Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0004030 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 7.7e-38 159.8 73 100.0
CiPaw.11G119300 Carya illinoinensis HOM05D000003 ORTHO05D000006 1.8e-10 68.9 81 39.5
CiPaw.04G081300 Carya illinoinensis HOM05D000003 ORTHO05D000006 1.2e-09 66.2 58 46.6
CiPaw.06G025000 Carya illinoinensis HOM05D000003 ORTHO05D000006 2.0e-09 65.5 56 44.6
CiPaw.06G163500 Carya illinoinensis HOM05D000003 ORTHO05D000006 2.6e-09 65.1 72 40.3
QL02p087915 Quercus lobata HOM05D005966 ORTHO05D007584 1.3e-08 62.8 65 40.0
CiPaw.03G074300 Carya illinoinensis HOM05D000003 ORTHO05D000006 1.7e-08 62.4 65 40.0
QL03p009188 Quercus lobata HOM05D000003 ORTHO05D000006 2.9e-08 61.6 64 39.1
CiPaw.06G163400 Carya illinoinensis HOM05D000003 ORTHO05D000006 3.7e-08 61.2 58 37.9
CiPaw.06G165800 Carya illinoinensis HOM05D000003 ORTHO05D000006 3.7e-08 61.2 58 41.4
CiPaw.12G029100 Carya illinoinensis HOM05D000003 ORTHO05D000006 3.7e-08 61.2 58 43.1
CiPaw.01G000700 Carya illinoinensis HOM05D000003 ORTHO05D000006 4.9e-08 60.8 58 39.7
CiPaw.03G068000 Carya illinoinensis HOM05D000003 ORTHO05D000006 4.9e-08 60.8 60 41.7
QL06p035637 Quercus lobata HOM05D000141 ORTHO05D004993 4.9e-08 60.8 62 43.5
SHI34096 Sapria himalayana HOM05D000003 ORTHO05D000004 4.9e-08 60.8 60 41.7
CiPaw.01G031000 Carya illinoinensis HOM05D000003 ORTHO05D000006 6.4e-08 60.5 58 39.7
CiPaw.01G131400 Carya illinoinensis HOM05D000003 ORTHO05D000006 6.4e-08 60.5 58 39.7
CiPaw.01G132400 Carya illinoinensis HOM05D000003 ORTHO05D000006 6.4e-08 60.5 60 40.0
CiPaw.02G060000 Carya illinoinensis HOM05D000003 ORTHO05D000006 6.4e-08 60.5 60 36.7
CiPaw.03G233400 Carya illinoinensis HOM05D000003 ORTHO05D000006 8.3e-08 60.1 60 43.3
CiPaw.06G055400 Carya illinoinensis HOM05D000003 ORTHO05D000006 8.3e-08 60.1 63 36.5
CiPaw.08G116600 Carya illinoinensis HOM05D000003 ORTHO05D000006 8.3e-08 60.1 59 37.3
SHI45326 Sapria himalayana HOM05D000003 ORTHO05D000004 8.3e-08 60.1 60 40.0
SHI47243 Sapria himalayana HOM05D000003 ORTHO05D000004 8.3e-08 60.1 60 40.0
CiPaw.07G074900 Carya illinoinensis HOM05D000003 ORTHO05D000006 1.1e-07 59.7 54 44.4
CiPaw.12G024400 Carya illinoinensis HOM05D000003 ORTHO05D000006 1.1e-07 59.7 60 35.0
QL05p035325 Quercus lobata HOM05D000003 ORTHO05D012891 1.1e-07 59.7 60 38.3
QL05p047572 Quercus lobata HOM05D000003 ORTHO05D000006 1.1e-07 59.7 62 38.7
CiPaw.05G158600 Carya illinoinensis HOM05D000003 ORTHO05D000006 1.4e-07 59.3 58 37.9
CiPaw.08G080100 Carya illinoinensis HOM05D000003 ORTHO05D000006 1.4e-07 59.3 60 40.0
CiPaw.11G178800 Carya illinoinensis HOM05D000003 ORTHO05D000006 1.4e-07 59.3 58 34.5
