Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0004036 Camellia sinensis var. sinensis HOM05D008020 ORTHO05D010140 1.6e-57 226.1 110 100.0
CSS0008844 Camellia sinensis var. sinensis HOM05D008020 ORTHO05D010140 2.3e-27 125.9 84 78.6
Nn6g31749 Nelumbo nucifera HOM05D008020 ORTHO05D010140 7.3e-26 120.9 75 76.0
Rhsim06G0008300 Rhododendron simsii HOM05D008020 ORTHO05D010140 9.5e-26 120.6 75 74.7
Actinidia29785 Actinidia chinensis HOM05D008020 ORTHO05D010140 6.2e-25 117.9 75 73.3
Gorai.002G118600 Gossypium raimondii HOM05D008020 ORTHO05D010140 4.1e-21 105.1 75 65.3
TAR625G0930 Trochodendron aralioides HOM05D008020 ORTHO05D010140 5.4e-21 104.8 67 76.1
Gohir.D01G093200 Gossypium hirsutum HOM05D008020 ORTHO05D010140 7.1e-21 104.4 75 64.0
Thecc.08G057500 Theobroma cacao HOM05D008020 ORTHO05D010140 7.1e-21 104.4 76 67.1
Gohir.A01G106700 Gossypium hirsutum HOM05D008020 ORTHO05D010140 4.6e-20 101.7 75 64.0
Migut.C00948 Erythranthe guttata HOM05D008020 ORTHO05D010140 6.0e-20 101.3 76 68.4
Migut.C00952 Erythranthe guttata HOM05D008020 ORTHO05D010140 6.0e-20 101.3 76 68.4
COL.COLO4_00185 Corchorus olitorius HOM05D008020 ORTHO05D010140 6.6e-19 97.8 79 62.0
Haze_22756 Corylus avellana HOM05D008020 ORTHO05D010140 8.6e-19 97.4 74 62.2
Glyma.06G019000 Glycine max HOM05D008020 ORTHO05D010140 8.6e-19 97.4 73 67.1
CDE05G0785 Ceratophyllum demersum HOM05D008020 ORTHO05D010140 1.1e-18 97.1 74 67.6
COL.COLO4_03997 Corchorus olitorius HOM05D008020 ORTHO05D010140 1.1e-18 97.1 79 62.0
TWI56G1414 Tripterygium wilfordii HOM05D008020 ORTHO05D010140 1.1e-18 97.1 75 62.7
ClCG11G018630 Citrullus lanatus HOM05D008020 ORTHO05D010140 2.5e-18 95.9 75 64.0
Oeu056212.1 Olea europaea HOM05D008020 ORTHO05D010140 3.3e-18 95.5 74 66.2
Medtr3g115170 Medicago truncatula HOM05D008020 ORTHO05D010140 5.6e-18 94.7 73 64.4
Glyma.04G018700 Glycine max HOM05D008020 ORTHO05D010140 7.3e-18 94.4 73 65.8
Manes.05G135100 Manihot esculenta HOM05D008020 ORTHO05D010140 1.2e-17 93.6 76 63.2
PSO210G7351 Papaver somniferum HOM05D008020 ORTHO05D010140 1.6e-17 93.2 76 60.5
VMungo1309G2936 Vigna mungo HOM05D008020 ORTHO05D010140 1.6e-17 93.2 73 65.8
Phvul.009G021900 Phaseolus vulgaris HOM05D008020 ORTHO05D010140 3.6e-17 92.0 73 64.4
Duzib041G0109 Durio zibethinus HOM05D008020 ORTHO05D010140 4.7e-17 91.7 75 60.0
Cfa014061 Carpinus fangiana HOM05D008020 ORTHO05D010140 1.4e-16 90.1 67 62.7
EL10Ac1g01981 Beta vulgaris HOM05D008020 ORTHO05D010140 1.8e-16 89.7 75 60.0
Os03g0133100 Oryza sativa ssp. japonica HOM05D008020 ORTHO05D010140 5.2e-16 88.2 77 62.3
Ca_15441_v3 Cicer arietinum L. HOM05D008020 ORTHO05D010140 8.9e-16 87.4 74 62.2
Lj1g0023017 Lotus japonicus HOM05D008020 ORTHO05D010140 4.4e-15 85.1 73 58.9
Eucgr.F03547 Eucalyptus grandis HOM05D008020 ORTHO05D010140 5.8e-15 84.7 73 60.3
unitig_0.g2104 Utricularia gibba HOM05D008020 ORTHO05D010140 7.6e-15 84.3 73 58.9
