Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0003994 Camellia sinensis var. sinensis HOM05D006291 ORTHO05D007669 1.4e-61 239.6 129 100.0
CSS0013846 Camellia sinensis var. sinensis HOM05D006291 ORTHO05D007669 1.4e-61 239.6 129 100.0
CSS0029803 Camellia sinensis var. sinensis HOM05D006291 ORTHO05D007669 6.3e-59 230.7 135 94.8
Actinidia02463 Actinidia chinensis HOM05D006291 ORTHO05D007669 2.3e-53 212.2 129 89.9
Actinidia38532 Actinidia chinensis HOM05D006291 ORTHO05D007669 3.0e-53 211.8 128 89.1
TAR362G0416 Trochodendron aralioides HOM05D006291 ORTHO05D007669 1.1e-52 209.9 128 86.7
Nn8g40626 Nelumbo nucifera HOM05D006291 ORTHO05D007669 2.6e-52 208.8 128 86.7
GSVIVG01032270001 Vitis vinifera HOM05D006291 ORTHO05D007669 3.3e-52 208.4 128 87.5
Duzib128G2031 Durio zibethinus HOM05D006291 ORTHO05D007669 7.4e-52 207.2 128 86.7
Duzib128G1629 Durio zibethinus HOM05D006291 ORTHO05D007669 2.2e-51 205.7 128 85.9
MSTRG.10473 Avicennia marina HOM05D006291 ORTHO05D007669 2.8e-51 205.3 129 84.5
Manes.02G198400 Manihot esculenta HOM05D006291 ORTHO05D007669 3.7e-51 204.9 128 85.2
COL.COLO4_05650 Corchorus olitorius HOM05D006291 ORTHO05D007669 4.8e-51 204.5 129 85.3
Rhsim01G0107900 Rhododendron simsii HOM05D006291 ORTHO05D007669 4.8e-51 204.5 127 85.8
PGSC0003DMG400013569 Solanum tuberosum HOM05D006291 ORTHO05D007669 6.3e-51 204.1 128 85.2
ECA234G1508 Erigeron canadensis HOM05D006291 ORTHO05D007669 1.8e-50 202.6 128 83.6
SGA_v2.0_scaffold21G09601 Striga asiatica HOM05D006291 ORTHO05D007669 2.4e-50 202.2 129 82.2
HanXRQChr10g0309491 Helianthus annuus HOM05D006291 ORTHO05D007669 3.1e-50 201.8 127 85.0
CAN.G54.10 Capsicum annuum HOM05D006291 ORTHO05D007669 7.0e-50 200.7 128 82.8
Migut.L01922 Erythranthe guttata HOM05D006291 ORTHO05D007669 7.0e-50 200.7 129 82.9
Nitab4.5_0003139g0110 Nicotiana tabacum HOM05D006291 ORTHO05D007669 7.0e-50 200.7 128 82.8
PSO170G1648 Papaver somniferum HOM05D006291 ORTHO05D007669 7.0e-50 200.7 129 82.9
Solyc07g042620.4 Solanum lycopersicum HOM05D006291 ORTHO05D007669 7.0e-50 200.7 126 84.9
Sopen07g022310 Solanum pennellii HOM05D006291 ORTHO05D007669 7.0e-50 200.7 126 84.9
Potri.006G079700 Populus trichocarpa HOM05D006291 ORTHO05D007669 9.1e-50 200.3 128 83.6
PSO063G7114 Papaver somniferum HOM05D006291 ORTHO05D007669 1.6e-49 199.5 129 82.2
Peaxi162Scf00474g00519 Petunia axillaris HOM05D006291 ORTHO05D007669 1.6e-49 199.5 128 82.8
AUR62020734 Chenopodium quinoa HOM05D006291 ORTHO05D007669 2.0e-49 199.1 128 83.6
AUR62027977 Chenopodium quinoa HOM05D006291 ORTHO05D007669 2.0e-49 199.1 128 83.6
PGR044G0028 Punica granatum HOM05D006291 ORTHO05D007669 2.0e-49 199.1 128 82.0
Ciclev10009894m.g Citrus clementina HOM05D006291 ORTHO05D007669 2.6e-49 198.7 128 82.8
