Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0004107 Camellia sinensis var. sinensis HOM05D004512 ORTHO05D005355 8.0e-57 223.4 103 100.0
Hma1.2p1_0653F.1_g196320 Hydrangea macrophylla HOM05D004512 ORTHO05D005355 1.8e-53 212.2 102 95.1
CSS0044395 Camellia sinensis var. sinensis HOM05D004512 ORTHO05D005355 1.2e-52 209.5 100 96.0
vmacro12793 Vaccinium macrocarpon HOM05D004512 ORTHO05D005355 2.7e-52 208.4 101 93.1
Cc04_g07140 Coffea canephora HOM05D004512 ORTHO05D005355 5.9e-52 207.2 101 90.1
Rhsim12G0143400 Rhododendron simsii HOM05D004512 ORTHO05D005355 1.3e-51 206.1 102 89.2
Oeu046994.1 Olea europaea HOM05D004512 ORTHO05D005355 1.1e-50 203.0 103 88.3
Cfa019782 Carpinus fangiana HOM05D004512 ORTHO05D005355 2.5e-50 201.8 101 89.1
Haze_18669 Corylus avellana HOM05D004512 ORTHO05D005355 2.5e-50 201.8 101 89.1
TAR374G1478 Trochodendron aralioides HOM05D004512 ORTHO05D005355 3.3e-50 201.4 103 89.3
MSTRG.22945 Avicennia marina HOM05D004512 ORTHO05D005355 8.0e-49 196.8 102 85.3
PGSC0003DMG400023110 Solanum tuberosum HOM05D004512 ORTHO05D005355 1.0e-48 196.4 99 86.9
Nitab4.5_0006638g0020 Nicotiana tabacum HOM05D004512 ORTHO05D005355 1.8e-48 195.7 99 87.9
Nitab4.5_0000208g0260 Nicotiana tabacum HOM05D004512 ORTHO05D005355 2.3e-48 195.3 99 86.9
QL10p025263 Quercus lobata HOM05D004512 ORTHO05D005355 2.3e-48 195.3 99 89.9
Sopen12g018390 Solanum pennellii HOM05D004512 ORTHO05D005355 2.3e-48 195.3 99 87.9
CiPaw.16G085900 Carya illinoinensis HOM05D004512 ORTHO05D005355 5.2e-48 194.1 101 86.1
MELO3C002086.2 Cucumis melo HOM05D004512 ORTHO05D005355 6.8e-48 193.7 100 88.0
CsaV3_1G006620 Cucumis sativus L. HOM05D004512 ORTHO05D005355 6.8e-48 193.7 100 88.0
Manes.01G011800 Manihot esculenta HOM05D004512 ORTHO05D005355 6.8e-48 193.7 102 86.3
Prupe.5G221100 Prunus persica HOM05D004512 ORTHO05D005355 8.9e-48 193.4 102 85.3
Peaxi162Scf00634g00116 Petunia axillaris HOM05D004512 ORTHO05D005355 1.2e-47 193.0 101 85.1
Manes.05G137500 Manihot esculenta HOM05D004512 ORTHO05D005355 2.0e-47 192.2 102 85.3
EL10Ac5g11436 Beta vulgaris HOM05D004512 ORTHO05D005355 2.6e-47 191.8 102 85.3
CiPaw.15G130400 Carya illinoinensis HOM05D004512 ORTHO05D005355 2.6e-47 191.8 101 84.2
CANSAT80G1137 Cannabis sativa HOM05D004512 ORTHO05D005355 3.4e-47 191.4 102 82.4
Potri.012G056900 Populus trichocarpa HOM05D004512 ORTHO05D005355 3.4e-47 191.4 102 83.3
Aqoxy3G00301 Aquilegia oxysepala HOM05D004512 ORTHO05D005355 4.4e-47 191.0 98 86.7
CANSAT80G2616 Cannabis sativa HOM05D004512 ORTHO05D005355 4.4e-47 191.0 99 84.8
Potri.015G054700 Populus trichocarpa HOM05D004512 ORTHO05D005355 4.4e-47 191.0 102 84.3
Atru.chr9.839 Acer truncatum HOM05D004512 ORTHO05D005355 9.8e-47 189.9 102 86.3
