 186.8 127 66.9
Lj7C227T7 Lonicera japonica HOM05D007388 ORTHO05D009421 1.9e-45 186.8 157 61.1
Cc08_g01260 Coffea canephora HOM05D007388 ORTHO05D009421 7.1e-45 184.9 136 64.7
Prupe.1G405600 Prunus persica HOM05D007388 ORTHO05D009421 4.6e-44 182.2 151 58.9
arahy.Tifrunner.gnm1.ann1.044LWD Arachis hypogaea HOM05D000560 ORTHO05D000417 6.7e-43 178.3 166 57.2
vmacro12914 Vaccinium macrocarpon HOM05D007388 ORTHO05D009421 1.1e-42 177.6 195 52.8
Lsat_1_v5_gn_7_58400 Lactuca sativa HOM05D007388 ORTHO05D009421 2.5e-42 176.4 136 63.2
Lj7C225T7 Lonicera japonica HOM05D007388 ORTHO05D009421 7.4e-42 174.9 157 59.2
EL10Ac2g03792 Beta vulgaris HOM05D007388 ORTHO05D009421 1.3e-41 174.1 128 64.8
CDE07G0202 Ceratophyllum demersum HOM05D007388 ORTHO05D001048 2.8e-41 172.9 149 57.7
Os12g0498500 Oryza sativa ssp. japonica HOM05D007388 ORTHO05D009421 2.8e-41 172.9 145 57.9
Aqoxy7G01075 Aquilegia oxysepala HOM05D007388 ORTHO05D009421 8.1e-41 171.4 145 61.4
Zm00001eb409580 Zea mays HOM05D007388 ORTHO05D009421 1.8e-40 170.2 145 57.2
Ca_15836_v3 Cicer arietinum L. HOM05D007388 ORTHO05D009421 4.5e-39 165.6 132 58.3
Nitab4.5_0000268g0090 Nicotiana tabacum HOM05D007388 ORTHO05D009421 1.3e-38 164.1 175 50.3
Hma1.2p1_0231F.1_g097390 Hydrangea macrophylla HOM05D007388 ORTHO05D009421 3.1e-24 116.3 82 69.5
unitig_4.g30329 Utricularia gibba HOM05D007388 ORTHO05D009421 1.2e-23 114.4 129 51.2
AagrBONN_evm.TU.Sc2ySwM_368.3296 Anthoceros agrestis HOM05D007388 ORTHO05D009421 4.6e-20 102.4 170 35.9
Pp3c4_14700 Physcomitrium patens HOM05D007388 ORTHO05D009421 3.1e-16 89.7 192 32.8
Pp3c12_9640 Physcomitrium patens HOM05D007388 ORTHO05D009421 9.1e-16 88.2 162 34.6
Mapoly0129s0003 Marchantia polymorpha HOM05D007388 ORTHO05D009421 1.2e-15 87.8 185 31.9
BNapus_Darmor_BZH_scaffold_38p01020 Brassica napus HOM05D007388 ORTHO05D009421 4.8e-09 65.9 65 49.2
SMO223G0044 Selaginella moellendorffii HOM05D007480 ORTHO05D009460 4.5e-07 59.3 104 33.7


User provided reference genes

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