Gohir.D05G287200 Gossypium hirsutum HOM05D006291 ORTHO05D007669 2.6e-49 198.7 129 82.2
HanXRQChr12g0358571 Helianthus annuus HOM05D006291 ORTHO05D007669 2.6e-49 198.7 128 82.8
Thecc.10G119800 Theobroma cacao HOM05D006291 ORTHO05D007669 2.6e-49 198.7 128 85.2
CiPaw.16G104700 Carya illinoinensis HOM05D006291 ORTHO05D007669 3.5e-49 198.4 128 83.6
MD13G1231800 Malus domestica HOM05D006291 ORTHO05D007669 5.9e-49 197.6 128 82.8
Cc06_g23850 Coffea canephora HOM05D006291 ORTHO05D007669 7.7e-49 197.2 129 82.2
THA.LOC104826574 Tarenaya hassleriana HOM05D006291 ORTHO05D007669 7.7e-49 197.2 129 82.9
HPP92_021942 Vanilla planifolia HOM05D006291 ORTHO05D007669 7.7e-49 197.2 128 80.5
EL10Ac2g03616 Beta vulgaris HOM05D006291 ORTHO05D007669 1.3e-48 196.4 128 82.0
Prupe.1G063000 Prunus persica HOM05D006291 ORTHO05D007669 1.3e-48 196.4 128 82.8
Sc23g0004310 Simmondsia chinensis HOM05D006291 ORTHO05D007669 1.7e-48 196.1 129 82.2
Gorai.009G302200 Gossypium raimondii HOM05D006291 ORTHO05D007669 2.9e-48 195.3 131 80.9
MD16G1236600 Malus domestica HOM05D006291 ORTHO05D007669 5.0e-48 194.5 128 81.2
Sabra06G0060300 Salix brachista HOM05D006291 ORTHO05D007669 6.5e-48 194.1 128 82.0
HPP92_021968 Vanilla planifolia HOM05D006291 ORTHO05D007669 6.5e-48 194.1 127 79.5
Ah.10g032820 Amaranthus hybridus HOM05D006291 ORTHO05D007669 2.5e-47 192.2 128 79.7
Potri.018G149200 Populus trichocarpa HOM05D006291 ORTHO05D007669 2.5e-47 192.2 128 80.5
Aqoxy7G02914 Aquilegia oxysepala HOM05D006291 ORTHO05D007669 3.2e-47 191.8 129 79.1
arahy.Tifrunner.gnm1.ann1.8H1PJC Arachis hypogaea HOM05D006291 ORTHO05D007669 3.2e-47 191.8 129 79.1
Eucgr.G00957 Eucalyptus grandis HOM05D006291 ORTHO05D007669 3.2e-47 191.8 128 79.7
RcHm_v2.0_Chr4g0397141 Rosa chinensis HOM05D006291 ORTHO05D007669 3.2e-47 191.8 128 80.5
Carub.0013s0004 Capsella rubella HOM05D006291 ORTHO05D007669 9.4e-47 190.3 129 79.8
FAN07G2657 Fragaria x ananassa HOM05D006291 ORTHO05D007669 9.4e-47 190.3 128 79.7
Gohir.A05G286200 Gossypium hirsutum HOM05D006291 ORTHO05D007669 9.4e-47 190.3 122 82.0
CDE02G3570 Ceratophyllum demersum HOM05D006291 ORTHO05D007669 1.2e-46 189.9 125 80.8
CDE06G0918 Ceratophyllum demersum HOM05D006291 ORTHO05D007669 1.6e-46 189.5 127 78.7
unitig_8.g3543 Utricularia gibba HOM05D006291 ORTHO05D007669 1.6e-46 189.5 126 79.4
FvH4_4g05950 Fragaria vesca HOM05D006291 ORTHO05D007669 3.6e-46 188.3 128 78.9
FAN22G0966 Fragaria x ananassa HOM05D006291 ORTHO05D007669 4.7e-46 188.0 128 78.9
Phvul.011G206700 Phaseolus vulgaris HOM05D006291 ORTHO05D007669 8.0e-46 187.2 128 76.6
ATR0580G035 Amborella trichopoda HOM05D006291 ORTHO05D007669 1.0e-45 186.8 126 77.0