Sabra12G0040400 Salix brachista HOM05D004512 ORTHO05D005355 1.7e-46 189.1 102 83.3
CAN.G790.56 Capsicum annuum HOM05D004512 ORTHO05D005355 2.2e-46 188.7 96 86.5
CAN.G121.2 Capsicum annuum HOM05D004512 ORTHO05D005355 2.9e-46 188.3 96 85.4
SalBow5G1005 Salvia bowleyana HOM05D004512 ORTHO05D005355 2.9e-46 188.3 102 82.4
HPP92_020802 Vanilla planifolia HOM05D004512 ORTHO05D005355 2.9e-46 188.3 98 85.7
PGR142G1335 Punica granatum HOM05D004512 ORTHO05D005355 3.7e-46 188.0 102 85.3
DCAR_011353 Daucus carota HOM05D004512 ORTHO05D005355 4.9e-46 187.6 99 86.9
Migut.I00347 Erythranthe guttata HOM05D004512 ORTHO05D005355 4.9e-46 187.6 102 81.4
Gohir.A09G047600 Gossypium hirsutum HOM05D004512 ORTHO05D005355 4.9e-46 187.6 101 84.2
Gohir.D09G048700 Gossypium hirsutum HOM05D004512 ORTHO05D005355 4.9e-46 187.6 101 84.2
AUR62029861 Chenopodium quinoa HOM05D004512 ORTHO05D005355 6.4e-46 187.2 102 83.3
MD06G1215900 Malus domestica HOM05D004512 ORTHO05D005355 8.3e-46 186.8 98 87.8
MD14G1226500 Malus domestica HOM05D004512 ORTHO05D005355 8.3e-46 186.8 98 87.8
Thecc.03G034700 Theobroma cacao HOM05D004512 ORTHO05D005355 8.3e-46 186.8 101 84.2
AT3G18410 Arabidopsis thaliana HOM05D004512 ORTHO05D005355 1.1e-45 186.4 102 81.4
Carub.0003s1819 Capsella rubella HOM05D004512 ORTHO05D005355 1.1e-45 186.4 102 81.4
PSO782G2824 Papaver somniferum HOM05D004512 ORTHO05D005355 1.1e-45 186.4 101 80.2
SGA_v2.0_scaffold25G10991 Striga asiatica HOM05D004512 ORTHO05D005355 1.1e-45 186.4 102 81.4
THA.LOC104821841 Tarenaya hassleriana HOM05D004512 ORTHO05D005355 1.1e-45 186.4 107 81.3
Aa31LG8G5240 Aethionema arabicum HOM05D004512 ORTHO05D005355 1.4e-45 186.0 102 81.4
CARHR039120 Cardamine hirsuta HOM05D004512 ORTHO05D005355 1.4e-45 186.0 102 81.4
Ca_25495_v3 Cicer arietinum L. HOM05D004512 ORTHO05D005355 1.4e-45 186.0 101 84.2
DCAR_015141 Daucus carota HOM05D004512 ORTHO05D005355 1.4e-45 186.0 103 84.5
Eucgr.K02221 Eucalyptus grandis HOM05D004512 ORTHO05D005355 1.4e-45 186.0 102 82.4
TAR371G0608 Trochodendron aralioides HOM05D004512 ORTHO05D005355 1.4e-45 186.0 95 88.4
Thhalv10022379m.g Eutrema salsugineum HOM05D004512 ORTHO05D005355 1.9e-45 185.7 102 81.4
Solyc12g036790.2 Solanum lycopersicum HOM05D004512 ORTHO05D005355 1.9e-45 185.7 96 86.5
TPR.G27937 Trifolium pratense HOM05D004512 ORTHO05D005355 1.9e-45 185.7 101 84.2
Aa31LG10G4840 Aethionema arabicum HOM05D004512 ORTHO05D005355 2.4e-45 185.3 103 80.6
Sp3g16520 Schrenkiella parvula HOM05D004512 ORTHO05D005355 2.4e-45 185.3 102 81.4
SGA_v2.0_scaffold19G08815 Striga asiatica HOM05D004512 ORTHO05D005355 2.4e-45 185.3 100 83.0
THA.LOC104820396 Tarenaya hassleriana HOM05D004512 ORTHO05D005355 2.4e-45 185.3 107 80.4