Cpa.g.sc26.209 Carica papaya HOM05D008020 ORTHO05D010140 9.9e-15 84.0 76 55.3
Lalb_Chr11g0061691 Lupinus albus HOM05D008020 ORTHO05D010140 9.9e-15 84.0 75 62.7
MELO3C017014.2 Cucumis melo HOM05D008020 ORTHO05D010140 1.7e-14 83.2 75 58.7
Psat5g011800 Pisum sativum HOM05D008020 ORTHO05D010140 2.2e-14 82.8 74 60.8
RcHm_v2.0_Chr6g0304161 Rosa chinensis HOM05D008020 ORTHO05D010140 3.7e-14 82.0 76 57.9
FvH4_2g37570 Fragaria vesca HOM05D008020 ORTHO05D010140 1.1e-13 80.5 84 53.6
ATR0106G002 Amborella trichopoda HOM05D008020 ORTHO05D010140 1.9e-13 79.7 74 56.8
Zm00001eb402590 Zea mays HOM05D008020 ORTHO05D010140 1.9e-13 79.7 78 57.7
ECA232G3495 Erigeron canadensis HOM05D008020 ORTHO05D010140 2.4e-13 79.3 78 57.7
FAN15G1770 Fragaria x ananassa HOM05D008020 ORTHO05D010140 2.4e-13 79.3 83 54.2
SalBow7G2452 Salvia bowleyana HOM05D008020 ORTHO05D010140 2.4e-13 79.3 67 59.7
Sc26g0004630 Simmondsia chinensis HOM05D008020 ORTHO05D010140 4.1e-13 78.6 76 55.3
CARHR284890 Cardamine hirsuta HOM05D008020 ORTHO05D010140 9.2e-13 77.4 92 50.0
MD15G1003000 Malus domestica HOM05D008020 ORTHO05D010140 1.2e-12 77.0 72 59.7
Ah.00g000390 Amaranthus hybridus HOM05D008020 ORTHO05D010140 3.5e-12 75.5 75 54.7
HanXRQChr15g0492771 Helianthus annuus HOM05D008020 ORTHO05D010140 4.6e-12 75.1 75 56.0
BolC3t15181H Brassica oleracea HOM05D008020 ORTHO05D010140 6.0e-12 74.7 92 44.6
Lsat_1_v5_gn_9_44980 Lactuca sativa HOM05D008020 ORTHO05D010140 7.8e-12 74.3 76 56.6
BcaC01g05309 Brassica carinata HOM05D008020 ORTHO05D010140 1.0e-11 73.9 93 45.2
arahy.Tifrunner.gnm1.ann1.IQ4KFY Arachis hypogaea HOM05D008020 ORTHO05D010140 2.3e-11 72.8 76 53.9
Sp7g08310 Schrenkiella parvula HOM05D008020 ORTHO05D010140 3.0e-11 72.4 93 46.2
BcaB01g03440 Brassica carinata HOM05D008020 ORTHO05D010140 3.9e-11 72.0 93 46.2
C03p28110 Brassica napus HOM05D008020 ORTHO05D010140 3.9e-11 72.0 95 44.2
Carub.0008s0691 Capsella rubella HOM05D008020 ORTHO05D010140 5.1e-11 71.6 83 51.8
AT5G42290 Arabidopsis thaliana HOM05D008020 ORTHO05D010140 6.6e-11 71.2 91 49.5
Thhalv10009649m.g Eutrema salsugineum HOM05D008020 ORTHO05D010140 1.5e-10 70.1 93 45.2
AL8G19330 Arabidopsis lyrata HOM05D008020 ORTHO05D010140 4.3e-10 68.6 90 48.9
Atru.chr13.153 Acer truncatum HOM05D008020 ORTHO05D010140 5.6e-10 68.2 64 56.2
Thhalv10028031m.g Eutrema salsugineum HOM05D008020 ORTHO05D010140 7.3e-10 67.8 93 44.1
AUR62036888 Chenopodium quinoa HOM05D008020 ORTHO05D010140 8.1e-09 64.3 68 57.4
AUR62043558 Chenopodium quinoa HOM05D008020 ORTHO05D010140 8.1e-09 64.3 68 57.4
CsaV3_4G037160 Cucumis sativus L. HOM05D008020 ORTHO05D010140 8.1e-09 64.3 66 53.0
SEGI_30631 Sequoiadendron giganteum HOM05D008020 ORTHO05D010140 1.1e-08 63.9 73 47.9
AagrBONN_evm.TU.Sc2ySwM_368.1603 Anthoceros agrestis HOM05D008020 ORTHO05D010140 2.2e-06 56.2 78 44.9
Aa31LG9G12400 Aethionema arabicum HOM05D008020 ORTHO05D010140 3.8e-06 55.5 77 48.1


User provided reference genes

Program Settings