AT2G07340 Arabidopsis thaliana HOM05D006291 ORTHO05D007669 1.0e-45 186.8 129 77.5
VMungo1127G1563 Vigna mungo HOM05D006291 ORTHO05D007669 1.4e-45 186.4 128 76.6
Zm00001eb240760 Zea mays HOM05D006291 ORTHO05D007669 1.8e-45 186.0 128 74.2
CANSAT56G3141 Cannabis sativa HOM05D006291 ORTHO05D007669 3.0e-45 185.3 128 75.8
arahy.Tifrunner.gnm1.ann1.SCY2K5 Arachis hypogaea HOM05D006291 ORTHO05D007669 5.2e-45 184.5 128 77.3
TWI63G0490 Tripterygium wilfordii HOM05D006291 ORTHO05D007669 5.2e-45 184.5 128 77.3
Lsat_1_v5_gn_5_80980 Lactuca sativa HOM05D006291 ORTHO05D007669 6.7e-45 184.1 129 80.6
CsaV3_2G009230 Cucumis sativus L. HOM05D006291 ORTHO05D007669 1.2e-44 183.3 123 78.9
Oeu028819.1 Olea europaea HOM05D006291 ORTHO05D007669 2.0e-44 182.6 113 87.6
CANSAT56G1353 Cannabis sativa HOM05D006291 ORTHO05D007669 3.3e-44 181.8 128 75.0
CDE06G1428 Ceratophyllum demersum HOM05D006291 ORTHO05D007669 3.3e-44 181.8 127 78.0
FAN12G2114 Fragaria x ananassa HOM05D006291 ORTHO05D007669 3.3e-44 181.8 130 76.9
Sp6g13890 Schrenkiella parvula HOM05D006291 ORTHO05D007669 3.3e-44 181.8 129 77.5
Glyma.15G235500 Glycine max HOM05D006291 ORTHO05D007669 9.7e-44 180.3 128 73.4
Lj3g0009914 Lotus japonicus HOM05D006291 ORTHO05D007669 9.7e-44 180.3 128 74.2
Thhalv10015026m.g Eutrema salsugineum HOM05D006291 ORTHO05D007669 1.3e-43 179.9 129 76.7
Glyma.13G197100 Glycine max HOM05D006291 ORTHO05D007669 1.3e-43 179.9 128 73.4
Lalb_Chr01g0007741 Lupinus albus HOM05D006291 ORTHO05D007669 1.7e-43 179.5 129 73.6
Dinv26485 Davidia involucrata HOM05D006291 ORTHO05D007669 2.8e-43 178.7 125 80.0
Sed0008839 Sechium edule HOM05D006291 ORTHO05D007669 2.8e-43 178.7 118 81.4
TPR.G27823 Trifolium pratense HOM05D006291 ORTHO05D007669 4.8e-43 177.9 129 72.9
Ca_23954_v3 Cicer arietinum L. HOM05D006291 ORTHO05D007669 1.4e-42 176.4 129 72.9
Hund19355 Selenicereus undatus HOM05D006291 ORTHO05D007669 1.8e-42 176.0 120 80.8
MELO3C003910.2 Cucumis melo HOM05D006291 ORTHO05D007669 2.4e-42 175.6 123 76.4
Psat0s418g0040 Pisum sativum HOM05D006291 ORTHO05D007669 1.2e-41 173.3 129 70.5
Aa31LG8G11030 Aethionema arabicum HOM05D006291 ORTHO05D007669 5.9e-41 171.0 172 59.3
A03p16050 Brassica napus HOM05D006291 ORTHO05D007669 3.8e-40 168.3 129 72.1
BcaB01g04158 Brassica carinata HOM05D006291 ORTHO05D007669 5.0e-40 167.9 137 67.9
BcaC01g06135 Brassica carinata HOM05D006291 ORTHO05D007669 6.5e-40 167.5 129 71.3
C03p18890 Brassica napus HOM05D006291 ORTHO05D007669 6.5e-40 167.5 129 71.3
Ca_23960_v3 Cicer arietinum L. HOM05D006291 ORTHO05D007669 1.1e-39 166.8 121 73.6
DCAR_020455 Daucus carota HOM05D006291 ORTHO05D007669 9.4e-39 163.7 104 86.5
MBI16_g09344_MAGBIO Magnolia biondii HOM05D006291 ORTHO05D007669 9.4e-39 163.7 186 55.9