Duzib205G0602 Durio zibethinus HOM05D004512 ORTHO05D005355 3.2e-45 184.9 101 84.2
Duzib205G1322 Durio zibethinus HOM05D004512 ORTHO05D005355 3.2e-45 184.9 101 84.2
Hund02392 Selenicereus undatus HOM05D004512 ORTHO05D005355 3.2e-45 184.9 101 81.2
Sc12g0007720 Simmondsia chinensis HOM05D004512 ORTHO05D005355 3.2e-45 184.9 102 84.3
AUR62025859 Chenopodium quinoa HOM05D004512 ORTHO05D005355 4.1e-45 184.5 102 82.4
Gohir.A08G094600 Gossypium hirsutum HOM05D004512 ORTHO05D005355 4.1e-45 184.5 101 82.2
AL3G31700 Arabidopsis lyrata HOM05D004512 ORTHO05D005355 5.4e-45 184.1 102 80.4
BcaB04g20765 Brassica carinata HOM05D004512 ORTHO05D005355 5.4e-45 184.1 102 80.4
Duzib068G0917 Durio zibethinus HOM05D004512 ORTHO05D005355 5.4e-45 184.1 101 83.2
Thhalv10011884m.g Eutrema salsugineum HOM05D004512 ORTHO05D005355 5.4e-45 184.1 102 80.4
Sed0004773 Sechium edule HOM05D004512 ORTHO05D005355 5.4e-45 184.1 101 81.2
BraA01t03675Z Brassica rapa HOM05D004512 ORTHO05D005355 7.0e-45 183.7 102 80.4
CARHR093770 Cardamine hirsuta HOM05D004512 ORTHO05D005355 7.0e-45 183.7 102 80.4
Sp1g36030 Schrenkiella parvula HOM05D004512 ORTHO05D005355 7.0e-45 183.7 102 81.4
BcaC09g48802 Brassica carinata HOM05D004512 ORTHO05D005355 9.2e-45 183.3 102 80.4
C01p45770 Brassica napus HOM05D004512 ORTHO05D005355 9.2e-45 183.3 102 80.4
BolC1t04540H Brassica oleracea HOM05D004512 ORTHO05D005355 9.2e-45 183.3 102 80.4
AT1G49140 Arabidopsis thaliana HOM05D004512 ORTHO05D005355 1.2e-44 183.0 99 81.8
arahy.Tifrunner.gnm1.ann1.HI5GUI Arachis hypogaea HOM05D004512 ORTHO05D005355 1.2e-44 183.0 97 87.6
arahy.Tifrunner.gnm1.ann1.K20T5Q Arachis hypogaea HOM05D004512 ORTHO05D005355 1.2e-44 183.0 97 87.6
Carub.0001s3830 Capsella rubella HOM05D004512 ORTHO05D005355 1.2e-44 183.0 99 81.8
VMungo0464G1721 Vigna mungo HOM05D004512 ORTHO05D005355 1.2e-44 183.0 101 84.2
Gohir.D08G105800 Gossypium hirsutum HOM05D004512 ORTHO05D005355 1.6e-44 182.6 101 82.2
Gorai.004G113100 Gossypium raimondii HOM05D004512 ORTHO05D005355 1.6e-44 182.6 101 82.2
Lalb_Chr22g0353061 Lupinus albus HOM05D004512 ORTHO05D005355 1.6e-44 182.6 102 83.3
Cpa.g.sc3.515 Carica papaya HOM05D004512 ORTHO05D005355 2.0e-44 182.2 107 81.3
ECA233G5146 Erigeron canadensis HOM05D004512 ORTHO05D005355 2.0e-44 182.2 99 84.8
BcaC01g03699 Brassica carinata HOM05D004512 ORTHO05D005355 2.7e-44 181.8 102 79.4
BolC3t17241H Brassica oleracea HOM05D004512 ORTHO05D005355 2.7e-44 181.8 102 79.4
ClCG00G005470 Citrullus lanatus HOM05D004512 ORTHO05D005355 2.7e-44 181.8 95 86.3
ClCG04G011140 Citrullus lanatus HOM05D004512 ORTHO05D005355 2.7e-44 181.8 95 86.3