QL10p054270 Quercus lobata HOM05D000003 ORTHO05D000006 1.4e-07 59.3 58 41.4
QL12p026404 Quercus lobata HOM05D000003 ORTHO05D000004 1.4e-07 59.3 56 44.6
SHI09342 Sapria himalayana HOM05D000003 ORTHO05D000004 1.4e-07 59.3 57 42.1
CiPaw.12G097200 Carya illinoinensis HOM05D000003 ORTHO05D000006 1.9e-07 58.9 60 35.0
CiPaw.15G041600 Carya illinoinensis HOM05D000003 ORTHO05D000006 1.9e-07 58.9 58 37.9
CiPaw.01G225900 Carya illinoinensis HOM05D000003 ORTHO05D000006 2.4e-07 58.5 60 35.0
CiPaw.09G205800 Carya illinoinensis HOM05D000003 ORTHO05D000006 4.1e-07 57.8 53 41.5
CiPaw.01G048000 Carya illinoinensis HOM05D000003 ORTHO05D000006 5.4e-07 57.4 62 35.5
CiPaw.13G179800 Carya illinoinensis HOM05D000003 ORTHO05D000006 5.4e-07 57.4 60 38.3
CiPaw.04G070100 Carya illinoinensis HOM05D000003 ORTHO05D000006 1.2e-06 56.2 58 36.2
CiPaw.11G066600 Carya illinoinensis HOM05D000003 ORTHO05D000006 1.2e-06 56.2 62 32.3
CiPaw.13G122400 Carya illinoinensis HOM05D000003 ORTHO05D000006 1.2e-06 56.2 58 34.5
CiPaw.01G208000 Carya illinoinensis HOM05D000003 ORTHO05D000006 1.6e-06 55.8 58 34.5
CiPaw.08G057000 Carya illinoinensis HOM05D000003 ORTHO05D000006 1.6e-06 55.8 60 33.3
CiPaw.12G035100 Carya illinoinensis HOM05D000003 ORTHO05D000006 1.6e-06 55.8 56 33.9
QL06p033122 Quercus lobata HOM05D000003 ORTHO05D000006 1.6e-06 55.8 56 44.6
CiPaw.01G094800 Carya illinoinensis HOM05D000003 ORTHO05D000006 2.0e-06 55.5 57 36.8
CiPaw.05G173100 Carya illinoinensis HOM05D000003 ORTHO05D000006 2.0e-06 55.5 58 34.5
CiPaw.06G040000 Carya illinoinensis HOM05D000003 ORTHO05D000006 2.0e-06 55.5 64 39.1
CiPaw.03G000600 Carya illinoinensis HOM05D000003 ORTHO05D000006 2.7e-06 55.1 60 31.7
Haze_18362 Corylus avellana HOM05D005002 ORTHO05D006016 2.7e-06 55.1 73 38.4
CiPaw.14G131400 Carya illinoinensis HOM05D000003 ORTHO05D000006 3.5e-06 54.7 71 35.2
QL07p031183 Quercus lobata HOM05D000003 ORTHO05D000004 3.5e-06 54.7 57 42.1
QL06p022817 Quercus lobata HOM05D004997 ORTHO05D005921 4.6e-06 54.3 71 33.8
Hund19901 Selenicereus undatus HOM05D000003 ORTHO05D000006 4.6e-06 54.3 77 32.5
Hund22684 Selenicereus undatus HOM05D001165 ORTHO05D000006 4.6e-06 54.3 77 32.5
CiPaw.07G008100 Carya illinoinensis HOM05D000003 ORTHO05D000006 6.0e-06 53.9 57 33.3
CiPaw.07G216700 Carya illinoinensis HOM05D013882 ORTHO05D000006 6.0e-06 53.9 44 40.9
CiPaw.09G115400 Carya illinoinensis HOM05D000003 ORTHO05D000006 7.8e-06 53.5 60 33.3
Haze_08564 Corylus avellana HOM05D005971 ORTHO05D000006 7.8e-06 53.5 54 42.6
QL01p017079 Quercus lobata HOM05D001657 ORTHO05D001557 7.8e-06 53.5 57 40.4


User provided reference genes

Program Settings