Actinidia02472 Actinidia chinensis HOM05D006291 ORTHO05D007669 1.0e-37 160.2 107 81.3
TWI32G0019 Tripterygium wilfordii HOM05D006291 ORTHO05D007669 2.8e-35 152.1 116 72.4
Atru.BG.15.p Acer truncatum HOM05D006291 ORTHO05D007669 1.6e-33 146.4 101 80.2
Mapoly0027s0144 Marchantia polymorpha HOM05D006291 ORTHO05D007669 1.6e-33 146.4 128 59.4
Nitab4.5_0000170g0080 Nicotiana tabacum HOM05D006291 ORTHO05D007669 2.0e-33 146.0 96 80.2
Pp3c19_4350 Physcomitrium patens HOM05D006291 ORTHO05D007669 2.7e-33 145.6 128 59.4
AL3G44130 Arabidopsis lyrata HOM05D006291 ORTHO05D007669 1.7e-32 142.9 99 76.8
Dinv12620 Davidia involucrata HOM05D006291 ORTHO05D007669 1.9e-31 139.4 92 82.6
Medtr8g039140 Medicago truncatula HOM05D006291 ORTHO05D007669 2.5e-31 139.0 104 70.2
BcaC04g20645 Brassica carinata HOM05D006291 ORTHO05D007669 5.2e-29 131.3 92 77.2
SMO200G0161 Selaginella moellendorffii HOM05D006291 ORTHO05D007669 2.4e-26 122.5 120 55.0
BraA03t10896Z Brassica rapa HOM05D006291 ORTHO05D007669 7.0e-26 120.9 94 71.3
BolC9t56988H Brassica oleracea HOM05D006291 ORTHO05D007669 1.0e-24 117.1 92 71.7
C09p41100 Brassica napus HOM05D006291 ORTHO05D007669 6.6e-24 114.4 93 69.9
Nitab4.5_0002603g0030 Nicotiana tabacum HOM05D006291 ORTHO05D007669 1.5e-23 113.2 72 80.6
Actinidia07563 Actinidia chinensis HOM05D006291 ORTHO05D007669 6.1e-22 107.8 66 89.4
AagrBONN_evm.TU.Sc2ySwM_362.1895 Anthoceros agrestis HOM05D006291 ORTHO05D007669 1.8e-21 106.3 99 53.5
SalBow3G3584 Salvia bowleyana HOM05D006291 ORTHO05D007669 2.3e-21 105.9 109 60.6
Os02g0462900 Oryza sativa ssp. japonica HOM05D006291 ORTHO05D007669 9.8e-20 100.5 64 75.0
CARHR104040 Cardamine hirsuta HOM05D006291 ORTHO05D007669 1.3e-19 100.1 61 83.6
ClCG11G011210 Citrullus lanatus HOM05D006291 ORTHO05D007669 2.9e-19 99.0 61 80.3
BolC3t14280H Brassica oleracea HOM05D006291 ORTHO05D007669 3.2e-18 95.5 61 78.7
BcaB08g35517 Brassica carinata HOM05D006291 ORTHO05D007669 5.0e-16 88.2 64 71.9
SEGI_05817 Sequoiadendron giganteum HOM05D006291 ORTHO05D007669 1.1e-15 87.0 61 70.5
BolC3t14281H Brassica oleracea HOM05D006291 ORTHO05D007669 1.9e-15 86.3 65 70.8
Cpa.g.sc91.61 Carica papaya HOM05D006291 ORTHO05D007669 1.6e-14 83.2 55 81.8
PRCOL_00006384 Prasinoderma coloniale HOM05D006291 ORTHO05D007669 2.2e-11 72.8 117 35.0
CBR_g16047 Chara braunii HOM05D006291 ORTHO05D007669 4.6e-09 65.1 62 51.6
Haze_19088 Corylus avellana HOM05D000287 ORTHO05D000319 2.3e-08 62.8 41 75.6
MCO11G208 Micromonas commoda HOM05D006291 ORTHO05D007669 5.0e-08 61.6 115 31.3
vmacro20755 Vaccinium macrocarpon HOM05D006291 ORTHO05D007669 6.6e-08 61.2 38 78.9


User provided reference genes

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