Ciclev10022984m.g Citrus clementina HOM05D004512 ORTHO05D005355 2.7e-44 181.8 102 84.3
Glyma.09G184500 Glycine max HOM05D004512 ORTHO05D005355 2.7e-44 181.8 101 83.2
BcaC05g28630 Brassica carinata HOM05D004512 ORTHO05D005355 3.5e-44 181.4 102 80.4
A05p31210 Brassica napus HOM05D004512 ORTHO05D005355 3.5e-44 181.4 102 80.4
C05p47340 Brassica napus HOM05D004512 ORTHO05D005355 3.5e-44 181.4 102 80.4
BolC5t33461H Brassica oleracea HOM05D004512 ORTHO05D005355 3.5e-44 181.4 102 80.4
BraA05t21962Z Brassica rapa HOM05D004512 ORTHO05D005355 3.5e-44 181.4 102 80.4
Lsat_1_v5_gn_8_144301 Lactuca sativa HOM05D004512 ORTHO05D005355 3.5e-44 181.4 98 85.7
Phvul.004G157200 Phaseolus vulgaris HOM05D004512 ORTHO05D005355 3.5e-44 181.4 101 82.2
A03p40660 Brassica napus HOM05D004512 ORTHO05D005355 7.8e-44 180.3 102 78.4
BraA03t13222Z Brassica rapa HOM05D004512 ORTHO05D005355 7.8e-44 180.3 102 78.4
Lj2g0019547 Lotus japonicus HOM05D004512 ORTHO05D005355 7.8e-44 180.3 107 78.5
BcaB04g18985 Brassica carinata HOM05D004512 ORTHO05D005355 1.0e-43 179.9 102 78.4
Sed0021676 Sechium edule HOM05D004512 ORTHO05D005355 1.0e-43 179.9 96 83.3
HanXRQChr08g0226081 Helianthus annuus HOM05D004512 ORTHO05D005355 1.3e-43 179.5 102 81.4
AL1G56000 Arabidopsis lyrata HOM05D004512 ORTHO05D005355 1.7e-43 179.1 99 79.8
Gorai.006G061400 Gossypium raimondii HOM05D004512 ORTHO05D005355 1.7e-43 179.1 97 83.5
FvH4_5g12140 Fragaria vesca HOM05D004512 ORTHO05D005355 3.0e-43 178.3 108 77.8
FAN04G1546 Fragaria x ananassa HOM05D004512 ORTHO05D005355 3.0e-43 178.3 108 77.8
FAN08G0397 Fragaria x ananassa HOM05D004512 ORTHO05D005355 3.0e-43 178.3 108 77.8
FAN13G2727 Fragaria x ananassa HOM05D004512 ORTHO05D005355 3.0e-43 178.3 108 77.8
FAN18G2044 Fragaria x ananassa HOM05D004512 ORTHO05D005355 3.0e-43 178.3 108 77.8
unitig_26.g9674 Utricularia gibba HOM05D004512 ORTHO05D005355 3.0e-43 178.3 101 80.2
Glyma.07G091500 Glycine max HOM05D004512 ORTHO05D005355 5.0e-43 177.6 97 84.5
Lalb_Chr24g0397761 Lupinus albus HOM05D004512 ORTHO05D005355 5.0e-43 177.6 102 81.4
RcHm_v2.0_Chr7g0185431 Rosa chinensis HOM05D004512 ORTHO05D005355 5.0e-43 177.6 101 78.2
BcaB06g25886 Brassica carinata HOM05D004512 ORTHO05D005355 6.6e-43 177.2 102 78.4
A01p35940 Brassica napus HOM05D004512 ORTHO05D005355 6.6e-43 177.2 97 81.4
Psat1g037680 Pisum sativum HOM05D004512 ORTHO05D005355 8.6e-43 176.8 96 84.4
C03p49450 Brassica napus HOM05D004512 ORTHO05D005355 2.5e-42 175.3 97 80.4
Medtr6g084520 Medicago truncatula HOM05D004512 ORTHO05D005355 2.5e-42 175.3 97 82.5
ATR1125G038 Amborella trichopoda HOM05D004512 ORTHO05D005355 4.3e-42 174.5 95 81.1
CDE12G0498 Ceratophyllum demersum HOM05D004512 ORTHO05D005355 4.3e-42 174.5 102 80.4
FAN18G1297 Fragaria x ananassa HOM05D004512 ORTHO05D005355 5.6e-42 174.1 98 79.6
unitig_749.g13425 Utricularia gibba HOM05D004512 ORTHO05D005355 1.2e-41 172.9 101 78.2
TWI81G1036 Tripterygium wilfordii HOM05D004512 ORTHO05D005355 4.7e-41 171.0 100 78.0
Zm00001eb024750 Zea mays HOM05D004512 ORTHO05D005355 1.1e-40 169.9 105 74.3
Zm00001eb224900 Zea mays HOM05D004512 ORTHO05D005355 3.1e-40 168.3 98 76.5
Nitab4.5_0007985g0060 Nicotiana tabacum HOM05D004512 ORTHO05D005355 2.4e-37 158.7 84 79.8
HanXRQChr16g0517341 Helianthus annuus HOM05D004512 ORTHO05D005355 3.9e-35 151.4 84 83.3
TWI60G0557 Tripterygium wilfordii HOM05D004512 ORTHO05D005355 8.6e-35 150.2 94 73.4
COL.COLO4_05967 Corchorus olitorius HOM05D004512 ORTHO05D005355 1.1e-32 143.3 72 87.5
Nn3g17841 Nelumbo nucifera HOM05D004512 ORTHO05D005355 2.0e-31 139.0 68 88.2
CAN.G133.16 Capsicum annuum HOM05D004512 ORTHO05D005355 1.7e-27 125.9 90 67.8
CAN.G519.12 Capsicum annuum HOM05D004512 ORTHO05D005355 2.3e-27 125.6 71 77.5
AagrBONN_evm.TU.Sc2ySwM_117.17 Anthoceros agrestis HOM05D004512 ORTHO05D005355 3.0e-27 125.2 83 68.7
AagrBONN_evm.TU.Sc2ySwM_228.463 Anthoceros agrestis HOM05D004512 ORTHO05D005355 5.1e-27 124.4 83 68.7
Mapoly0004s0055 Marchantia polymorpha HOM05D004512 ORTHO05D005355 3.3e-26 121.7 82 65.9
MD15G1306200 Malus domestica HOM05D004512 ORTHO05D005355 7.3e-26 120.6 74 75.7
MD14G1197200 Malus domestica HOM05D004512 ORTHO05D005355 2.8e-25 118.6 74 81.1
Pp3c9_26150 Physcomitrium patens HOM05D004512 ORTHO05D005355 6.2e-25 117.5 86 64.0
CBR_g39222 Chara braunii HOM05D006171 ORTHO05D007294 2.2e-22 109.0 89 58.4
Prupe.2G045100 Prunus persica HOM05D004512 ORTHO05D005355 2.9e-22 108.6 64 78.1
Prupe.1G218000 Prunus persica HOM05D004512 ORTHO05D005355 6.4e-22 107.5 102 55.9
Os10g0576000 Oryza sativa ssp. japonica HOM05D004512 ORTHO05D005355 2.1e-20 102.4 53 79.2
SMO169G0039 Selaginella moellendorffii HOM05D004512 ORTHO05D005355 6.0e-20 100.9 84 51.2
BcaB02g11300 Brassica carinata HOM05D004512 ORTHO05D005355 2.1e-17 92.4 70 62.9
MCO12G018 Micromonas commoda HOM05D004512 ORTHO05D005355 2.8e-17 92.0 82 47.6
SEGI_01620 Sequoiadendron giganteum HOM05D004512 ORTHO05D005355 5.4e-13 77.8 50 72.0
Nitab4.5_0001194g0030 Nicotiana tabacum HOM05D004512 ORTHO05D005355 7.8e-12 73.9 57 66.7
Dinv09796 Davidia involucrata HOM05D004512 ORTHO05D005355 1.0e-11 73.6 36 91.7
Actinidia35087 Actinidia chinensis HOM05D004512 ORTHO05D005355 1.7e-11 72.8 36 91.7
Duzib084G0409 Durio zibethinus HOM05D004512 ORTHO05D005355 2.3e-11 72.4 54 64.8
PRCOL_00001312 Prasinoderma coloniale HOM05D004512 ORTHO05D005355 1.6e-09 66.2 81 42.0


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